Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g27814_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D001420 1.7e-55 219.2 119 100.0
MBI15_g27815_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 2.0e-19 99.4 66 84.8
MBI19_g17783_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D004199 1.1e-12 77.0 42 90.5
MBI08_g05404_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D244236 9.1e-12 73.9 39 94.9
MBI01_g02258_MAGBIO Magnolia biondii HOM05D001429 ORTHO05D001420 2.0e-11 72.8 40 97.5
MBI19_g14704_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D001420 2.6e-11 72.4 40 97.5
MBI02_g32604_MAGBIO Magnolia biondii HOM05D000141 ORTHO05D004993 2.7e-08 62.4 37 89.2
MBI05_g00256_MAGBIO Magnolia biondii HOM05D003499 ORTHO05D244157 7.9e-08 60.8 32 93.8
GSVIVG01006736001 Vitis vinifera HOM05D000141 ORTHO05D004993 1.0e-07 60.5 35 91.4
ATR0665G420 Amborella trichopoda HOM05D000141 ORTHO05D004993 1.8e-07 59.7 34 91.2
Dinv36920 Davidia involucrata HOM05D000141 ORTHO05D004993 2.3e-07 59.3 34 91.2
Actinidia25312 Actinidia chinensis HOM05D000141 ORTHO05D004993 3.9e-07 58.5 34 91.2
CSS0021935 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004993 3.9e-07 58.5 34 91.2
CSS0023880 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D004993 3.9e-07 58.5 34 91.2
THA.LOC104819293 Tarenaya hassleriana HOM05D000141 ORTHO05D004993 3.9e-07 58.5 34 91.2
TPR.G14602 Trifolium pratense HOM05D000141 ORTHO05D004993 3.9e-07 58.5 34 88.2
Ca_22599_v3 Cicer arietinum L. HOM05D000141 ORTHO05D004993 8.8e-07 57.4 34 88.2
Glyma.08G279800 Glycine max HOM05D000141 ORTHO05D004993 8.8e-07 57.4 34 88.2
Glyma.18G146600 Glycine max HOM05D000141 ORTHO05D004993 8.8e-07 57.4 34 88.2
Lj4g0027101 Lotus japonicus HOM05D000141 ORTHO05D004993 8.8e-07 57.4 34 88.2
Phvul.003G289200 Phaseolus vulgaris HOM05D000141 ORTHO05D004993 8.8e-07 57.4 34 88.2
Psat4g119320 Pisum sativum HOM05D000141 ORTHO05D004993 8.8e-07 57.4 34 88.2
PGR031G3531 Punica granatum HOM05D000141 ORTHO05D004993 8.8e-07 57.4 34 88.2
Sabra07G0008100 Salix brachista HOM05D000141 ORTHO05D004993 8.8e-07 57.4 34 88.2
VMungo0251G3517 Vigna mungo HOM05D000141 ORTHO05D004993 8.8e-07 57.4 34 88.2
VMungo1215G0183 Vigna mungo HOM05D000141 ORTHO05D004993 8.8e-07 57.4 34 88.2
Cfa006890 Carpinus fangiana HOM05D000141 ORTHO05D004993 1.5e-06 56.6 34 88.2
Haze_03861 Corylus avellana HOM05D000141 ORTHO05D004993 1.5e-06 56.6 34 88.2
Rhsim10G0172400 Rhododendron simsii HOM05D000141 ORTHO05D004993 1.5e-06 56.6 34 88.2
arahy.Tifrunner.gnm1.ann1.029WE6 Arachis hypogaea HOM05D000141 ORTHO05D004993 2.0e-06 56.2 36 83.3
arahy.Tifrunner.gnm1.ann1.46GERB Arachis hypogaea HOM05D000141 ORTHO05D004993 2.0e-06 56.2 36 83.3
CiPaw.07G048100 Carya illinoinensis HOM05D000141 ORTHO05D004993 2.0e-06 56.2 34 88.2
CDE10G0717 Ceratophyllum demersum HOM05D000141 ORTHO05D004993 2.0e-06 56.2 34 85.3
COL.COLO4_27349 Corchorus olitorius HOM05D000141 ORTHO05D004993 2.0e-06 56.2 34 85.3
Glyma.02G041400 Glycine max HOM05D000141 ORTHO05D004993 2.0e-06 56.2 34 85.3
HanXRQChr13g0405071 Helianthus annuus HOM05D000141 ORTHO05D004993 2.0e-06 56.2 34 88.2
Lalb_Chr05g0228501 Lupinus albus HOM05D000141 ORTHO05D004993 2.0e-06 56.2 34 85.3
SalBow5G1291 Salvia bowleyana HOM05D000141 ORTHO05D004993 2.0e-06 56.2 34 88.2
TWI74G0717 Tripterygium wilfordii HOM05D000141 ORTHO05D004993 2.0e-06 56.2 34 85.3
TAR376G1001 Trochodendron aralioides HOM05D000141 ORTHO05D004993 2.0e-06 56.2 34 88.2
MSTRG.15690 Avicennia marina HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 88.2
Cpa.g.sc55.32 Carica papaya HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 85.3
ClCG01G018390 Citrullus lanatus HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 85.3
Migut.K00793 Erythranthe guttata HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 88.2
Glyma.01G023600 Glycine max HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 85.3
Oeu012465.2 Olea europaea HOM05D000141 ORTHO05D004993 2.6e-06 55.8 68 50.0
PSO541G3987 Papaver somniferum HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 85.3
PSO675G5554 Papaver somniferum HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 85.3
Psat0s1531g0080 Pisum sativum HOM05D000141 ORTHO05D017607 2.6e-06 55.8 34 85.3
Potri.007G010700 Populus trichocarpa HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 85.3
Sed0001145 Sechium edule HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 85.3
THA.LOC104801691 Tarenaya hassleriana HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 85.3
TWI77G1015 Tripterygium wilfordii HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 85.3
TAR628G0162 Trochodendron aralioides HOM05D000141 ORTHO05D004993 2.6e-06 55.8 33 90.9
unitig_748.g7037 Utricularia gibba HOM05D000141 ORTHO05D004993 2.6e-06 55.8 34 85.3
AL8G43040 Arabidopsis lyrata HOM05D000141 ORTHO05D004993 3.3e-06 55.5 34 82.4
CANSAT54G0158 Cannabis sativa HOM05D000141 ORTHO05D004993 3.3e-06 55.5 34 85.3
Medtr8g471180 Medicago truncatula HOM05D000141 ORTHO05D004993 3.3e-06 55.5 34 85.3
unitig_0.g1718 Utricularia gibba HOM05D000141 ORTHO05D004993 3.3e-06 55.5 34 85.3
HPP92_005965 Vanilla planifolia HOM05D000141 ORTHO05D004993 3.3e-06 55.5 34 85.3
AT5G10470 Arabidopsis thaliana HOM05D000141 ORTHO05D004993 4.4e-06 55.1 34 82.4
Duzib147G0545 Durio zibethinus HOM05D000141 ORTHO05D004993 4.4e-06 55.1 34 85.3
Thhalv10003525m.g Eutrema salsugineum HOM05D000141 ORTHO05D004993 4.4e-06 55.1 36 80.6
Gohir.A11G206600 Gossypium hirsutum HOM05D000141 ORTHO05D004993 4.4e-06 55.1 34 82.4
Gohir.D11G217000 Gossypium hirsutum HOM05D000141 ORTHO05D004993 4.4e-06 55.1 34 82.4
Gorai.007G233100 Gossypium raimondii HOM05D000141 ORTHO05D004993 4.4e-06 55.1 34 82.4
Lsat_1_v5_gn_3_61481 Lactuca sativa HOM05D000141 ORTHO05D004993 4.4e-06 55.1 34 85.3
Lj2C535G3 Lonicera japonica HOM05D000141 ORTHO05D004993 4.4e-06 55.1 34 88.2
A06p32290 Brassica napus HOM05D000141 ORTHO05D004993 5.7e-06 54.7 34 82.4
BraA06t26155Z Brassica rapa HOM05D000141 ORTHO05D004993 5.7e-06 54.7 34 82.4
Dinv13609 Davidia involucrata HOM05D000141 ORTHO05D004993 5.7e-06 54.7 34 85.3
Nitab4.5_0025132g0010 Nicotiana tabacum HOM05D000141 ORTHO05D004993 5.7e-06 54.7 34 85.3
Peaxi162Scf00778g00009 Petunia axillaris HOM05D000141 ORTHO05D004993 5.7e-06 54.7 34 85.3
Zm00001eb372980 Zea mays HOM05D000141 ORTHO05D004993 5.7e-06 54.7 34 82.4
Aa31LG1G16550 Aethionema arabicum HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 82.4
Aqoxy6G01438 Aquilegia oxysepala HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 85.3
AT5G65460 Arabidopsis thaliana HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 82.4
C03p60620 Brassica napus HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 82.4
Carub.0008s2631 Capsella rubella HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 82.4
CDE10G0963 Ceratophyllum demersum HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 82.4
Ciclev10024724m.g Citrus clementina HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 82.4
Eucgr.I00545 Eucalyptus grandis HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 85.3
Pp3c4_24010 Physcomitrium patens HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 82.4
Sp2g28540 Schrenkiella parvula HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 82.4
Thecc.01G091400 Theobroma cacao HOM05D000141 ORTHO05D004993 7.4e-06 54.3 34 82.4
AL6G20990 Arabidopsis lyrata HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
BcaB01g05532 Brassica carinata HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
BcaB01g06283 Brassica carinata HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
A03p04560 Brassica napus HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
C03p05120 Brassica napus HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
BraA03t09798Z Brassica rapa HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
Carub.0006s0895 Capsella rubella HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
CARHR202820 Cardamine hirsuta HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
MELO3C007717.2 Cucumis melo HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
CsaV3_6G045040 Cucumis sativus L. HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
Thhalv10012459m.g Eutrema salsugineum HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
QL06p035637 Quercus lobata HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 79.4
Sp6g32970 Schrenkiella parvula HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 82.4
SGA_v2.0_scaffold45G17236 Striga asiatica HOM05D000141 ORTHO05D004993 9.7e-06 53.9 34 85.3


User provided reference genes

Program Settings