Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g35614_MAGBIO Magnolia biondii HOM05D003842 ORTHO05D004436 1.2e-50 203.0 106 100.0
MBI15_g45591_MAGBIO Magnolia biondii HOM05D003842 ORTHO05D004436 2.3e-35 152.1 81 95.1
MBI17_g12240_MAGBIO Magnolia biondii HOM05D003842 ORTHO05D004436 6.2e-28 127.5 81 84.0
MBI03_g13096_MAGBIO Magnolia biondii HOM05D003842 ORTHO05D004436 1.0e-27 126.7 81 82.7
MBI16_g06660_MAGBIO Magnolia biondii HOM05D003842 ORTHO05D004436 6.8e-27 124.0 81 82.7
MBI05_g20002_MAGBIO Magnolia biondii HOM05D000695 ORTHO05D004436 1.1e-24 116.7 85 72.9
RcHm_v2.0_Chr3g0471001 Rosa chinensis HOM05D003842 ORTHO05D004436 2.4e-24 115.5 86 68.6
TAR633G0529 Trochodendron aralioides HOM05D003842 ORTHO05D004436 2.4e-24 115.5 86 68.6
Dinv35821 Davidia involucrata HOM05D003842 ORTHO05D004436 4.1e-24 114.8 86 66.3
FAN09G2316 Fragaria x ananassa HOM05D003842 ORTHO05D004436 4.1e-24 114.8 86 68.6
FAN02G1267 Fragaria x ananassa HOM05D003842 ORTHO05D004436 5.4e-24 114.4 86 67.4
Manes.08G013802 Manihot esculenta HOM05D003842 ORTHO05D004436 5.4e-24 114.4 97 59.8
CSS0021824 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 7.0e-24 114.0 86 68.6
CSS0023266 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 7.0e-24 114.0 86 68.6
FAN05G0072 Fragaria x ananassa HOM05D003842 ORTHO05D004436 9.2e-24 113.6 86 67.4
FAN05G4099 Fragaria x ananassa HOM05D003842 ORTHO05D004436 9.2e-24 113.6 86 67.4
MD12G1104900 Malus domestica HOM05D003842 ORTHO05D004436 9.2e-24 113.6 86 65.1
PGR142G1271 Punica granatum HOM05D003842 ORTHO05D004436 1.2e-23 113.2 85 68.2
FvH4_6g17010 Fragaria vesca HOM05D003842 ORTHO05D004436 2.0e-23 112.5 86 67.4
Cfa016461 Carpinus fangiana HOM05D003842 ORTHO05D004436 2.7e-23 112.1 97 57.7
Ciclev10023867m.g Citrus clementina HOM05D003842 ORTHO05D004436 2.7e-23 112.1 97 59.8
Prupe.7G124700 Prunus persica HOM05D003842 ORTHO05D004436 4.6e-23 111.3 86 64.0
Lj3C992G6 Lonicera japonica HOM05D003842 ORTHO05D004436 6.0e-23 110.9 85 64.7
Nn6g35197 Nelumbo nucifera HOM05D003842 ORTHO05D004436 6.0e-23 110.9 97 61.9
TWI74G0820 Tripterygium wilfordii HOM05D003842 ORTHO05D004436 6.0e-23 110.9 86 62.8
Haze_19462 Corylus avellana HOM05D003842 ORTHO05D004436 7.8e-23 110.5 97 57.7
MELO3C024492.2 Cucumis melo HOM05D003842 ORTHO05D004436 7.8e-23 110.5 86 62.8
ECA233G4297 Erigeron canadensis HOM05D003842 ORTHO05D004436 7.8e-23 110.5 88 63.6
QL07p041738 Quercus lobata HOM05D003842 ORTHO05D004436 1.3e-22 109.8 97 57.7
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 1.7e-22 109.4 88 61.4
CANSAT80G2389 Cannabis sativa HOM05D003842 ORTHO05D004436 2.3e-22 109.0 86 65.1
CAN.G1038.13 Capsicum annuum HOM05D003842 ORTHO05D004436 2.3e-22 109.0 86 64.0
AUR62036532 Chenopodium quinoa HOM05D003842 ORTHO05D004436 2.3e-22 109.0 97 58.8
Ah.08g211380 Amaranthus hybridus HOM05D003842 ORTHO05D004436 3.9e-22 108.2 97 58.8
ClCG04G009540 Citrullus lanatus HOM05D003842 ORTHO05D004436 3.9e-22 108.2 86 61.6
CsaV3_6G040160 Cucumis sativus L. HOM05D003842 ORTHO05D004436 3.9e-22 108.2 86 61.6
PSO063G4107 Papaver somniferum HOM05D003842 ORTHO05D004436 3.9e-22 108.2 86 62.8
Peaxi162Scf00435g01013 Petunia axillaris HOM05D003842 ORTHO05D004436 3.9e-22 108.2 86 64.0
Sabra06G0095000 Salix brachista HOM05D003842 ORTHO05D004436 3.9e-22 108.2 86 65.1
Thecc.05G072900 Theobroma cacao HOM05D003842 ORTHO05D004436 3.9e-22 108.2 97 58.8
Sed0026042 Sechium edule HOM05D003842 ORTHO05D004436 5.0e-22 107.8 86 61.6
Solyc09g008490.4 Solanum lycopersicum HOM05D003842 ORTHO05D004436 5.0e-22 107.8 86 64.0
Sopen09g003320 Solanum pennellii HOM05D003842 ORTHO05D004436 5.0e-22 107.8 86 64.0
Nitab4.5_0003314g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 6.6e-22 107.5 86 62.8
Sc20g0005740 Simmondsia chinensis HOM05D003842 ORTHO05D004436 6.6e-22 107.5 90 60.0
PSO339G3623 Papaver somniferum HOM05D003842 ORTHO05D004436 8.6e-22 107.1 86 62.8
TPR.G8693 Trifolium pratense HOM05D003842 ORTHO05D004436 1.1e-21 106.7 86 60.5
Ca_08873_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.5e-21 106.3 86 60.5
Ca_08928_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.5e-21 106.3 86 60.5
Cpa.g.sc5.147 Carica papaya HOM05D003842 ORTHO05D004436 1.9e-21 105.9 86 61.6
Medtr7g102430 Medicago truncatula HOM05D003842 ORTHO05D004436 1.9e-21 105.9 86 59.3
Potri.006G120800 Populus trichocarpa HOM05D003842 ORTHO05D004436 1.9e-21 105.9 86 62.8
HanXRQChr13g0400661 Helianthus annuus HOM05D003842 ORTHO05D004436 2.5e-21 105.5 88 62.5
Lj1g0002569 Lotus japonicus HOM05D003842 ORTHO05D004436 2.5e-21 105.5 90 57.8
Nitab4.5_0002535g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 2.5e-21 105.5 85 62.4
Glyma.19G186900 Glycine max HOM05D003842 ORTHO05D004436 3.3e-21 105.1 86 59.3
Cc06_g04620 Coffea canephora HOM05D003842 ORTHO05D004436 5.6e-21 104.4 86 62.8
Migut.L01724 Erythranthe guttata HOM05D003842 ORTHO05D004436 5.6e-21 104.4 86 60.5
Phvul.001G181800 Phaseolus vulgaris HOM05D003842 ORTHO05D004436 5.6e-21 104.4 86 58.1
CiPaw.09G003300 Carya illinoinensis HOM05D003842 ORTHO05D004436 7.3e-21 104.0 97 56.7
Duzib106G1778 Durio zibethinus HOM05D003842 ORTHO05D004436 7.3e-21 104.0 90 60.0
Duzib093G0118 Durio zibethinus HOM05D003842 ORTHO05D004436 9.5e-21 103.6 99 55.6
GSVIVG01033696001 Vitis vinifera HOM05D003842 ORTHO05D004436 9.5e-21 103.6 86 61.6
Lalb_Chr20g0112381 Lupinus albus HOM05D003842 ORTHO05D004436 1.2e-20 103.2 86 58.1
Oeu045240.1 Olea europaea HOM05D003842 ORTHO05D004436 1.2e-20 103.2 86 61.6
Atru.chr8.1720 Acer truncatum HOM05D003842 ORTHO05D004436 2.1e-20 102.4 90 58.9
arahy.Tifrunner.gnm1.ann1.CVPH5H Arachis hypogaea HOM05D003842 ORTHO05D004436 2.8e-20 102.1 86 58.1
Eucgr.K02431 Eucalyptus grandis HOM05D003842 ORTHO05D004436 2.8e-20 102.1 86 61.6
Thhalv10016131m.g Eutrema salsugineum HOM05D003842 ORTHO05D004436 3.6e-20 101.7 86 57.0
Psat3g040240 Pisum sativum HOM05D003842 ORTHO05D004436 3.6e-20 101.7 86 58.1
BcaC02g07579 Brassica carinata HOM05D003842 ORTHO05D004436 4.7e-20 101.3 86 57.0
MSTRG.26674 Avicennia marina HOM05D003842 ORTHO05D004436 1.1e-19 100.1 86 58.1
SGA_v2.0_scaffold224G42922 Striga asiatica HOM05D003842 ORTHO05D004436 1.1e-19 100.1 86 60.5
ATR0043G024 Amborella trichopoda HOM05D003842 ORTHO05D004436 1.4e-19 99.8 90 55.6
A04p28120 Brassica napus HOM05D003842 ORTHO05D004436 1.8e-19 99.4 86 55.8
C04p65510 Brassica napus HOM05D003842 ORTHO05D004436 1.8e-19 99.4 86 55.8
BraA04t18297Z Brassica rapa HOM05D003842 ORTHO05D004436 1.8e-19 99.4 86 55.8
Sp4g19070 Schrenkiella parvula HOM05D003842 ORTHO05D004436 1.8e-19 99.4 86 54.7
AL4G33000 Arabidopsis lyrata HOM05D003842 ORTHO05D004436 2.3e-19 99.0 86 55.8
BolC4t28040H Brassica oleracea HOM05D003842 ORTHO05D004436 2.3e-19 99.0 86 55.8
Gohir.A09G144400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 2.3e-19 99.0 99 52.5
Gohir.D09G140200 Gossypium hirsutum HOM05D003842 ORTHO05D004436 2.3e-19 99.0 99 52.5
Gorai.006G160800 Gossypium raimondii HOM05D003842 ORTHO05D004436 2.3e-19 99.0 99 52.5
Carub.0004s1865 Capsella rubella HOM05D003842 ORTHO05D004436 5.2e-19 97.8 86 54.7
MBI19_g13910_MAGBIO Magnolia biondii HOM05D003842 ORTHO05D004436 5.2e-19 97.8 53 86.8
Aqoxy1G01066 Aquilegia oxysepala HOM05D003842 ORTHO05D004436 6.8e-19 97.4 86 60.5
AT2G36810 Arabidopsis thaliana HOM05D003842 ORTHO05D004436 6.8e-19 97.4 86 54.7
DCAR_020802 Daucus carota HOM05D003842 ORTHO05D004436 8.9e-19 97.1 96 54.2
CARHR131190 Cardamine hirsuta HOM05D003842 ORTHO05D004436 1.2e-18 96.7 86 55.8
THA.LOC104818591 Tarenaya hassleriana HOM05D003842 ORTHO05D004436 1.5e-18 96.3 86 54.7
AUR62042272 Chenopodium quinoa HOM05D003842 ORTHO05D004436 2.0e-18 95.9 133 44.4
Gohir.A11G323300 Gossypium hirsutum HOM05D003842 ORTHO05D004436 2.0e-18 95.9 88 55.7
Gohir.D11G342400 Gossypium hirsutum HOM05D003842 ORTHO05D004436 2.0e-18 95.9 88 55.7
Gorai.007G372400 Gossypium raimondii HOM05D003842 ORTHO05D004436 2.0e-18 95.9 88 55.7
Aa31LG5G22020 Aethionema arabicum HOM05D003842 ORTHO05D004436 2.6e-18 95.5 86 53.5
Zm00001eb003810 Zea mays HOM05D003842 ORTHO05D004436 3.4e-18 95.1 86 57.0
MBI05_g14868_MAGBIO Magnolia biondii HOM05D003842 ORTHO05D004436 1.3e-17 93.2 53 83.0
MBI18_g37353_MAGBIO Magnolia biondii HOM05D003842 ORTHO05D004436 2.4e-16 89.0 57 84.2
COL.COLO4_26898 Corchorus olitorius HOM05D003842 ORTHO05D004436 4.1e-16 88.2 88 54.5
EL10Ac7g16718 Beta vulgaris HOM05D003842 ORTHO05D004436 1.7e-14 82.8 97 47.4
Rhsim03G0088500 Rhododendron simsii HOM05D003842 ORTHO05D004436 1.7e-14 82.8 84 52.4
arahy.Tifrunner.gnm1.ann1.BQYP5G Arachis hypogaea HOM05D003842 ORTHO05D004436 4.3e-13 78.2 86 47.7
Mapoly0008s0039 Marchantia polymorpha HOM05D003842 ORTHO05D004436 2.4e-08 62.4 80 38.8
Pp3c2_21970 Physcomitrium patens HOM05D003842 ORTHO05D004436 2.1e-07 59.3 81 40.7
Pp3c22_4780 Physcomitrium patens HOM05D003842 ORTHO05D004436 3.9e-06 55.1 87 36.8


User provided reference genes

Program Settings