Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI16_g20893_MAGBIO Magnolia biondii HOM05D003733 ORTHO05D004035 3.7e-151 538.5 337 100.0
MBI16_g41329_MAGBIO Magnolia biondii HOM05D003733 ORTHO05D004035 3.5e-53 213.0 192 77.1
TAR381G0096 Trochodendron aralioides HOM05D003733 ORTHO05D004035 1.0e-47 194.9 235 57.0
Nn1g05776 Nelumbo nucifera HOM05D003733 ORTHO05D004035 8.4e-47 191.8 236 55.9
Actinidia11935 Actinidia chinensis HOM05D003733 ORTHO05D004035 1.9e-46 190.7 233 56.7
Dinv26992 Davidia involucrata HOM05D003733 ORTHO05D004035 1.9e-46 190.7 198 54.5
CSS0008611 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 3.2e-46 189.9 231 50.6
Cfa006814 Carpinus fangiana HOM05D003733 ORTHO05D004035 4.2e-46 189.5 232 55.2
Actinidia36390 Actinidia chinensis HOM05D003733 ORTHO05D004035 2.1e-45 187.2 195 54.4
Potri.007G009700 Populus trichocarpa HOM05D003733 ORTHO05D004035 1.3e-44 184.5 169 60.9
TAR625G0952 Trochodendron aralioides HOM05D003733 ORTHO05D004035 2.3e-44 183.7 198 55.6
Haze_03945 Corylus avellana HOM05D003733 ORTHO05D004035 8.7e-44 181.8 232 53.9
Potri.005G148700 Populus trichocarpa HOM05D003733 ORTHO05D004035 4.3e-43 179.5 197 51.3
TAR376G0930 Trochodendron aralioides HOM05D003733 ORTHO05D004035 1.1e-41 174.9 192 57.8
CANSAT01G3253 Cannabis sativa HOM05D003733 ORTHO05D004035 2.4e-41 173.7 196 50.5
Prupe.6G211200 Prunus persica HOM05D003733 ORTHO05D004035 1.0e-39 168.3 164 54.9
TWI53G0148 Tripterygium wilfordii HOM05D003733 ORTHO05D004035 1.3e-39 167.9 169 56.2
vmacro07413 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 1.7e-39 167.5 234 53.8
GSVIVG01003708001 Vitis vinifera HOM05D003733 ORTHO05D004035 2.2e-39 167.2 234 49.6
TPR.G1045 Trifolium pratense HOM05D003733 ORTHO05D008786 3.8e-39 166.4 169 55.0
CiPaw.12G004300 Carya illinoinensis HOM05D003733 ORTHO05D004035 8.5e-39 165.2 238 45.4
Ca_06073_v3 Cicer arietinum L. HOM05D003733 ORTHO05D004035 8.5e-39 165.2 169 53.8
Lj4A174T33 Lonicera japonica HOM05D003733 ORTHO05D004035 1.1e-38 164.9 199 49.7
Manes.12G120000 Manihot esculenta HOM05D003733 ORTHO05D004035 1.9e-38 164.1 167 55.1
QL06p037705 Quercus lobata HOM05D003733 ORTHO05D004035 2.5e-38 163.7 200 48.0
ATR0584G133 Amborella trichopoda HOM05D003733 ORTHO05D004035 4.2e-38 162.9 184 51.1
RcHm_v2.0_Chr2g0109681 Rosa chinensis HOM05D003733 ORTHO05D004035 4.2e-38 162.9 169 55.0
Medtr5g030610 Medicago truncatula HOM05D003733 ORTHO05D004035 5.5e-38 162.5 170 54.1
Medtr5g430710 Medicago truncatula HOM05D003733 ORTHO05D008786 5.5e-38 162.5 170 54.1
Aqoxy4G03244 Aquilegia oxysepala HOM05D003733 ORTHO05D004035 9.4e-38 161.8 234 50.0
Glyma.08G272800 Glycine max HOM05D003733 ORTHO05D004035 1.2e-37 161.4 168 56.0
CiPaw.12G004100 Carya illinoinensis HOM05D003733 ORTHO05D004035 2.1e-37 160.6 240 51.7
Psat2g135720 Pisum sativum HOM05D003733 ORTHO05D004035 1.4e-36 157.9 169 51.5
Rhsim10G0187300 Rhododendron simsii HOM05D006560 ORTHO05D008164 1.4e-36 157.9 249 47.8
Lj4g0014652 Lotus japonicus HOM05D003733 ORTHO05D004035 2.3e-36 157.1 211 53.1
ClCG01G018090 Citrullus lanatus HOM05D003733 ORTHO05D008786 3.9e-36 156.4 197 48.7
CARHR114000 Cardamine hirsuta HOM05D003733 ORTHO05D004035 2.0e-35 154.1 201 49.8
THA.LOC104804189 Tarenaya hassleriana HOM05D003733 ORTHO05D004035 2.0e-35 154.1 169 50.9
Glyma.01G097200 Glycine max HOM05D003733 ORTHO05D004035 2.5e-35 153.7 168 53.0
MD16G1281700 Malus domestica HOM05D003733 ORTHO05D004035 2.5e-35 153.7 163 54.6
arahy.Tifrunner.gnm1.ann1.DCX0GA Arachis hypogaea HOM05D003733 ORTHO05D004035 4.3e-35 152.9 164 52.4
arahy.Tifrunner.gnm1.ann1.KS8TVJ Arachis hypogaea HOM05D003733 ORTHO05D004035 4.3e-35 152.9 164 52.4
DCAR_025843 Daucus carota HOM05D003733 ORTHO05D004035 4.3e-35 152.9 163 52.1
Lalb_Chr16g0381411 Lupinus albus HOM05D003733 ORTHO05D004035 4.3e-35 152.9 192 49.0
Phvul.003G285300 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 4.3e-35 152.9 194 47.9
Eucgr.D00182 Eucalyptus grandis HOM05D003733 ORTHO05D004035 7.4e-35 152.1 170 50.0
Lj3g0005458 Lotus japonicus HOM05D003733 ORTHO05D004035 9.7e-35 151.8 211 53.1
COL.COLO4_11664 Corchorus olitorius HOM05D000513 ORTHO05D008786 3.7e-34 149.8 163 52.1
CsaV3_6G044630 Cucumis sativus L. HOM05D003733 ORTHO05D004035 4.8e-34 149.4 197 47.7
Lj2g0016248 Lotus japonicus HOM05D003733 ORTHO05D004035 4.8e-34 149.4 196 46.9
MD01G1046400 Malus domestica HOM05D003733 ORTHO05D004035 4.8e-34 149.4 165 53.9
Gohir.D03G033400 Gossypium hirsutum HOM05D003733 ORTHO05D004035 8.2e-34 148.7 189 49.7
vmacro20437 Vaccinium macrocarpon HOM05D003733 ORTHO05D004035 1.4e-33 147.9 168 52.4
Aa31LG7G14100 Aethionema arabicum HOM05D003733 ORTHO05D004035 1.8e-33 147.5 204 49.0
AL4G12240 Arabidopsis lyrata HOM05D003733 ORTHO05D004035 1.8e-33 147.5 164 52.4
MELO3C007686.2 Cucumis melo HOM05D003733 ORTHO05D004035 1.8e-33 147.5 197 47.2
PSO761G0336 Papaver somniferum HOM05D003733 ORTHO05D004035 1.8e-33 147.5 212 44.3
Atru.chr3.1125_Atru.chr3.1126 Acer truncatum HOM05D003733 ORTHO05D004035 2.4e-33 147.1 196 46.4
Atru.chr3.1134_Atru.chr3.1135 Acer truncatum HOM05D003733 ORTHO05D004035 2.4e-33 147.1 196 46.4
Gorai.003G035000 Gossypium raimondii HOM05D003733 ORTHO05D004035 2.4e-33 147.1 189 49.2
Duzib264G0286 Durio zibethinus HOM05D003733 ORTHO05D004035 3.1e-33 146.7 197 47.2
VMungo1309G1560 Vigna mungo HOM05D003733 ORTHO05D004035 3.1e-33 146.7 163 47.9
Phvul.002G139100 Phaseolus vulgaris HOM05D003733 ORTHO05D004035 6.9e-33 145.6 162 51.2
HanXRQChr12g0366081 Helianthus annuus HOM05D003733 ORTHO05D004035 1.5e-32 144.4 237 47.3
Gohir.A02G147000 Gossypium hirsutum HOM05D003733 ORTHO05D004035 2.0e-32 144.1 189 47.6
PSO210G1228 Papaver somniferum HOM05D003733 ORTHO05D004035 2.0e-32 144.1 231 42.4
Duzib147G1539 Durio zibethinus HOM05D003733 ORTHO05D004035 3.4e-32 143.3 193 46.1
ATR0706G065 Amborella trichopoda HOM05D003733 ORTHO05D004035 4.5e-32 142.9 223 45.3
Manes.13G105200 Manihot esculenta HOM05D003733 ORTHO05D004035 4.5e-32 142.9 195 45.1
Sp4g01710 Schrenkiella parvula HOM05D003733 ORTHO05D004035 5.9e-32 142.5 159 49.7
Carub.0004s0185 Capsella rubella HOM05D003733 ORTHO05D004035 7.7e-32 142.1 203 48.8
THA.LOC104807653 Tarenaya hassleriana HOM05D003733 ORTHO05D004035 7.7e-32 142.1 234 40.2
Thecc.01G082000 Theobroma cacao HOM05D003733 ORTHO05D004035 7.7e-32 142.1 191 47.1
AT2G22720 Arabidopsis thaliana HOM05D003733 ORTHO05D004035 1.3e-31 141.4 162 51.9
Sabra07G0007400 Salix brachista HOM05D003733 ORTHO05D008786 1.7e-31 141.0 168 51.2
BcaB06g27818 Brassica carinata HOM05D003733 ORTHO05D004035 2.2e-31 140.6 161 47.2
Lalb_Chr09g0325721 Lupinus albus HOM05D003733 ORTHO05D004035 2.2e-31 140.6 164 50.0
VMungo0251G1204 Vigna mungo HOM05D003733 ORTHO05D004035 3.8e-31 139.8 189 44.4
Sed0009716 Sechium edule HOM05D003733 ORTHO05D004035 6.5e-31 139.0 186 45.2
BolC4t26775H Brassica oleracea HOM05D003733 ORTHO05D004035 8.5e-31 138.7 241 42.7
HanXRQChr17g0561681 Helianthus annuus HOM05D003733 ORTHO05D004035 1.1e-30 138.3 233 45.5
FvH4_1g18820 Fragaria vesca HOM05D003733 ORTHO05D004035 1.4e-30 137.9 198 43.9
PGSC0003DMG400030618 Solanum tuberosum HOM05D003733 ORTHO05D004035 1.4e-30 137.9 200 53.0
PGR102G0988 Punica granatum HOM05D003733 ORTHO05D004035 2.5e-30 137.1 164 50.6
C04p52030 Brassica napus HOM05D002219 ORTHO05D002713 3.2e-30 136.7 239 42.3
Lsat_1_v5_gn_8_34760 Lactuca sativa HOM05D003733 ORTHO05D004035 3.2e-30 136.7 206 47.1
Sed0014908 Sechium edule HOM05D003733 ORTHO05D004035 3.2e-30 136.7 198 43.4
VMungo1215G3108 Vigna mungo HOM05D003733 ORTHO05D004035 3.2e-30 136.7 164 52.4
FAN19G3013 Fragaria x ananassa HOM05D003733 ORTHO05D004035 7.2e-30 135.6 172 47.7
PSO832G4530 Papaver somniferum HOM05D003733 ORTHO05D004035 7.2e-30 135.6 200 45.5
Ciclev10025536m.g Citrus clementina HOM05D003733 ORTHO05D004035 9.4e-30 135.2 145 54.5
Nitab4.5_0000396g0250 Nicotiana tabacum HOM05D003733 ORTHO05D004035 9.4e-30 135.2 189 46.6
BraA04t17347Z Brassica rapa HOM05D003733 ORTHO05D004035 2.7e-29 133.7 162 48.1
A04p17190 Brassica napus HOM05D002219 ORTHO05D002713 3.6e-29 133.3 163 47.9
SalBow7G4044 Salvia bowleyana HOM05D003733 ORTHO05D004035 6.1e-29 132.5 298 36.9
Sc03g0000640 Simmondsia chinensis HOM05D003733 ORTHO05D004035 6.1e-29 132.5 202 45.5
BraA09t41127Z Brassica rapa HOM05D003733 ORTHO05D004035 7.9e-29 132.1 189 41.8
Thhalv10000080m.g Eutrema salsugineum HOM05D003733 ORTHO05D004035 7.9e-29 132.1 159 49.1
MSTRG.3501 Avicennia marina HOM05D003733 ORTHO05D004035 1.4e-28 131.3 199 47.2
ECA233G0477 Erigeron canadensis HOM05D003733 ORTHO05D004035 1.4e-28 131.3 240 45.0
Oeu054739.1 Olea europaea HOM05D003733 ORTHO05D004035 2.3e-28 130.6 176 44.9
Solyc02g091730.3 Solanum lycopersicum HOM05D003733 ORTHO05D004035 2.3e-28 130.6 140 52.9
CAN.G1061.16 Capsicum annuum HOM05D003733 ORTHO05D004035 3.9e-28 129.8 172 47.1
FAN23G1272 Fragaria x ananassa HOM05D003733 ORTHO05D004035 3.9e-28 129.8 172 47.7
PSO782G1301 Papaver somniferum HOM05D003733 ORTHO05D004035 5.1e-28 129.4 171 49.1
arahy.Tifrunner.gnm1.ann1.EGH0HL Arachis hypogaea HOM05D003733 ORTHO05D004035 8.8e-28 128.6 207 43.5
C08p40430 Brassica napus HOM05D003733 ORTHO05D004035 2.6e-27 127.1 168 44.0
BolC8t51612H Brassica oleracea HOM05D003733 ORTHO05D004035 2.6e-27 127.1 168 44.0
Migut.L00442 Erythranthe guttata HOM05D003733 ORTHO05D004035 2.6e-27 127.1 197 42.1
Nitab4.5_0014307g0010 Nicotiana tabacum HOM05D003733 ORTHO05D004035 2.6e-27 127.1 167 46.1
arahy.Tifrunner.gnm1.ann1.24SHUP Arachis hypogaea HOM05D003733 ORTHO05D004035 3.3e-27 126.7 208 43.3
Cc07_g07720 Coffea canephora HOM05D003733 ORTHO05D004035 4.4e-27 126.3 172 47.1
Sopen02g036340 Solanum pennellii HOM05D003733 ORTHO05D004035 5.7e-27 125.9 173 53.2
Nitab4.5_0000465g0130 Nicotiana tabacum HOM05D003733 ORTHO05D004035 7.4e-27 125.6 164 47.0
A09p57340 Brassica napus HOM05D003733 ORTHO05D004035 9.7e-27 125.2 196 39.3
Sc16g0000790 Simmondsia chinensis HOM05D003733 ORTHO05D004035 2.8e-26 123.6 195 46.7
CDE10G0649 Ceratophyllum demersum HOM05D003733 ORTHO05D004035 6.3e-26 122.5 196 41.8
Peaxi162Scf00118g00109 Petunia axillaris HOM05D003733 ORTHO05D004035 1.4e-25 121.3 153 47.1
SHI12093 Sapria himalayana HOM05D003733 ORTHO05D004035 1.4e-25 121.3 152 48.0
CDE10G0903 Ceratophyllum demersum HOM05D003733 ORTHO05D004035 4.1e-25 119.8 243 39.1
Os11g0296800 Oryza sativa ssp. japonica HOM05D003733 ORTHO05D004035 9.1e-25 118.6 165 40.0
HPP92_024603 Vanilla planifolia HOM05D003733 ORTHO05D004035 9.1e-25 118.6 207 40.1
CAN.G11.21 Capsicum annuum HOM05D003733 ORTHO05D004035 5.0e-23 112.8 165 44.2
CAN.G630.65 Capsicum annuum HOM05D003733 ORTHO05D004035 1.1e-22 111.7 134 54.5
Sopen03g007620 Solanum pennellii HOM05D003733 ORTHO05D004035 1.1e-22 111.7 158 44.3
Zm00001eb429410 Zea mays HOM05D003733 ORTHO05D004035 1.1e-22 111.7 199 37.7
Solyc03g043760.4 Solanum lycopersicum HOM05D003733 ORTHO05D004035 1.9e-22 110.9 166 42.8
PGSC0003DMG400016686 Solanum tuberosum HOM05D003733 ORTHO05D004035 1.9e-22 110.9 202 37.1
Oeu054741.2 Olea europaea HOM05D003733 ORTHO05D004035 9.4e-22 108.6 166 43.4
Hund23622 Selenicereus undatus HOM05D003733 ORTHO05D004035 1.2e-21 108.2 200 38.0
unitig_0.g2606 Utricularia gibba HOM05D003733 ORTHO05D004035 1.2e-21 108.2 167 44.3
SGA_v2.0_scaffold13G06400 Striga asiatica HOM05D003733 ORTHO05D004035 3.6e-21 106.7 188 38.3
MD02G1269400 Malus domestica HOM05D003733 ORTHO05D004035 1.0e-20 105.1 152 43.4
CARHR246250 Cardamine hirsuta HOM05D003733 ORTHO05D004035 4.0e-20 103.2 179 39.7
CSS0006986 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 5.2e-20 102.8 111 53.2
EL10As13g24049 Beta vulgaris HOM05D003733 ORTHO05D004035 6.7e-20 102.4 194 37.6
CSS0020555 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 7.5e-19 99.0 108 52.8
Prupe.1G068500 Prunus persica HOM05D003733 ORTHO05D004035 7.5e-19 99.0 167 41.3
SEGI_29083 Sequoiadendron giganteum HOM05D003733 ORTHO05D004035 2.2e-18 97.4 192 37.0
SEGI_33741 Sequoiadendron giganteum HOM05D003733 ORTHO05D004035 4.8e-18 96.3 186 39.2
Cpa.g.sc129.28 Carica papaya HOM05D003733 ORTHO05D004035 1.8e-17 94.4 124 62.9
C01p01330 Brassica napus HOM05D003733 ORTHO05D004035 3.1e-17 93.6 165 39.4
Aqoxy6G00872 Aquilegia oxysepala HOM05D003733 ORTHO05D004035 1.2e-16 91.7 193 37.8
SalBow5G1957 Salvia bowleyana HOM05D003733 ORTHO05D004035 2.7e-16 90.5 246 36.6
AT4G37860 Arabidopsis thaliana HOM05D003733 ORTHO05D004035 1.3e-15 88.2 194 37.6
A01p01170 Brassica napus HOM05D003733 ORTHO05D004035 1.3e-15 88.2 171 36.8
BolC1t00129H Brassica oleracea HOM05D003733 ORTHO05D004035 1.3e-15 88.2 173 37.0
Nitab4.5_0000093g0190 Nicotiana tabacum HOM05D003733 ORTHO05D004035 3.8e-15 86.7 95 51.6
Prupe.2G308100 Prunus persica HOM05D003733 ORTHO05D004035 1.5e-14 84.7 171 36.8
AUR62003259 Chenopodium quinoa HOM05D003733 ORTHO05D004035 1.9e-14 84.3 157 35.7
AL7G12820 Arabidopsis lyrata HOM05D003733 ORTHO05D004035 3.2e-14 83.6 169 36.7
BraA01t00115Z Brassica rapa HOM05D003733 ORTHO05D004035 4.2e-14 83.2 220 31.4
Manes.06G161600 Manihot esculenta HOM05D003733 ORTHO05D004035 1.2e-13 81.6 103 46.6
MD15G1405500 Malus domestica HOM05D005427 ORTHO05D006461 4.7e-13 79.7 120 47.5
SGA_v2.0_scaffold174G39242 Striga asiatica HOM05D003733 ORTHO05D004035 1.0e-12 78.6 114 45.6
AUR62027209 Chenopodium quinoa HOM05D003733 ORTHO05D004035 1.4e-12 78.2 152 33.6
Dinv36994 Davidia involucrata HOM05D003733 ORTHO05D004035 2.3e-12 77.4 149 36.9
BcaNung00967 Brassica carinata HOM05D003733 ORTHO05D004035 3.0e-12 77.0 187 33.7
Sabra16G0155500 Salix brachista HOM05D003733 ORTHO05D004035 4.0e-12 76.6 139 42.4
Os02g0664400 Oryza sativa ssp. japonica HOM05D003733 ORTHO05D004035 5.2e-12 76.3 188 31.9
Potri.001G257300 Populus trichocarpa HOM05D003733 ORTHO05D004035 8.8e-12 75.5 144 41.0
Zm00001eb186830 Zea mays HOM05D003733 ORTHO05D004035 1.2e-11 75.1 153 37.9
Sabra16G0157300 Salix brachista HOM05D003733 ORTHO05D004035 7.5e-11 72.4 139 41.0
CANSAT11G2490 Cannabis sativa HOM05D003733 ORTHO05D004035 9.8e-11 72.0 156 37.2
Sp7g35500 Schrenkiella parvula HOM05D003733 ORTHO05D004035 1.7e-10 71.2 113 38.9
Mapoly0034s0125 Marchantia polymorpha HOM05D025130 ORTHO05D030134 2.2e-10 70.9 110 38.2
TAR628G0576 Trochodendron aralioides HOM05D003733 ORTHO05D004035 3.1e-09 67.0 45 73.3
SGA_v2.0_scaffold55G19776 Striga asiatica HOM05D003733 ORTHO05D004035 2.7e-08 63.9 151 34.4
AagrBONN_evm.TU.Sc2ySwM_117.778 Anthoceros agrestis HOM05D025130 ORTHO05D004035 2.9e-07 60.5 139 36.0
CSS0014575 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 3.8e-07 60.1 80 48.8
Lalb_Chr05g0216131 Lupinus albus HOM05D001142 ORTHO05D003453 3.8e-07 60.1 72 45.8
Oeu012608.1 Olea europaea HOM05D003733 ORTHO05D004035 1.5e-06 58.2 77 44.2
CSS0018014 Camellia sinensis var. sinensis HOM05D003733 ORTHO05D004035 1.9e-06 57.8 80 47.5
unitig_88.g27718 Utricularia gibba HOM05D003733 ORTHO05D004035 4.2e-06 56.6 130 32.3
Pp3c20_3960 Physcomitrium patens HOM05D025130 ORTHO05D030134 5.5e-06 56.2 196 30.6
Pp3c20_4020 Physcomitrium patens HOM05D025130 ORTHO05D030134 5.5e-06 56.2 196 30.6
CARHR207720 Cardamine hirsuta HOM05D003733 ORTHO05D004035 7.2e-06 55.8 164 30.5


User provided reference genes

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