Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.6e-247 859.0 432 100.0
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.5e-184 649.0 415 79.8
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 9.1e-179 630.6 416 78.1
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 1.4e-174 616.7 411 77.9
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 8.6e-169 597.4 428 72.9
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 8.6e-169 597.4 373 81.8
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 9.2e-163 577.4 402 73.6
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 2.0e-162 576.2 373 78.8
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 3.5e-162 575.5 412 73.5
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.1e-160 570.5 400 73.2
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 2.5e-160 569.3 386 75.6
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 5.6e-160 568.2 373 77.7
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 6.1e-159 564.7 407 72.2
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 2.3e-158 562.8 370 78.9
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 8.9e-158 560.8 404 72.3
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 1.2e-157 560.5 373 76.4
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.5e-157 560.1 396 73.0
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 7.5e-157 557.8 377 75.9
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.7e-156 556.6 401 72.3
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 2.2e-156 556.2 375 75.7
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 6.4e-156 554.7 411 70.3
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 6.4e-156 554.7 393 71.8
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 1.1e-155 553.9 402 72.6
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 1.9e-155 553.1 416 70.2
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 4.1e-155 552.0 411 68.9
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 5.4e-155 551.6 416 69.5
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 7.0e-155 551.2 401 71.3
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 2.7e-154 549.3 371 76.3
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 7.8e-154 547.7 362 76.8
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 2.3e-153 546.2 402 70.6
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 3.0e-153 545.8 402 70.6
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 3.9e-153 545.4 391 71.6
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 5.0e-153 545.0 400 70.0
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 6.6e-153 544.7 372 74.5
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 6.6e-153 544.7 371 74.7
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.5e-152 543.5 371 74.1
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.5e-152 543.5 401 69.8
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 1.5e-152 543.5 373 75.3
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.9e-152 543.1 399 70.4
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 5.6e-152 541.6 400 70.2
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 5.6e-152 541.6 408 69.4
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 7.3e-152 541.2 372 73.9
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 9.5e-152 540.8 372 73.9
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.2e-151 540.4 403 70.2
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 1.6e-151 540.0 399 69.2
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.1e-151 539.7 400 71.5
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 2.1e-151 539.7 413 67.8
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 6.2e-151 538.1 442 65.6
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 8.0e-151 537.7 418 67.9
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 1.1e-150 537.3 372 73.9
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 1.8e-150 536.6 373 73.5
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 2.3e-150 536.2 371 74.1
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 2.3e-150 536.2 408 68.9
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 6.8e-150 534.6 437 64.3
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 1.5e-149 533.5 399 69.2
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 4.4e-149 531.9 373 72.9
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.3e-148 530.4 371 73.3
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.7e-148 530.0 397 70.0
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 3.7e-148 528.9 443 63.2
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 4.9e-148 528.5 402 67.9
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 8.3e-148 527.7 399 68.7
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 1.4e-147 526.9 399 67.9
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.1e-147 525.4 369 73.7
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 1.2e-146 523.9 371 73.3
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.2e-146 523.9 427 65.6
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 2.1e-146 523.1 373 72.7
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 3.5e-146 522.3 394 71.3
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 6.0e-146 521.5 373 74.0
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 1.0e-145 520.8 374 72.7
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.3e-145 520.4 360 75.3
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 5.6e-144 515.0 363 70.2
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 6.2e-143 511.5 386 68.1
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 2.3e-142 509.6 390 70.8
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 3.1e-142 509.2 371 72.0
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 4.4e-141 505.4 363 71.9
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.9e-140 502.7 334 76.9
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 8.3e-140 501.1 462 59.3
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.7e-138 496.1 334 76.0
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 1.3e-132 477.2 368 65.5
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 5.4e-131 471.9 370 66.8
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 2.7e-130 469.5 403 62.5
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.1e-128 464.2 400 61.5
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 6.2e-127 458.4 361 65.9
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 1.4e-126 457.2 361 65.7
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 5.4e-123 445.3 364 64.3
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 4.8e-119 432.2 375 63.2
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 6.9e-118 428.3 391 60.9
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 4.5e-117 425.6 437 56.3
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 2.9e-116 422.9 391 59.8
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 4.2e-115 419.1 380 62.1
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 5.4e-115 418.7 323 67.8
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.6e-114 417.2 385 60.5
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 4.6e-114 415.6 378 60.3
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 7.9e-114 414.8 386 60.6
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 7.9e-114 414.8 386 60.6
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.8e-113 413.7 340 65.0
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 1.8e-113 413.7 323 66.9
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 1.5e-112 410.6 393 59.5
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.2e-101 374.4 386 54.1
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 1.2e-101 374.4 403 52.9
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 1.2e-101 374.4 403 52.9
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 4.5e-101 372.5 384 55.5
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 4.5e-101 372.5 384 55.5
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 6.5e-100 368.6 393 53.7
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 8.5e-92 341.7 345 58.8
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.1e-88 331.3 231 73.2
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 4.2e-83 312.8 240 69.6
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 2.6e-80 303.5 216 68.5
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 3.1e-70 270.0 360 41.4
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 7.0e-62 242.3 390 40.0
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 5.9e-61 239.2 161 78.3
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 9.4e-59 231.9 445 34.8
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 9.8e-56 221.9 139 78.4
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 2.5e-43 180.6 124 74.2
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 3.6e-42 176.8 117 77.8
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 1.0e-41 175.3 122 72.1
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 7.5e-40 169.1 362 36.5
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 2.9e-39 167.2 152 59.2
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.7e-39 166.8 398 35.7
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 1.9e-38 164.5 234 46.6
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 1.2e-32 145.2 132 59.8
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 7.8e-29 132.5 303 31.4
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 2.8e-26 124.0 126 54.8
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 1.8e-25 121.3 196 39.8
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 5.8e-24 116.3 78 73.1
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 5.1e-20 103.2 79 68.4
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 9.3e-14 82.4 239 31.0
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 2.1e-10 71.2 418 24.6
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 2.8e-10 70.9 48 70.8
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 2.4e-09 67.8 428 23.4
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 1.7e-07 61.6 273 24.2
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 3.8e-07 60.5 277 24.9
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 4.2e-06 57.0 54 55.6
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 4.2e-06 57.0 282 25.2


User provided reference genes

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