Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI16_g26460_MAGBIO Magnolia biondii HOM05D001277 ORTHO05D000950 8.7e-38 159.8 82 100.0
MBI16_g32805_MAGBIO Magnolia biondii HOM05D001277 ORTHO05D000950 3.1e-19 98.2 51 98.0
MBI16_g26458_MAGBIO Magnolia biondii HOM05D001277 ORTHO05D000950 3.2e-16 88.2 51 86.3
MBI10_g11074_MAGBIO Magnolia biondii HOM05D001277 ORTHO05D000950 1.1e-11 73.2 51 66.7
TAR629G0294 Trochodendron aralioides HOM05D001277 ORTHO05D000950 1.0e-09 66.6 50 62.0
Thecc.03G010300 Theobroma cacao HOM05D001277 ORTHO05D000950 1.7e-09 65.9 49 57.1
Peaxi162Scf00017g02837 Petunia axillaris HOM05D001277 ORTHO05D000950 2.9e-09 65.1 48 58.3
GSVIVG01007772001 Vitis vinifera HOM05D001277 ORTHO05D000950 2.9e-09 65.1 50 64.0
TAR371G0133 Trochodendron aralioides HOM05D001277 ORTHO05D000950 5.0e-09 64.3 50 64.0
Manes.06G103800 Manihot esculenta HOM05D001277 ORTHO05D000950 6.5e-09 63.9 51 54.9
COL.COLO4_07560 Corchorus olitorius HOM05D001277 ORTHO05D000950 8.4e-09 63.5 50 54.0
Dinv20667 Davidia involucrata HOM05D001277 ORTHO05D000950 8.4e-09 63.5 50 58.0
Glyma.05G036800 Glycine max HOM05D001277 ORTHO05D000950 8.4e-09 63.5 50 60.0
Manes.14G067000 Manihot esculenta HOM05D001277 ORTHO05D000950 8.4e-09 63.5 51 56.9
Gohir.D02G117600 Gossypium hirsutum HOM05D001277 ORTHO05D000950 1.1e-08 63.2 50 54.0
Gorai.005G136000 Gossypium raimondii HOM05D001277 ORTHO05D000950 1.1e-08 63.2 50 54.0
Nitab4.5_0001724g0100 Nicotiana tabacum HOM05D001277 ORTHO05D000950 1.1e-08 63.2 46 63.0
Duzib205G0114 Durio zibethinus HOM05D001277 ORTHO05D000950 1.4e-08 62.8 50 52.0
Potri.012G079100 Populus trichocarpa HOM05D001277 ORTHO05D000950 1.4e-08 62.8 51 54.9
Sabra12G0056700 Salix brachista HOM05D001277 ORTHO05D000950 1.4e-08 62.8 51 56.9
CSS0018561 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 1.9e-08 62.4 47 61.7
Glyma.17G090500 Glycine max HOM05D001277 ORTHO05D000950 2.5e-08 62.0 45 62.2
MD14G1182700 Malus domestica HOM05D001277 ORTHO05D000950 2.5e-08 62.0 51 58.8
Nitab4.5_0000852g0080 Nicotiana tabacum HOM05D001277 ORTHO05D000950 2.5e-08 62.0 48 62.5
Gohir.A03G096500 Gossypium hirsutum HOM05D001277 ORTHO05D000950 3.2e-08 61.6 50 52.0
Lj4g0004622 Lotus japonicus HOM05D001277 ORTHO05D000950 3.2e-08 61.6 45 62.2
Potri.015G074500 Populus trichocarpa HOM05D001277 ORTHO05D000950 3.2e-08 61.6 51 54.9
Ciclev10022480m.g Citrus clementina HOM05D001277 ORTHO05D000950 4.2e-08 61.2 45 60.0
Duzib068G1427 Durio zibethinus HOM05D001277 ORTHO05D000950 4.2e-08 61.2 49 53.1
Atru.chr9.2450 Acer truncatum HOM05D001277 ORTHO05D000950 5.5e-08 60.8 49 61.2
Hma1.2p1_0176F.1_g077580 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 5.5e-08 60.8 50 54.0
Hma1.2p1_0176F.1_g077610 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 5.5e-08 60.8 51 52.9
Phvul.003G199500 Phaseolus vulgaris HOM05D001277 ORTHO05D000950 5.5e-08 60.8 45 60.0
VMungo1215G1091 Vigna mungo HOM05D001277 ORTHO05D000950 5.5e-08 60.8 45 60.0
CSS0029869 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 7.1e-08 60.5 45 62.2
Cpa.g.sc124.41 Carica papaya HOM05D001277 ORTHO05D000950 7.1e-08 60.5 81 39.5
Sabra15G0098400 Salix brachista HOM05D001277 ORTHO05D000950 7.1e-08 60.5 51 52.9
Hma1.2p1_0176F.1_g077590 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 9.3e-08 60.1 51 52.9
Actinidia04986 Actinidia chinensis HOM05D001277 ORTHO05D000950 1.6e-07 59.3 60 48.3
Actinidia04988 Actinidia chinensis HOM05D001277 ORTHO05D000950 1.6e-07 59.3 60 48.3
Ciclev10024201m.g Citrus clementina HOM05D001277 ORTHO05D000950 1.6e-07 59.3 45 60.0
Glyma.04G182600 Glycine max HOM05D001277 ORTHO05D000950 1.6e-07 59.3 45 60.0
Hma1.2p1_2175F.1_g316090 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 1.6e-07 59.3 51 51.0
Solyc03g114230.2 Solanum lycopersicum HOM05D001277 ORTHO05D000950 1.6e-07 59.3 45 62.2
Sopen03g033330 Solanum pennellii HOM05D001277 ORTHO05D000950 1.6e-07 59.3 45 62.2
vmacro16602 Vaccinium macrocarpon HOM05D001277 ORTHO05D000950 1.6e-07 59.3 44 59.1
Actinidia33058 Actinidia chinensis HOM05D001277 ORTHO05D000950 2.1e-07 58.9 45 60.0
CiPaw.12G025400 Carya illinoinensis HOM05D001277 ORTHO05D000950 2.7e-07 58.5 45 55.6
DCAR_026126 Daucus carota HOM05D001277 ORTHO05D000950 2.7e-07 58.5 48 56.2
Manes.13G145600 Manihot esculenta HOM05D001277 ORTHO05D000950 2.7e-07 58.5 46 50.0
Nn3g16898 Nelumbo nucifera HOM05D001277 ORTHO05D000950 2.7e-07 58.5 45 60.0
Prupe.5G175200 Prunus persica HOM05D001277 ORTHO05D000950 2.7e-07 58.5 45 60.0
VMungo1309G3071 Vigna mungo HOM05D001277 ORTHO05D000950 2.7e-07 58.5 45 60.0
CAN.G781.19 Capsicum annuum HOM05D001277 ORTHO05D000950 3.5e-07 58.2 46 54.3
Dinv24854 Davidia involucrata HOM05D001277 ORTHO05D000950 3.5e-07 58.2 51 56.9
Glyma.U035800 Glycine max HOM05D001277 ORTHO05D000950 3.5e-07 58.2 45 57.8
Nn3g16897 Nelumbo nucifera HOM05D001277 ORTHO05D000950 3.5e-07 58.2 48 56.2
Prupe.5G175300 Prunus persica HOM05D001277 ORTHO05D000950 3.5e-07 58.2 45 57.8
Thecc.02G248700 Theobroma cacao HOM05D001277 ORTHO05D000950 3.5e-07 58.2 46 54.3
CiPaw.12G025600 Carya illinoinensis HOM05D001277 ORTHO05D000950 6.1e-07 57.4 45 57.8
Nn1g06509 Nelumbo nucifera HOM05D001277 ORTHO05D000950 6.1e-07 57.4 51 52.9
Cfa019101 Carpinus fangiana HOM05D001277 ORTHO05D000950 7.9e-07 57.0 50 48.0
DCAR_010194 Daucus carota HOM05D001277 ORTHO05D000950 7.9e-07 57.0 48 54.2
FAN08G2507 Fragaria x ananassa HOM05D001277 ORTHO05D000950 7.9e-07 57.0 51 52.9
FAN13G2787 Fragaria x ananassa HOM05D001277 ORTHO05D000950 7.9e-07 57.0 51 52.9
Phvul.009G179600 Phaseolus vulgaris HOM05D001277 ORTHO05D000950 7.9e-07 57.0 45 55.6
Aqoxy3G01012 Aquilegia oxysepala HOM05D001277 ORTHO05D000950 1.0e-06 56.6 49 53.1
COL.COLO4_36774 Corchorus olitorius HOM05D001277 ORTHO05D000950 1.0e-06 56.6 46 52.2
MD06G1176300 Malus domestica HOM05D001277 ORTHO05D000950 1.0e-06 56.6 51 52.9
QL10p011975 Quercus lobata HOM05D001277 ORTHO05D000950 1.0e-06 56.6 51 45.1
Solyc03g114237.1 Solanum lycopersicum HOM05D001277 ORTHO05D000950 1.0e-06 56.6 46 52.2
PGSC0003DMG400024597 Solanum tuberosum HOM05D001277 ORTHO05D000950 1.0e-06 56.6 45 57.8
TAR622G0406 Trochodendron aralioides HOM05D001277 ORTHO05D000950 1.0e-06 56.6 46 54.3
Actinidia04985 Actinidia chinensis HOM05D001277 ORTHO05D000950 1.3e-06 56.2 45 55.6
Haze_07499 Corylus avellana HOM05D001277 ORTHO05D000950 1.3e-06 56.2 50 52.0
Glyma.13G238300 Glycine max HOM05D001277 ORTHO05D000950 1.3e-06 56.2 50 56.0
PGSC0003DMG400024598 Solanum tuberosum HOM05D001277 ORTHO05D000950 1.3e-06 56.2 44 56.8
Actinidia07314 Actinidia chinensis HOM05D001277 ORTHO05D000950 1.8e-06 55.8 45 55.6
Haze_07498 Corylus avellana HOM05D001277 ORTHO05D000950 1.8e-06 55.8 50 46.0
Duzib248G0856 Durio zibethinus HOM05D001277 ORTHO05D000950 1.8e-06 55.8 46 52.2
RcHm_v2.0_Chr7g0193761 Rosa chinensis HOM05D001277 ORTHO05D000950 1.8e-06 55.8 51 51.0
TAR680G0004 Trochodendron aralioides HOM05D001277 ORTHO05D000950 1.8e-06 55.8 46 54.3
Manes.12G088914 Manihot esculenta HOM05D001277 ORTHO05D000950 2.3e-06 55.5 48 50.0
Manes.12G088952 Manihot esculenta HOM05D001277 ORTHO05D000950 2.3e-06 55.5 48 50.0
Rhsim12G0163800 Rhododendron simsii HOM05D001277 ORTHO05D000950 2.3e-06 55.5 46 52.2
Actinidia07315 Actinidia chinensis HOM05D001277 ORTHO05D000950 3.0e-06 55.1 45 53.3
CANSAT80G1563 Cannabis sativa HOM05D001277 ORTHO05D000950 3.0e-06 55.1 44 54.5
Cfa019102 Carpinus fangiana HOM05D001277 ORTHO05D000950 3.0e-06 55.1 50 50.0
FvH4_5g05180 Fragaria vesca HOM05D001277 ORTHO05D000950 3.0e-06 55.1 51 51.0
FAN18G1626 Fragaria x ananassa HOM05D001277 ORTHO05D000950 3.0e-06 55.1 51 51.0
Potri.011G053400 Populus trichocarpa HOM05D001277 ORTHO05D000950 3.0e-06 55.1 49 55.1
Rhsim08G0170900 Rhododendron simsii HOM05D001277 ORTHO05D000950 3.0e-06 55.1 46 56.5
Sabra11G0037200 Salix brachista HOM05D001277 ORTHO05D000950 3.0e-06 55.1 49 55.1
vmacro16603 Vaccinium macrocarpon HOM05D001277 ORTHO05D000950 3.0e-06 55.1 45 53.3
VMungo0540G1089 Vigna mungo HOM05D001277 ORTHO05D000950 3.0e-06 55.1 50 54.0
CiPaw.12G025500 Carya illinoinensis HOM05D001277 ORTHO05D000950 3.9e-06 54.7 45 55.6
Eucgr.K02849 Eucalyptus grandis HOM05D001277 ORTHO05D000950 3.9e-06 54.7 50 54.0
FAN04G0760 Fragaria x ananassa HOM05D001277 ORTHO05D000950 3.9e-06 54.7 51 51.0
PGR083G0118 Punica granatum HOM05D001277 ORTHO05D000950 3.9e-06 54.7 50 52.0
CSS0009069 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 5.1e-06 54.3 50 56.0
CAN.G781.21 Capsicum annuum HOM05D001277 ORTHO05D000950 5.1e-06 54.3 44 50.0
Solyc03g114233.1 Solanum lycopersicum HOM05D001277 ORTHO05D000950 5.1e-06 54.3 43 58.1
Dinv09151 Davidia involucrata HOM05D001277 ORTHO05D000950 6.7e-06 53.9 51 52.9
Dinv17320 Davidia involucrata HOM05D001277 ORTHO05D000950 6.7e-06 53.9 50 54.0
MBI07_g30190_MAGBIO Magnolia biondii HOM05D001277 ORTHO05D000950 6.7e-06 53.9 67 49.3
Nitab4.5_0000852g0070 Nicotiana tabacum HOM05D001277 ORTHO05D000950 6.7e-06 53.9 49 57.1


User provided reference genes

Program Settings