Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 2.9e-160 568.5 291 100.0
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 7.6e-121 437.6 230 97.0
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 2.0e-113 412.9 273 78.0
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 1.4e-111 406.8 296 73.6
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 1.9e-111 406.4 299 71.9
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 1.6e-110 403.3 297 71.7
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 7.9e-110 401.0 307 71.0
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 1.8e-109 399.8 301 73.1
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 3.0e-109 399.1 289 73.4
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 6.7e-109 397.9 293 71.0
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 6.7e-109 397.9 278 74.5
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 8.8e-109 397.5 298 71.5
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 1.1e-108 397.1 292 72.6
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 1.1e-108 397.1 269 76.2
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 1.1e-108 397.1 305 69.8
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 5.7e-108 394.8 302 68.9
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 7.4e-108 394.4 318 68.6
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 7.4e-108 394.4 300 71.0
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 9.7e-108 394.0 295 70.5
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 1.7e-107 393.3 284 73.6
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 1.7e-107 393.3 267 74.9
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 3.7e-107 392.1 300 70.7
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 1.1e-106 390.6 309 68.3
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 1.1e-106 390.6 300 68.3
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 1.4e-106 390.2 283 72.4
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 1.8e-106 389.8 302 69.9
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 2.4e-106 389.4 313 66.8
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 2.4e-106 389.4 288 71.2
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 3.1e-106 389.0 308 68.2
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 3.1e-106 389.0 299 69.9
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 6.9e-106 387.9 268 73.1
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 9.1e-106 387.5 230 83.0
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 1.5e-105 386.7 315 67.3
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 2.0e-105 386.3 296 67.2
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 2.0e-105 386.3 296 67.2
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 3.4e-105 385.6 261 74.7
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 7.7e-105 384.4 296 67.9
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 1.7e-104 383.3 238 79.0
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 2.2e-104 382.9 296 69.3
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 2.9e-104 382.5 300 68.7
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 2.9e-104 382.5 268 73.1
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 2.5e-103 379.4 271 71.2
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 2.5e-103 379.4 271 70.8
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 3.2e-103 379.0 291 67.7
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 3.2e-103 379.0 241 76.8
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 3.2e-103 379.0 239 78.7
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 4.2e-103 378.6 298 69.8
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 7.2e-103 377.9 313 65.5
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 9.4e-103 377.5 270 71.9
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 1.2e-102 377.1 282 67.7
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 1.6e-102 376.7 282 70.2
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 2.1e-102 376.3 303 65.3
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 2.1e-102 376.3 303 65.3
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 2.1e-102 376.3 303 65.3
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 2.1e-102 376.3 300 65.3
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 2.1e-102 376.3 299 65.6
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 2.7e-102 375.9 294 66.0
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 2.7e-102 375.9 278 68.7
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 2.7e-102 375.9 239 77.8
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 2.7e-102 375.9 268 70.9
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 6.1e-102 374.8 300 68.0
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 7.9e-102 374.4 264 73.9
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 1.0e-101 374.0 297 67.0
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 1.4e-101 373.6 265 73.2
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.4e-101 373.6 343 62.1
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 1.8e-101 373.2 308 65.9
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 1.8e-101 373.2 258 73.3
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 2.3e-101 372.9 257 74.7
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 2.3e-101 372.9 257 74.3
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 2.3e-101 372.9 320 64.1
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 6.7e-101 371.3 288 67.4
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 8.8e-101 370.9 302 65.2
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 1.1e-100 370.5 298 65.8
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 1.1e-100 370.5 297 68.4
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 3.3e-100 369.0 239 77.4
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 9.7e-100 367.5 310 62.9
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 9.7e-100 367.5 280 68.2
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 9.7e-100 367.5 289 66.1
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 1.3e-99 367.1 273 69.2
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 3.7e-99 365.5 223 78.9
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 7.0e-98 361.3 284 64.8
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 5.9e-97 358.2 299 66.6
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 1.7e-96 356.7 298 66.4
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 2.1e-94 349.7 232 75.0
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 1.1e-92 344.0 267 68.9
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 9.7e-92 340.9 275 68.4
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 3.8e-88 328.9 302 62.6
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 6.5e-88 328.2 260 70.4
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 1.9e-87 326.6 238 66.4
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 7.2e-87 324.7 233 73.8
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 5.3e-82 308.5 245 65.3
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 1.7e-80 303.5 248 62.1
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 1.1e-79 300.8 236 65.3
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 9.4e-79 297.7 231 64.1
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 6.8e-77 291.6 306 55.9
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 4.1e-74 282.3 209 70.3
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 1.9e-71 273.5 214 69.2
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 5.7e-68 261.9 200 67.5
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 1.3e-67 260.8 197 65.5
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 3.2e-66 256.1 219 63.0
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 1.2e-57 227.6 143 77.6
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 1.7e-56 223.8 173 69.4
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 5.2e-53 212.2 197 60.9
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 6.8e-53 211.8 266 48.5
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.2e-44 184.5 119 79.8
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 1.2e-44 184.5 118 74.6
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 1.7e-43 180.6 113 76.1
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 2.2e-43 180.3 113 76.1
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 2.1e-38 163.7 211 44.5
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 3.9e-32 142.9 214 41.1
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 9.6e-31 138.3 77 84.4
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 1.4e-21 107.8 211 36.0
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 1.6e-17 94.4 64 73.4
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 2.1e-17 94.0 237 35.0
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 2.7e-09 67.0 46 71.7
Nn4g24775 Nelumbo nucifera HOM05D006935 ORTHO05D008944 1.9e-07 60.8 33 72.7


User provided reference genes

Program Settings