Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI17_g08330_MAGBIO Magnolia biondii HOM05D007506 ORTHO05D008409 2.8e-31 138.3 86 100.0
TAR633G2594 Trochodendron aralioides HOM05D007506 ORTHO05D008409 1.1e-11 73.2 84 57.1
CDE12G0642 Ceratophyllum demersum HOM05D007506 ORTHO05D008409 1.9e-11 72.4 86 62.8
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 5.5e-11 70.9 79 60.8
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 5.5e-11 70.9 83 51.8
Nitab4.5_0002586g0040 Nicotiana tabacum HOM05D007506 ORTHO05D008409 1.6e-10 69.3 90 50.0
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 2.1e-10 68.9 53 67.9
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 3.6e-10 68.2 80 60.0
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 1.0e-09 66.6 86 62.8
MD07G1070900 Malus domestica HOM05D007506 ORTHO05D008409 1.4e-09 66.2 52 69.2
CANSAT56G4328 Cannabis sativa HOM05D007506 ORTHO05D008409 1.8e-09 65.9 54 63.0
Migut.F00865 Erythranthe guttata HOM05D007506 ORTHO05D008409 2.3e-09 65.5 63 61.9
Dinv12843 Davidia involucrata HOM05D007506 ORTHO05D008409 5.2e-09 64.3 90 52.2
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 8.9e-09 63.5 60 63.3
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 1.2e-08 63.2 53 67.9
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 1.5e-08 62.8 56 62.5
Peaxi162Scf00519g00621 Petunia axillaris HOM05D007506 ORTHO05D008409 2.0e-08 62.4 87 58.6
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 2.6e-08 62.0 60 61.7
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 5.7e-08 60.8 57 59.6
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 5.7e-08 60.8 77 45.5
GSVIVG01010679001 Vitis vinifera HOM05D007506 ORTHO05D008409 5.7e-08 60.8 71 62.0
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 9.8e-08 60.1 61 62.3
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 9.8e-08 60.1 77 44.2
Cc02_g09560 Coffea canephora HOM05D007506 ORTHO05D008409 2.8e-07 58.5 91 52.7
Manes.10G062500 Manihot esculenta HOM05D007506 ORTHO05D008409 2.8e-07 58.5 46 65.2
PSO801G0534 Papaver somniferum HOM05D007506 ORTHO05D008409 3.7e-07 58.2 81 49.4
TWI38G1985 Tripterygium wilfordii HOM05D007506 ORTHO05D008409 3.7e-07 58.2 86 53.5
Aqoxy7G00781 Aquilegia oxysepala HOM05D007506 ORTHO05D008409 4.9e-07 57.8 62 62.9
Nitab4.5_0010633g0010 Nicotiana tabacum HOM05D007506 ORTHO05D008409 6.3e-07 57.4 62 58.1
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 6.3e-07 57.4 61 57.4
Hund06790 Selenicereus undatus HOM05D007506 ORTHO05D008409 6.3e-07 57.4 82 56.1
HPP92_013812 Vanilla planifolia HOM05D007506 ORTHO05D008409 6.3e-07 57.4 49 61.2
Hma1.2p1_0756F.1_g213210 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.1e-06 56.6 59 59.3
Hma1.2p1_0756F.1_g213215 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.1e-06 56.6 59 59.3
Hma1.2p1_1491F.1_g286710 Hydrangea macrophylla HOM05D007506 ORTHO05D008409 1.1e-06 56.6 59 59.3
Nitab4.5_0005214g0030 Nicotiana tabacum HOM05D007506 ORTHO05D008409 1.1e-06 56.6 62 58.1
Os02g0533800 Oryza sativa ssp. japonica HOM05D007506 ORTHO05D008409 1.8e-06 55.8 53 58.5
Sc20g0001140 Simmondsia chinensis HOM05D007506 ORTHO05D008409 2.4e-06 55.5 91 53.8
CiPaw.13G041100 Carya illinoinensis HOM05D007506 ORTHO05D008409 3.1e-06 55.1 37 70.3
Dinv02210 Davidia involucrata HOM05D007506 ORTHO05D008409 3.1e-06 55.1 56 58.9
VMungo0720G0153 Vigna mungo HOM05D007506 ORTHO05D008409 3.1e-06 55.1 86 50.0
Ca_25653_v3 Cicer arietinum L. HOM05D007506 ORTHO05D008409 4.1e-06 54.7 61 59.0
PSO339G4482 Papaver somniferum HOM05D007506 ORTHO05D008409 4.1e-06 54.7 81 46.9
SalBow3G3829 Salvia bowleyana HOM05D007506 ORTHO05D008409 4.1e-06 54.7 48 56.2
TAR636G0277 Trochodendron aralioides HOM05D007506 ORTHO05D008409 4.1e-06 54.7 86 53.5
Medtr1g111840 Medicago truncatula HOM05D007506 ORTHO05D008409 7.0e-06 53.9 88 46.6
QL04p046828 Quercus lobata HOM05D007506 ORTHO05D008409 7.0e-06 53.9 80 53.8
SEGI_39886 Sequoiadendron giganteum HOM05D007506 ORTHO05D008409 7.0e-06 53.9 48 56.2
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 7.0e-06 53.9 88 53.4


User provided reference genes

Program Settings