Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI16_g23060_MAGBIO Magnolia biondii HOM05D005090 ORTHO05D006142 1.1e-87 326.6 164 100.0
Aqoxy6G01237 Aquilegia oxysepala HOM05D005090 ORTHO05D006142 3.6e-59 231.9 151 76.8
TAR376G0388 Trochodendron aralioides HOM05D005090 ORTHO05D006142 2.0e-54 216.1 170 68.8
CiPaw.15G053600 Carya illinoinensis HOM05D005090 ORTHO05D006142 3.3e-52 208.8 167 66.5
GSVIVG01009445001 Vitis vinifera HOM05D005090 ORTHO05D006142 5.5e-52 208.0 150 69.3
MD08G1095400 Malus domestica HOM05D005090 ORTHO05D006142 7.2e-52 207.6 167 66.5
Cfa009959 Carpinus fangiana HOM05D005090 ORTHO05D006142 1.2e-51 206.8 167 66.5
Nn1g04760 Nelumbo nucifera HOM05D005090 ORTHO05D006142 1.2e-51 206.8 179 63.1
Actinidia01086 Actinidia chinensis HOM05D005090 ORTHO05D006142 2.1e-51 206.1 162 67.9
Nn5g30374 Nelumbo nucifera HOM05D005090 ORTHO05D006142 8.0e-51 204.1 171 67.3
Gohir.D06G019036 Gossypium hirsutum HOM05D005090 ORTHO05D006142 1.8e-50 203.0 147 68.7
Gorai.010G022500 Gossypium raimondii HOM05D005090 ORTHO05D006142 1.8e-50 203.0 147 68.7
Ciclev10002608m.g Citrus clementina HOM05D005090 ORTHO05D006142 2.3e-50 202.6 159 63.5
MD15G1077900 Malus domestica HOM05D005090 ORTHO05D006142 4.0e-50 201.8 159 67.3
Rhsim06G0054600 Rhododendron simsii HOM05D005090 ORTHO05D006142 4.0e-50 201.8 149 71.1
Atru.chr13.741 Acer truncatum HOM05D005090 ORTHO05D006142 8.9e-50 200.7 162 64.8
Prupe.1G431400 Prunus persica HOM05D005090 ORTHO05D006142 1.2e-49 200.3 165 64.2
CANSAT25G3428 Cannabis sativa HOM05D005090 ORTHO05D006142 1.5e-49 199.9 146 69.2
PSO675G4571 Papaver somniferum HOM05D005090 ORTHO05D006142 1.5e-49 199.9 174 63.2
Actinidia22653 Actinidia chinensis HOM05D005090 ORTHO05D006142 2.0e-49 199.5 162 65.4
ClCG05G020140 Citrullus lanatus HOM05D005090 ORTHO05D006142 2.0e-49 199.5 161 65.2
Cpa.g.sc21.163 Carica papaya HOM05D005090 ORTHO05D006142 3.4e-49 198.7 164 64.0
PSO541G4295 Papaver somniferum HOM05D005090 ORTHO05D006142 3.4e-49 198.7 174 63.2
FvH4_2g33950 Fragaria vesca HOM05D005090 ORTHO05D006142 4.4e-49 198.4 171 62.6
FAN24G0633 Fragaria x ananassa HOM05D005090 ORTHO05D006142 4.4e-49 198.4 171 62.6
Potri.014G024500 Populus trichocarpa HOM05D005090 ORTHO05D006142 4.4e-49 198.4 143 71.3
Duzib093G0455 Durio zibethinus HOM05D005090 ORTHO05D006142 5.7e-49 198.0 163 65.0
FAN20G1047 Fragaria x ananassa HOM05D005090 ORTHO05D006142 5.7e-49 198.0 171 62.6
Duzib041G0676 Durio zibethinus HOM05D005090 ORTHO05D006142 7.5e-49 197.6 151 66.9
FAN27G2315 Fragaria x ananassa HOM05D005090 ORTHO05D006142 7.5e-49 197.6 171 62.6
Manes.18G040700 Manihot esculenta HOM05D005090 ORTHO05D006142 1.7e-48 196.4 170 62.4
Phvul.001G024300 Phaseolus vulgaris HOM05D005090 ORTHO05D006142 1.7e-48 196.4 148 67.6
RcHm_v2.0_Chr6g0308461 Rosa chinensis HOM05D005090 ORTHO05D006142 1.7e-48 196.4 171 62.0
Ca_13273_v3 Cicer arietinum L. HOM05D005090 ORTHO05D006142 2.8e-48 195.7 149 66.4
FAN15G0851 Fragaria x ananassa HOM05D005090 ORTHO05D006142 3.7e-48 195.3 171 62.6
MSTRG.1060 Avicennia marina HOM05D005090 ORTHO05D006142 6.3e-48 194.5 146 68.5
Glyma.14G085300 Glycine max HOM05D005090 ORTHO05D006142 1.8e-47 193.0 148 66.2
Lj5g0006850 Lotus japonicus HOM05D005090 ORTHO05D006142 4.1e-47 191.8 146 65.8
Sabra14G0016700 Salix brachista HOM05D005090 ORTHO05D006142 7.0e-47 191.0 143 68.5
VMungo0647G1453 Vigna mungo HOM05D005090 ORTHO05D006142 1.2e-46 190.3 167 61.7
Glyma.17G239400 Glycine max HOM05D005090 ORTHO05D006142 1.6e-46 189.9 148 65.5
TWI36G0811 Tripterygium wilfordii HOM05D005090 ORTHO05D006142 1.6e-46 189.9 171 62.6
Eucgr.F02314 Eucalyptus grandis HOM05D005090 ORTHO05D006142 2.0e-46 189.5 139 69.1
Sc15g0005920 Simmondsia chinensis HOM05D005090 ORTHO05D006142 2.0e-46 189.5 146 65.8
CANSAT56G0556 Cannabis sativa HOM05D005090 ORTHO05D006142 3.5e-46 188.7 177 61.6
Potri.002G123400 Populus trichocarpa HOM05D005090 ORTHO05D006142 3.5e-46 188.7 146 65.8
CSS0005413 Camellia sinensis var. sinensis HOM05D005090 ORTHO05D006142 4.5e-46 188.3 158 65.8
Duzib116G0889 Durio zibethinus HOM05D005090 ORTHO05D006142 4.5e-46 188.3 146 65.8
Oeu009772.1 Olea europaea HOM05D005090 ORTHO05D006142 4.5e-46 188.3 163 62.0
arahy.Tifrunner.gnm1.ann1.LLUM42 Arachis hypogaea HOM05D005090 ORTHO05D006142 5.9e-46 188.0 151 64.2
arahy.Tifrunner.gnm1.ann1.Q1327U Arachis hypogaea HOM05D005090 ORTHO05D006142 5.9e-46 188.0 151 64.2
ATR0762G034 Amborella trichopoda HOM05D005090 ORTHO05D006142 1.0e-45 187.2 150 64.7
CAN.G1030.34 Capsicum annuum HOM05D005090 ORTHO05D006142 2.9e-45 185.7 148 64.2
SalBow7G1773 Salvia bowleyana HOM05D005090 ORTHO05D006142 2.9e-45 185.7 149 61.7
Sed0019095 Sechium edule HOM05D005090 ORTHO05D006142 2.9e-45 185.7 158 62.0
Lalb_Chr22g0354971 Lupinus albus HOM05D005090 ORTHO05D006142 6.6e-45 184.5 157 61.8
Sed0001046 Sechium edule HOM05D005090 ORTHO05D006142 6.6e-45 184.5 150 63.3
Medtr1g018930 Medicago truncatula HOM05D005090 ORTHO05D006142 8.6e-45 184.1 147 62.6
Nitab4.5_0004730g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 8.6e-45 184.1 162 60.5
MELO3C016776.2 Cucumis melo HOM05D005090 ORTHO05D006142 1.9e-44 183.0 162 61.7
HanXRQChr04g0103471 Helianthus annuus HOM05D005090 ORTHO05D006142 1.9e-44 183.0 146 63.7
PGR031G1041 Punica granatum HOM05D005090 ORTHO05D006142 1.9e-44 183.0 158 62.0
Nitab4.5_0002548g0010 Nicotiana tabacum HOM05D005090 ORTHO05D006142 2.5e-44 182.6 160 60.0
AUR62036618 Chenopodium quinoa HOM05D005090 ORTHO05D006142 3.3e-44 182.2 156 62.2
Peaxi162Scf00121g00414 Petunia axillaris HOM05D005090 ORTHO05D006142 3.3e-44 182.2 147 62.6
Haze_18058 Corylus avellana HOM05D005090 ORTHO05D006142 5.6e-44 181.4 232 47.8
Haze_18064 Corylus avellana HOM05D005090 ORTHO05D006142 1.6e-43 179.9 123 71.5
Hma1.2p1_0634F.1_g193080 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 1.6e-43 179.9 168 58.3
PGSC0003DMG400007949 Solanum tuberosum HOM05D005090 ORTHO05D006142 1.6e-43 179.9 148 61.5
Hma1.2p1_0360F.1_g135840 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 2.1e-43 179.5 157 61.1
Sopen04g032180 Solanum pennellii HOM05D005090 ORTHO05D006142 2.1e-43 179.5 174 55.2
Solyc04g078600.3 Solanum lycopersicum HOM05D005090 ORTHO05D006142 2.8e-43 179.1 154 59.1
DCAR_019423 Daucus carota HOM05D005090 ORTHO05D006142 1.0e-42 177.2 159 57.2
Aa31LG3G14010 Aethionema arabicum HOM05D005090 ORTHO05D006142 1.4e-42 176.8 141 61.0
Cc10_g04780 Coffea canephora HOM05D005090 ORTHO05D006142 1.4e-42 176.8 147 60.5
Manes.05G176500 Manihot esculenta HOM05D005090 ORTHO05D006142 2.3e-42 176.0 123 70.7
Hund05334 Selenicereus undatus HOM05D005090 ORTHO05D006142 5.2e-42 174.9 159 60.4
SEGI_34157 Sequoiadendron giganteum HOM05D005090 ORTHO05D006142 5.2e-42 174.9 163 59.5
Lsat_1_v5_gn_1_22101 Lactuca sativa HOM05D005090 ORTHO05D006142 8.9e-42 174.1 160 58.1
A06p39530 Brassica napus HOM05D005090 ORTHO05D006142 2.6e-41 172.6 139 61.2
BraA06t26868Z Brassica rapa HOM05D005090 ORTHO05D006142 2.6e-41 172.6 139 61.2
Thecc.08G002400 Theobroma cacao HOM05D005090 ORTHO05D006142 3.4e-41 172.2 160 56.9
COL.COLO4_10129 Corchorus olitorius HOM05D005090 ORTHO05D006142 4.4e-41 171.8 194 52.6
C07p38740 Brassica napus HOM05D005090 ORTHO05D006142 5.8e-41 171.4 139 61.2
BolC7t44393H Brassica oleracea HOM05D005090 ORTHO05D006142 5.8e-41 171.4 139 61.2
THA.LOC104807114 Tarenaya hassleriana HOM05D005090 ORTHO05D006142 5.8e-41 171.4 148 59.5
Thhalv10005720m.g Eutrema salsugineum HOM05D005090 ORTHO05D006142 9.8e-41 170.6 142 59.9
Sp2g18330 Schrenkiella parvula HOM05D005090 ORTHO05D006142 1.3e-40 170.2 143 58.7
CDE06G1995 Ceratophyllum demersum HOM05D005090 ORTHO05D006142 2.2e-40 169.5 158 58.2
EL10As7g23773 Beta vulgaris HOM05D005090 ORTHO05D006142 6.4e-40 167.9 147 60.5
Psat6g014640 Pisum sativum HOM05D005090 ORTHO05D006142 6.4e-40 167.9 148 59.5
HanXRQChr05g0150671 Helianthus annuus HOM05D005090 ORTHO05D006142 1.1e-39 167.2 161 55.9
AT5G47830 Arabidopsis thaliana HOM05D005090 ORTHO05D006142 1.8e-39 166.4 171 53.2
CARHR184350 Cardamine hirsuta HOM05D005090 ORTHO05D006142 1.8e-39 166.4 170 54.1
AL8G19800 Arabidopsis lyrata HOM05D005090 ORTHO05D006142 3.2e-39 165.6 169 55.0
Carub.0008s0737 Capsella rubella HOM05D005090 ORTHO05D006142 5.4e-39 164.9 169 53.8
AUR62038807 Chenopodium quinoa HOM05D005090 ORTHO05D006142 1.2e-38 163.7 146 59.6
BolC2t11671H Brassica oleracea HOM05D005090 ORTHO05D006142 1.6e-38 163.3 163 54.6
unitig_26.g9810 Utricularia gibba HOM05D005090 ORTHO05D006142 1.6e-38 163.3 149 60.4
BcaC03g17615 Brassica carinata HOM05D005090 ORTHO05D006142 2.7e-38 162.5 162 53.1
ECA247G1795 Erigeron canadensis HOM05D005090 ORTHO05D006142 2.7e-38 162.5 135 60.0
BcaB07g30052 Brassica carinata HOM05D005090 ORTHO05D006142 4.6e-38 161.8 149 55.7
MD17G1062600 Malus domestica HOM05D005090 ORTHO05D006142 4.6e-38 161.8 152 61.8
C02p56140 Brassica napus HOM05D005090 ORTHO05D006142 6.0e-38 161.4 162 53.1
SGA_v2.0_scaffold197G41030 Striga asiatica HOM05D005090 ORTHO05D006142 1.7e-37 159.8 200 47.0
A02p37140 Brassica napus HOM05D005090 ORTHO05D006142 2.3e-37 159.5 162 52.5
BraA02t08700Z Brassica rapa HOM05D005090 ORTHO05D006142 2.3e-37 159.5 162 52.5
Lj4C63T3 Lonicera japonica HOM05D005090 ORTHO05D006142 3.0e-37 159.1 120 64.2
Oeu037620.1 Olea europaea HOM05D005090 ORTHO05D006142 3.0e-37 159.1 120 64.2
ECA246G0692 Erigeron canadensis HOM05D005090 ORTHO05D006142 4.3e-36 155.2 158 52.5
Migut.C00536 Erythranthe guttata HOM05D005090 ORTHO05D006142 3.6e-35 152.1 152 55.3
Os02g0158600 Oryza sativa ssp. japonica HOM05D005090 ORTHO05D006142 4.7e-35 151.8 141 54.6
Zm00001eb232600 Zea mays HOM05D005090 ORTHO05D006142 8.0e-35 151.0 139 56.1
TAR628G0694 Trochodendron aralioides HOM05D005090 ORTHO05D006142 2.0e-33 146.4 115 67.0
Pp3c14_4680 Physcomitrium patens HOM05D005090 ORTHO05D006142 5.4e-31 138.3 151 47.0
Pp3c14_4740 Physcomitrium patens HOM05D005090 ORTHO05D006142 5.4e-31 138.3 151 47.0
BcaB04g18280 Brassica carinata HOM05D005090 ORTHO05D006142 7.0e-31 137.9 116 57.8
BcaB05g23208 Brassica carinata HOM05D005090 ORTHO05D006142 9.2e-31 137.5 120 55.8
Nitab4.5_0012973g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 9.2e-31 137.5 123 57.7
vmacro04554 Vaccinium macrocarpon HOM05D005090 ORTHO05D006142 1.2e-30 137.1 254 36.2
EL10As7g23770 Beta vulgaris HOM05D005090 ORTHO05D006142 2.1e-30 136.3 149 51.7
Mapoly0121s0046 Marchantia polymorpha HOM05D005090 ORTHO05D006142 5.0e-29 131.7 158 44.9
Pp3c10_3910 Physcomitrium patens HOM05D005090 ORTHO05D006142 5.0e-29 131.7 158 45.6
AagrBONN_evm.TU.Sc2ySwM_340.334 Anthoceros agrestis HOM05D005090 ORTHO05D006142 9.5e-28 127.5 146 46.6
CsaV3_4G034590 Cucumis sativus L. HOM05D005090 ORTHO05D006142 1.1e-26 124.0 162 47.5
EL10As7g23766 Beta vulgaris HOM05D005090 ORTHO05D006142 5.8e-25 118.2 126 52.4
EL10As7g23771 Beta vulgaris HOM05D005090 ORTHO05D006142 5.8e-25 118.2 126 52.4
Nitab4.5_0005621g0060 Nicotiana tabacum HOM05D005090 ORTHO05D006142 8.3e-24 114.4 104 56.7
SMO140G0004 Selaginella moellendorffii HOM05D002426 ORTHO05D002873 7.1e-23 111.3 181 38.7
AUR62044449 Chenopodium quinoa HOM05D005090 ORTHO05D006142 1.0e-21 107.5 120 53.3
Sc02g0007470 Simmondsia chinensis HOM05D005090 ORTHO05D006142 6.6e-21 104.8 141 42.6
BcaB01g00393 Brassica carinata HOM05D005090 ORTHO05D006142 4.4e-17 92.0 102 46.1
CBR_g12766 Chara braunii HOM05D005090 ORTHO05D006142 5.8e-17 91.7 168 38.1
EL10As7g23765 Beta vulgaris HOM05D005090 ORTHO05D006142 2.9e-16 89.4 108 48.1
BcaC02g09103 Brassica carinata HOM05D005090 ORTHO05D006142 1.2e-11 73.9 83 50.6
MD06G1210300 Malus domestica HOM05D005090 ORTHO05D006142 1.2e-11 73.9 78 56.4
C04p38460 Brassica napus HOM05D005090 ORTHO05D006142 1.4e-10 70.5 83 49.4
BcaC03g17171 Brassica carinata HOM05D005090 ORTHO05D006142 2.4e-10 69.7 83 49.4
BolC2t11185H Brassica oleracea HOM05D005090 ORTHO05D006142 2.4e-10 69.7 83 49.4
Sabra02G0096900 Salix brachista HOM05D005090 ORTHO05D006142 2.4e-10 69.7 58 60.3
BolC6t37479H Brassica oleracea HOM05D005090 ORTHO05D006142 1.5e-09 67.0 83 47.0
C02p38970 Brassica napus HOM05D005090 ORTHO05D006142 9.9e-09 64.3 82 46.3
BolC2t09908H Brassica oleracea HOM05D005090 ORTHO05D006142 9.9e-09 64.3 82 46.3
Sabra02G0096800 Salix brachista HOM05D005090 ORTHO05D006142 1.4e-07 60.5 48 60.4


User provided reference genes

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