Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 1.4e-89 332.8 156 100.0
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 1.3e-61 240.0 142 77.5
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 2.6e-59 232.3 142 74.6
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 4.5e-59 231.5 142 75.4
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 4.5e-59 231.5 142 75.4
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 7.6e-59 230.7 140 74.3
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.7e-58 229.6 142 73.9
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 2.9e-58 228.8 140 74.3
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.4e-57 226.5 141 71.6
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 1.2e-56 223.4 140 72.1
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 1.6e-56 223.0 141 73.0
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 1.6e-56 223.0 143 73.4
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 1.0e-55 220.3 140 71.4
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 2.3e-55 219.2 140 72.9
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 2.3e-55 219.2 142 69.7
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 3.9e-55 218.4 143 70.6
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 3.9e-55 218.4 142 71.8
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 3.9e-55 218.4 142 71.1
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 5.1e-55 218.0 139 70.5
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 6.7e-55 217.6 140 72.1
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 8.7e-55 217.2 142 71.1
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 1.5e-54 216.5 140 69.3
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 1.9e-54 216.1 140 72.1
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 2.5e-54 215.7 141 69.5
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 5.6e-54 214.5 146 67.1
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 7.4e-54 214.2 143 69.9
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 9.6e-54 213.8 146 67.1
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 9.6e-54 213.8 146 67.1
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 1.3e-53 213.4 141 68.1
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 2.8e-53 212.2 139 70.5
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.8e-53 212.2 141 66.7
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 8.1e-53 210.7 141 66.0
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 1.1e-52 210.3 143 69.2
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 1.4e-52 209.9 140 68.6
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 2.4e-52 209.1 142 69.7
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 3.1e-52 208.8 141 68.1
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 4.0e-52 208.4 140 67.9
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 6.9e-52 207.6 140 66.4
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 6.9e-52 207.6 141 66.0
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 9.0e-52 207.2 141 67.4
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 1.5e-51 206.5 141 67.4
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 5.8e-51 204.5 140 69.3
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 5.8e-51 204.5 139 69.1
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 5.8e-51 204.5 139 67.6
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 9.9e-51 203.8 143 66.4
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 9.9e-51 203.8 139 69.1
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 9.9e-51 203.8 151 66.2
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.7e-50 203.0 140 65.7
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 2.9e-50 202.2 139 69.8
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 3.8e-50 201.8 137 67.9
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 3.8e-50 201.8 140 69.3
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 4.9e-50 201.4 140 68.6
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 6.4e-50 201.1 134 70.1
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 6.4e-50 201.1 139 68.3
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 6.4e-50 201.1 139 68.3
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 6.4e-50 201.1 140 65.7
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.1e-49 200.3 140 65.0
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 2.4e-49 199.1 140 66.4
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 2.4e-49 199.1 149 63.1
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 3.2e-49 198.7 140 66.4
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 5.5e-49 198.0 139 67.6
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 5.5e-49 198.0 139 67.6
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 5.5e-49 198.0 137 66.4
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 7.1e-49 197.6 139 66.2
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 1.2e-48 196.8 149 62.4
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 1.2e-48 196.8 149 62.4
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 1.2e-48 196.8 139 64.0
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 2.1e-48 196.1 143 66.4
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 2.1e-48 196.1 134 67.9
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 2.1e-48 196.1 141 64.5
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.7e-48 195.7 142 63.4
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 7.9e-48 194.1 136 65.4
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 1.3e-47 193.4 140 63.6
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.9e-47 191.8 138 63.8
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 3.9e-47 191.8 141 61.7
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 5.1e-47 191.4 141 63.8
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 6.7e-47 191.0 141 63.8
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.5e-46 189.9 142 64.1
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 1.5e-46 189.9 149 61.7
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 2.5e-46 189.1 142 64.1
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.3e-46 188.7 138 62.3
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 2.8e-45 185.7 132 63.6
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 6.2e-45 184.5 149 60.4
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.1e-44 183.7 141 60.3
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 1.8e-44 183.0 138 61.6
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.3e-42 176.8 116 69.0
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 3.8e-42 175.3 139 63.3
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 6.5e-42 174.5 131 61.8
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 8.4e-42 174.1 144 59.7
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 1.4e-41 173.3 144 59.0
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 1.4e-41 173.3 141 60.3
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 1.9e-41 172.9 145 60.0
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 7.1e-41 171.0 141 59.6
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 3.5e-40 168.7 144 59.7
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 5.1e-39 164.9 140 60.7
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 8.7e-39 164.1 144 58.3
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 1.5e-38 163.3 140 55.7
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 1.9e-38 162.9 141 56.7
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 1.9e-38 162.9 144 56.9
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 1.3e-37 160.2 144 56.9
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 1.3e-37 160.2 129 59.7
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 8.2e-37 157.5 144 50.0
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 1.1e-36 157.1 141 56.0
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 1.8e-36 156.4 141 52.5
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 7.7e-35 151.0 104 69.2
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 7.7e-35 151.0 145 53.1
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.9e-33 146.4 145 51.7
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 4.2e-33 145.2 143 55.9
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.6e-32 142.1 93 68.8
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 9.7e-30 134.0 131 52.7
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 2.2e-29 132.9 135 51.1
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 9.1e-28 127.5 132 54.5
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 7.7e-27 124.4 105 61.0
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 9.1e-20 100.9 51 82.4
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 2.6e-19 99.4 148 40.5
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.0e-18 97.4 64 73.4
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 3.3e-14 82.4 60 61.7
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 3.1e-12 75.9 140 35.7
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 1.2e-11 73.9 51 68.6


User provided reference genes

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