Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g44151_MAGBIO Magnolia biondii HOM05D001597 ORTHO05D001512 3.0e-34 147.9 73 100.0
MBI15_g28291_MAGBIO Magnolia biondii HOM05D001597 ORTHO05D001512 7.0e-23 110.2 73 80.8
MBI15_g15736_MAGBIO Magnolia biondii HOM05D000479 ORTHO05D001285 3.1e-10 68.2 72 52.8
MBI15_g15738_MAGBIO Magnolia biondii HOM05D000479 ORTHO05D019803 9.8e-09 63.2 34 88.2
MBI01_g02254_MAGBIO Magnolia biondii HOM05D000095 ORTHO05D000393 6.4e-08 60.5 32 87.5
Dinv37562 Davidia involucrata HOM05D001597 ORTHO05D001512 5.4e-07 57.4 34 85.3
Atru.chr9.2068 Acer truncatum HOM05D001597 ORTHO05D001512 7.0e-07 57.0 34 85.3
Duzib068G0506 Durio zibethinus HOM05D001597 ORTHO05D001512 7.0e-07 57.0 34 85.3
Duzib205G0027 Durio zibethinus HOM05D001597 ORTHO05D001512 7.0e-07 57.0 34 85.3
MBI06_g04294_MAGBIO Magnolia biondii HOM05D001597 ORTHO05D001512 7.0e-07 57.0 34 85.3
ECA236G2564 Erigeron canadensis HOM05D001597 ORTHO05D001512 9.2e-07 56.6 34 82.4
Gohir.D12G113300 Gossypium hirsutum HOM05D001597 ORTHO05D001512 9.2e-07 56.6 34 82.4
Lsat_1_v5_gn_7_1480 Lactuca sativa HOM05D001597 ORTHO05D001512 9.2e-07 56.6 34 82.4
Lj9C593G12 Lonicera japonica HOM05D001597 ORTHO05D001512 9.2e-07 56.6 34 82.4
CSS0008646 Camellia sinensis var. sinensis HOM05D001597 ORTHO05D001512 1.2e-06 56.2 32 87.5
CSS0008739 Camellia sinensis var. sinensis HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
CSS0034741 Camellia sinensis var. sinensis HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
Haze_08701 Corylus avellana HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
Gohir.A08G033500 Gossypium hirsutum HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
Gohir.A12G110300 Gossypium hirsutum HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
Gohir.D08G044200 Gossypium hirsutum HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
Gohir.D11G098600 Gossypium hirsutum HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
Gorai.004G043000 Gossypium raimondii HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
Gorai.007G104800 Gossypium raimondii HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
Gorai.008G122900 Gossypium raimondii HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
Manes.02G013900 Manihot esculenta HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
PGR031G2023 Punica granatum HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
Rhsim07G0008200 Rhododendron simsii HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
vmacro13207 Vaccinium macrocarpon HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
GSVIVG01019465001 Vitis vinifera HOM05D001597 ORTHO05D001512 1.2e-06 56.2 34 82.4
CDE02G3222 Ceratophyllum demersum HOM05D001597 ORTHO05D001512 1.6e-06 55.8 34 82.4
CDE08G1068 Ceratophyllum demersum HOM05D001597 ORTHO05D001512 1.6e-06 55.8 34 82.4
Duzib133G0916 Durio zibethinus HOM05D001597 ORTHO05D001512 1.6e-06 55.8 34 79.4
FAN08G3603 Fragaria x ananassa HOM05D001597 ORTHO05D001512 1.6e-06 55.8 33 84.8
MBI02_g11379_MAGBIO Magnolia biondii HOM05D004946 ORTHO05D006101 1.6e-06 55.8 46 69.6
Nn7g37361 Nelumbo nucifera HOM05D001597 ORTHO05D001512 1.6e-06 55.8 34 82.4
PSO135G0595 Papaver somniferum HOM05D001597 ORTHO05D001512 1.6e-06 55.8 34 82.4
PSO384G0773 Papaver somniferum HOM05D001597 ORTHO05D001512 1.6e-06 55.8 34 82.4
Dinv32543 Davidia involucrata HOM05D001597 ORTHO05D001512 2.0e-06 55.5 34 79.4
Thecc.03G290800 Theobroma cacao HOM05D001597 ORTHO05D001512 2.0e-06 55.5 34 82.4
Actinidia10094 Actinidia chinensis HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
CiPaw.12G086500 Carya illinoinensis HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
Ciclev10019570m.g Citrus clementina HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
ECA234G1805 Erigeron canadensis HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
HanXRQChr06g0170511 Helianthus annuus HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
MD01G1074300 Malus domestica HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
MD07G1143200 Malus domestica HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
Manes.05G027100 Manihot esculenta HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
Potri.002G166700 Populus trichocarpa HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
Potri.014G093700 Populus trichocarpa HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
Prupe.2G182300 Prunus persica HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
QL02p031955 Quercus lobata HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 82.4
QL04p059786 Quercus lobata HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
Sabra02G0144900 Salix brachista HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
Sabra14G0068400 Salix brachista HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
SGA_v2.0_scaffold4G02264 Striga asiatica HOM05D001597 ORTHO05D001512 2.7e-06 55.1 33 78.8
TWI14G1198 Tripterygium wilfordii HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 79.4
TAR636G0707 Trochodendron aralioides HOM05D001597 ORTHO05D001512 2.7e-06 55.1 34 82.4
Atru.chr5.607 Acer truncatum HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 76.5
COL.COLO4_21745 Corchorus olitorius HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 79.4
Duzib138G1084 Durio zibethinus HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 79.4
FvH4_7g15752 Fragaria vesca HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 76.5
FAN03G3199 Fragaria x ananassa HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 76.5
FAN06G4080 Fragaria x ananassa HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 76.5
FAN06G5084 Fragaria x ananassa HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 76.5
FAN10G2054 Fragaria x ananassa HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 76.5
Gohir.A12G231800 Gossypium hirsutum HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 82.4
Gohir.D12G235425 Gossypium hirsutum HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 82.4
Gorai.008G251700 Gossypium raimondii HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 82.4
RcHm_v2.0_Chr1g0358521 Rosa chinensis HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 76.5
RcHm_v2.0_Chr7g0195841 Rosa chinensis HOM05D001597 ORTHO05D001512 3.5e-06 54.7 32 84.4
GSVIVG01027032001 Vitis vinifera HOM05D001597 ORTHO05D001512 3.5e-06 54.7 34 76.5
ClCG05G001010 Citrullus lanatus HOM05D001597 ORTHO05D001512 4.6e-06 54.3 34 76.5
MELO3C006051.2 Cucumis melo HOM05D001597 ORTHO05D001512 4.6e-06 54.3 34 76.5
CsaV3_3G008330 Cucumis sativus L. HOM05D001597 ORTHO05D001512 4.6e-06 54.3 34 76.5
FvH4_5g03751 Fragaria vesca HOM05D001597 ORTHO05D001512 4.6e-06 54.3 32 84.4
FAN13G1206 Fragaria x ananassa HOM05D001597 ORTHO05D001512 4.6e-06 54.3 32 84.4
FAN13G1401 Fragaria x ananassa HOM05D001597 ORTHO05D001512 4.6e-06 54.3 32 84.4
FAN18G3458 Fragaria x ananassa HOM05D001597 ORTHO05D001512 4.6e-06 54.3 32 84.4
Gohir.A11G093600 Gossypium hirsutum HOM05D001597 ORTHO05D001512 4.6e-06 54.3 34 79.4
Actinidia28490 Actinidia chinensis HOM05D001597 ORTHO05D001512 6.0e-06 53.9 34 79.4
Cpa.g.sc184.4 Carica papaya HOM05D001597 ORTHO05D001512 6.0e-06 53.9 34 79.4
Cc08_g15590 Coffea canephora HOM05D001597 ORTHO05D001512 6.0e-06 53.9 34 79.4
COL.COLO4_06348 Corchorus olitorius HOM05D001597 ORTHO05D001512 6.0e-06 53.9 34 76.5
HanXRQChr04g0120601 Helianthus annuus HOM05D001597 ORTHO05D001512 6.0e-06 53.9 34 73.5
Manes.01G250200 Manihot esculenta HOM05D001597 ORTHO05D001512 6.0e-06 53.9 35 71.4
Hund16688 Selenicereus undatus HOM05D001597 ORTHO05D001512 6.0e-06 53.9 34 76.5
TPR.G4735 Trifolium pratense HOM05D001597 ORTHO05D001512 6.0e-06 53.9 34 76.5
EL10Ac1g00326 Beta vulgaris HOM05D001597 ORTHO05D001512 7.8e-06 53.5 34 73.5
EL10Ac5g12863 Beta vulgaris HOM05D001597 ORTHO05D001512 7.8e-06 53.5 34 79.4
AUR62010791 Chenopodium quinoa HOM05D001597 ORTHO05D001512 7.8e-06 53.5 34 79.4
Nn1g01770 Nelumbo nucifera HOM05D001597 ORTHO05D001512 7.8e-06 53.5 34 76.5
Prupe.5G112100 Prunus persica HOM05D001597 ORTHO05D001512 7.8e-06 53.5 34 76.5
Hund27229 Selenicereus undatus HOM05D001597 ORTHO05D001512 7.8e-06 53.5 34 73.5
TAR629G3319 Trochodendron aralioides HOM05D001597 ORTHO05D001512 7.8e-06 53.5 34 79.4


User provided reference genes

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