Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 6.9e-198 693.7 342 100.0
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.3e-147 525.4 326 78.2
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 5.6e-147 524.6 332 76.8
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 3.1e-145 518.8 336 73.5
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 6.8e-145 517.7 333 76.6
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 2.6e-144 515.8 324 75.6
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 2.2e-143 512.7 337 73.3
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 6.4e-143 511.1 337 74.2
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 6.4e-143 511.1 324 75.0
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 4.1e-142 508.4 324 74.4
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.1e-142 508.4 337 72.4
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.6e-141 506.5 324 74.4
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 1.6e-141 506.5 324 74.4
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 2.7e-141 505.8 334 72.8
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 1.0e-140 503.8 325 74.2
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.3e-140 502.7 324 73.5
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 3.9e-140 501.9 339 71.1
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 1.5e-139 500.0 323 73.4
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.5e-139 499.2 341 72.1
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.1e-137 493.8 322 72.7
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.8e-137 493.0 324 72.5
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 1.8e-137 493.0 334 72.5
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 3.1e-137 492.3 324 73.8
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 4.0e-137 491.9 333 72.1
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 8.9e-137 490.7 332 72.9
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.3e-135 486.9 317 74.1
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.3e-135 486.9 325 70.5
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 1.3e-135 486.9 334 70.7
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 3.8e-135 485.3 332 72.3
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 4.9e-135 485.0 334 67.4
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.1e-134 483.8 322 72.0
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.2e-134 482.3 310 75.2
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.2e-133 480.3 334 70.1
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.8e-133 477.6 333 69.4
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.3e-132 476.9 334 68.3
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 3.0e-132 475.7 326 68.4
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 8.6e-132 474.2 318 71.1
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 1.1e-131 473.8 329 68.7
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.1e-131 473.8 325 69.2
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.9e-131 473.0 342 68.7
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.9e-131 473.0 325 68.9
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 2.5e-131 472.6 329 67.5
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 3.3e-131 472.2 334 68.9
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 4.3e-131 471.9 326 69.9
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 9.6e-131 470.7 321 69.8
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.2e-130 470.3 334 67.4
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.8e-130 469.2 324 69.4
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 3.6e-130 468.8 340 68.5
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 3.6e-130 468.8 337 68.8
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 6.2e-130 468.0 340 67.1
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.8e-129 466.5 331 69.5
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 3.1e-129 465.7 334 67.4
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 4.0e-129 465.3 324 67.9
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 4.4e-128 461.8 315 69.8
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 4.4e-128 461.8 324 67.3
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 5.8e-128 461.5 334 69.2
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.9e-128 460.7 324 67.3
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 2.2e-127 459.5 315 69.8
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 2.2e-127 459.5 315 69.8
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 2.2e-127 459.5 343 66.2
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 2.9e-127 459.1 324 67.3
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 3.8e-127 458.8 329 68.7
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 4.9e-127 458.4 315 67.6
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 6.4e-127 458.0 315 69.5
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 6.4e-127 458.0 315 69.5
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 6.4e-127 458.0 315 69.5
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.1e-126 457.2 318 67.3
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 4.2e-126 455.3 333 66.1
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 5.4e-126 454.9 334 63.5
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 7.1e-126 454.5 325 67.4
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 7.1e-126 454.5 318 66.7
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 9.3e-126 454.1 321 67.0
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.2e-125 453.8 312 68.6
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.2e-125 453.8 334 65.0
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 2.1e-125 453.0 335 66.3
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.5e-125 452.2 317 67.8
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 2.3e-124 449.5 320 65.6
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 3.9e-124 448.7 322 67.7
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 8.7e-124 447.6 318 66.0
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 1.1e-123 447.2 314 67.5
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 1.1e-123 447.2 318 66.4
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 5.6e-123 444.9 319 67.4
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 1.1e-121 440.7 328 65.2
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 6.9e-121 438.0 317 70.0
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 9.0e-121 437.6 335 64.2
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 2.6e-120 436.0 334 65.6
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 9.9e-120 434.1 323 65.6
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 1.2e-109 400.6 325 62.2
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 3.5e-109 399.1 333 59.2
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.3e-108 396.4 290 70.0
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 2.3e-108 396.4 310 62.6
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.1e-105 386.0 322 59.3
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 1.0e-103 380.9 310 59.4
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 3.9e-92 342.4 317 53.6
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 1.3e-90 337.4 205 79.5
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 4.1e-89 332.4 246 65.4
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.5e-88 330.5 308 54.9
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.1e-85 320.1 306 52.9
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 6.9e-81 305.1 212 70.3
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.8e-76 290.4 202 67.8
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 3.6e-69 266.2 189 66.1
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 3.7e-66 256.1 167 68.9
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.7e-64 250.0 159 74.8
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 5.9e-64 248.8 176 65.9
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 7.7e-56 221.9 256 49.2
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 2.3e-55 220.3 132 76.5
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.3e-55 220.3 283 43.5
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.5e-51 207.6 156 64.7
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.5e-48 196.4 123 76.4
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.0e-47 194.9 149 64.4
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 8.6e-39 165.2 133 62.4
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 1.4e-36 157.9 88 80.7
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.4e-27 126.3 117 55.6
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.1e-23 112.8 108 50.9
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 5.8e-19 99.4 243 33.3
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 5.8e-19 99.4 72 66.7
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.4e-12 77.4 70 51.4
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 5.3e-12 76.3 174 30.5
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 6.4e-10 69.3 173 31.8
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 1.7e-07 61.2 250 28.8
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 1.7e-07 61.2 207 27.1
MCO05G745 Micromonas commoda HOM05D006598 ORTHO05D269324 4.3e-06 56.6 175 29.7


User provided reference genes

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