Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g16751_MAGBIO Magnolia biondii HOM05D018116 ORTHO05D025787 2.7e-132 475.3 235 100.0
MBI07_g06914_MAGBIO Magnolia biondii HOM05D018116 ORTHO05D025787 4.4e-26 122.5 63 93.7
MBI18_g12054_MAGBIO Magnolia biondii HOM05D018116 ORTHO05D025787 9.8e-26 121.3 62 95.2
MBI06_g04707_MAGBIO Magnolia biondii HOM05D002360 ORTHO05D006689 1.2e-23 114.4 58 94.8
MBI08_g04811_MAGBIO Magnolia biondii HOM05D018116 ORTHO05D025787 5.0e-22 109.0 62 85.5
MBI06_g32758_MAGBIO Magnolia biondii HOM05D016337 ORTHO05D018022 2.4e-08 63.5 30 100.0
CSS0030828 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 3.5e-07 59.7 49 63.3
CSS0033161 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 3.5e-07 59.7 49 63.3
MBI05_g07852_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D001445 4.6e-07 59.3 49 63.3
Rhsim12G0168700 Rhododendron simsii HOM05D000434 ORTHO05D001445 4.6e-07 59.3 49 63.3
vmacro16650 Vaccinium macrocarpon HOM05D000434 ORTHO05D001445 4.6e-07 59.3 49 63.3
vmacro22880 Vaccinium macrocarpon HOM05D000434 ORTHO05D001445 4.6e-07 59.3 49 63.3
Dinv38517 Davidia involucrata HOM05D000434 ORTHO05D001445 6.0e-07 58.9 31 87.1
GSVIVG01007619001 Vitis vinifera HOM05D000434 ORTHO05D001445 7.8e-07 58.5 49 63.3
Atru.chr8.1919 Acer truncatum HOM05D000434 ORTHO05D001445 1.0e-06 58.2 49 61.2
ATR1120G050 Amborella trichopoda HOM05D000434 ORTHO05D001445 1.0e-06 58.2 36 72.2
Aqoxy4G03042 Aquilegia oxysepala HOM05D000434 ORTHO05D001445 1.0e-06 58.2 49 61.2
CSS0032725 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 1.0e-06 58.2 50 60.0
Cfa019251 Carpinus fangiana HOM05D000434 ORTHO05D001445 1.0e-06 58.2 49 57.1
Potri.006G244400 Populus trichocarpa HOM05D000434 ORTHO05D001445 1.0e-06 58.2 36 72.2
QL10p006390 Quercus lobata HOM05D000434 ORTHO05D001445 1.0e-06 58.2 49 57.1
Sabra06G0191300 Salix brachista HOM05D000434 ORTHO05D001445 1.0e-06 58.2 36 72.2
Actinidia08965 Actinidia chinensis HOM05D000434 ORTHO05D001445 1.3e-06 57.8 49 61.2
Ah.03g133420 Amaranthus hybridus HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 80.6
CSS0033160 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 87.1
CSS0038745 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 1.3e-06 57.8 49 63.3
CAN.G125.7 Capsicum annuum HOM05D000434 ORTHO05D001445 1.3e-06 57.8 49 65.3
Cpa.g.c31068.2 Carica papaya HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 87.1
CDE06G1387 Ceratophyllum demersum HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 87.1
CDE08G1119 Ceratophyllum demersum HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 87.1
DCAR_017892 Daucus carota HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 83.9
Dinv20585 Davidia involucrata HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 87.1
Dinv35650 Davidia involucrata HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 87.1
ECA232G0736 Erigeron canadensis HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 87.1
Manes.14G059500 Manihot esculenta HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 87.1
Phvul.003G206300 Phaseolus vulgaris HOM05D000434 ORTHO05D001445 1.3e-06 57.8 49 59.2
THA.LOC104806589 Tarenaya hassleriana HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 87.1
TAR622G0022 Trochodendron aralioides HOM05D000434 ORTHO05D001445 1.3e-06 57.8 31 87.1
CiPaw.12G032400 Carya illinoinensis HOM05D000434 ORTHO05D001445 1.7e-06 57.4 49 55.1
Cc06_g03100 Coffea canephora HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
DCAR_016445 Daucus carota HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
Duzib093G0189 Durio zibethinus HOM05D000434 ORTHO05D001445 1.7e-06 57.4 41 65.9
Duzib128G1901 Durio zibethinus HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
ECA248G0083 Erigeron canadensis HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
Migut.J00375 Erythranthe guttata HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
HanXRQChr01g0026571 Helianthus annuus HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
HanXRQChr11g0349441 Helianthus annuus HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
MBI10_g41878_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D001445 1.7e-06 57.4 49 61.2
MD15G1099600 Malus domestica HOM05D000434 ORTHO05D001445 1.7e-06 57.4 36 75.0
Oeu016500.2 Olea europaea HOM05D000434 ORTHO05D001445 1.7e-06 57.4 36 75.0
Peaxi162Scf00039g00818 Petunia axillaris HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
Potri.006G213400 Populus trichocarpa HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
Sabra06G0164400 Salix brachista HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
Hund06042 Selenicereus undatus HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 80.6
Sopen03g031150 Solanum pennellii HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
PGSC0003DMG401023904 Solanum tuberosum HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
TAR636G0497 Trochodendron aralioides HOM05D000434 ORTHO05D001445 1.7e-06 57.4 34 82.4
vmacro20113 Vaccinium macrocarpon HOM05D000434 ORTHO05D001445 1.7e-06 57.4 31 83.9
HPP92_009111 Vanilla planifolia HOM05D000434 ORTHO05D001445 1.7e-06 57.4 36 72.2
Zm00001eb160810 Zea mays HOM05D000434 ORTHO05D001445 1.7e-06 57.4 36 69.4
arahy.Tifrunner.gnm1.ann1.XWP5FV Arachis hypogaea HOM05D000434 ORTHO05D001445 2.3e-06 57.0 31 83.9
Glyma.05G042700 Glycine max HOM05D000434 ORTHO05D001445 2.3e-06 57.0 31 83.9
Glyma.17G125500 Glycine max HOM05D000434 ORTHO05D001445 2.3e-06 57.0 31 83.9
MBI01_g34156_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D001445 2.3e-06 57.0 36 72.2
Nn4g22558 Nelumbo nucifera HOM05D000434 ORTHO05D001445 2.3e-06 57.0 31 80.6
Phvul.003G206200 Phaseolus vulgaris HOM05D000434 ORTHO05D001445 2.3e-06 57.0 31 83.9
VMungo1215G0074 Vigna mungo HOM05D000434 ORTHO05D001445 2.3e-06 57.0 49 59.2
VMungo1215G3426 Vigna mungo HOM05D000434 ORTHO05D001445 2.3e-06 57.0 31 83.9
Actinidia13303 Actinidia chinensis HOM05D000434 ORTHO05D001445 3.0e-06 56.6 36 72.2
Ciclev10011767m.g Citrus clementina HOM05D000434 ORTHO05D001445 3.0e-06 56.6 49 59.2
Duzib084G1281 Durio zibethinus HOM05D000434 ORTHO05D001445 3.0e-06 56.6 31 83.9
Gohir.D04G118500 Gossypium hirsutum HOM05D000434 ORTHO05D001445 3.0e-06 56.6 34 76.5
Gohir.D05G051100 Gossypium hirsutum HOM05D000434 ORTHO05D001445 3.0e-06 56.6 36 72.2
Gorai.009G052800 Gossypium raimondii HOM05D000434 ORTHO05D001445 3.0e-06 56.6 36 72.2
Lsat_1_v5_gn_4_79220 Lactuca sativa HOM05D000434 ORTHO05D001445 3.0e-06 56.6 40 70.0
Nn2g10500 Nelumbo nucifera HOM05D000434 ORTHO05D001445 3.0e-06 56.6 31 83.9
Thecc.09G038100 Theobroma cacao HOM05D000434 ORTHO05D001445 3.0e-06 56.6 36 72.2
TWI39G0222 Tripterygium wilfordii HOM05D000434 ORTHO05D001445 3.0e-06 56.6 49 59.2
Actinidia19754 Actinidia chinensis HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 83.9
Aqoxy5G03700 Aquilegia oxysepala HOM05D000434 ORTHO05D001445 3.9e-06 56.2 49 57.1
CAN.G126.49 Capsicum annuum HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 83.9
CiPaw.11G017500 Carya illinoinensis HOM05D000434 ORTHO05D001445 3.9e-06 56.2 49 51.0
AUR62005508 Chenopodium quinoa HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 77.4
AUR62024234 Chenopodium quinoa HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 77.4
COL.COLO4_14875 Corchorus olitorius HOM05D000434 ORTHO05D009784 3.9e-06 56.2 31 83.9
Haze_07606 Corylus avellana HOM05D000434 ORTHO05D001445 3.9e-06 56.2 48 56.2
DCAR_003059 Daucus carota HOM05D000434 ORTHO05D001445 3.9e-06 56.2 36 69.4
HanXRQChr04g0101351 Helianthus annuus HOM05D000434 ORTHO05D001445 3.9e-06 56.2 40 67.5
Lsat_1_v5_gn_1_55940 Lactuca sativa HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 83.9
MD12G1136400 Malus domestica HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 80.6
Manes.08G075400 Manihot esculenta HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 80.6
Prupe.6G248800 Prunus persica HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 80.6
QL07p046660 Quercus lobata HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 83.9
SalBow3G1647 Salvia bowleyana HOM05D000434 ORTHO05D001445 3.9e-06 56.2 49 59.2
PGSC0003DMG400018195 Solanum tuberosum HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 83.9
TAR629G2949 Trochodendron aralioides HOM05D000434 ORTHO05D001445 3.9e-06 56.2 49 59.2
GSVIVG01025605001 Vitis vinifera HOM05D000434 ORTHO05D001445 3.9e-06 56.2 31 80.6
AL5G34500 Arabidopsis lyrata HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
AT3G53570 Arabidopsis thaliana HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
BcaB01g00262 Brassica carinata HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
BcaB02g07774 Brassica carinata HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
BcaC07g39719 Brassica carinata HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
BcaNung07018 Brassica carinata HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
BcaNung07159 Brassica carinata HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
A07p21730 Brassica napus HOM05D000434 ORTHO05D001361 5.0e-06 55.8 31 77.4
A09p46590 Brassica napus HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
C08p28910 Brassica napus HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
BolC6t37341H Brassica oleracea HOM05D000434 ORTHO05D001361 5.0e-06 55.8 31 77.4
BolC8t50493H Brassica oleracea HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
BraA07t29855Z Brassica rapa HOM05D000434 ORTHO05D001361 5.0e-06 55.8 31 77.4
BraA09t40123Z Brassica rapa HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
CSS0007889 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 83.9
CSS0047244 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D001445 5.0e-06 55.8 49 61.2
Carub.0005s2014 Capsella rubella HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
CAN.G436.4 Capsicum annuum HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
Cfa017443 Carpinus fangiana HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 83.9
CiPaw.10G141800 Carya illinoinensis HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 83.9
Ca_19425_v3 Cicer arietinum L. HOM05D000434 ORTHO05D001445 5.0e-06 55.8 34 73.5
COL.COLO4_23491 Corchorus olitorius HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
Haze_20720 Corylus avellana HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 83.9
Thhalv10010349m.g Eutrema salsugineum HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
Gohir.A04G079300 Gossypium hirsutum HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
Gohir.A07G055900 Gossypium hirsutum HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 87.1
Gohir.D07G060100 Gossypium hirsutum HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 87.1
Gorai.001G063800 Gossypium raimondii HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 87.1
Gorai.003G107300 Gossypium raimondii HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 83.9
Gorai.009G423700 Gossypium raimondii HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
Lalb_Chr08g0230881 Lupinus albus HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
Manes.12G020700 Manihot esculenta HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
Manes.16G069600 Manihot esculenta HOM05D000434 ORTHO05D001445 5.0e-06 55.8 36 66.7
Medtr4g104620 Medicago truncatula HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
Nn3g16666 Nelumbo nucifera HOM05D000434 ORTHO05D001445 5.0e-06 55.8 49 59.2
Psat4g061000 Pisum sativum HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
Prupe.1G454400 Prunus persica HOM05D000434 ORTHO05D001445 5.0e-06 55.8 36 72.2
Sp5g08770 Schrenkiella parvula HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
Hund25402 Selenicereus undatus HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 77.4
Solyc03g112050.4 Solanum lycopersicum HOM05D000434 ORTHO05D001445 5.0e-06 55.8 32 78.1
Thecc.03G116800 Theobroma cacao HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 83.9
Thecc.05G046300 Theobroma cacao HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
TPR.G37501 Trifolium pratense HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
TWI36G1613 Tripterygium wilfordii HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
TWI75G0536 Tripterygium wilfordii HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
TAR383G0676 Trochodendron aralioides HOM05D000434 ORTHO05D001445 5.0e-06 55.8 36 72.2
Zm00001eb183780 Zea mays HOM05D000434 ORTHO05D001445 5.0e-06 55.8 31 80.6
MSTRG.17913 Avicennia marina HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
BcaC08g44636 Brassica carinata HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 74.2
C06p21530 Brassica napus HOM05D000434 ORTHO05D001361 6.6e-06 55.5 31 74.2
CANSAT01G2604 Cannabis sativa HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
Glyma.04G189600 Glycine max HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 77.4
Gohir.A03G075100 Gossypium hirsutum HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
Lj2A101G53 Lonicera japonica HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
Lj7C709T6 Lonicera japonica HOM05D000434 ORTHO05D001445 6.6e-06 55.5 36 72.2
MBI06_g16052_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D001445 6.6e-06 55.5 49 59.2
MD14G1169100 Malus domestica HOM05D000434 ORTHO05D001445 6.6e-06 55.5 29 86.2
Oeu057320.1 Olea europaea HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
Os01g0590900 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D001445 6.6e-06 55.5 36 66.7
PSO017G0924 Papaver somniferum HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 83.9
PSO478G1382 Papaver somniferum HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 83.9
Potri.016G079900 Populus trichocarpa HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
Prupe.1G242500 Prunus persica HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
QL03p056826 Quercus lobata HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
Rhsim05G0187100 Rhododendron simsii HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
Sabra16G0085800 Salix brachista HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
Sabra16G0087900 Salix brachista HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
SMO200G0246 Selaginella moellendorffii HOM05D000434 ORTHO05D001445 6.6e-06 55.5 31 80.6
arahy.Tifrunner.gnm1.ann1.FP7IK1 Arachis hypogaea HOM05D000434 ORTHO05D001445 8.6e-06 55.1 30 83.3
CARHR163480 Cardamine hirsuta HOM05D000434 ORTHO05D001445 8.6e-06 55.1 31 74.2
Cfa009239 Carpinus fangiana HOM05D000434 ORTHO05D001445 8.6e-06 55.1 31 83.9
Cc11_g16010 Coffea canephora HOM05D000434 ORTHO05D001445 8.6e-06 55.1 31 77.4
Haze_12274 Corylus avellana HOM05D000434 ORTHO05D001445 8.6e-06 55.1 31 83.9
Eucgr.H02471 Eucalyptus grandis HOM05D000434 ORTHO05D001445 8.6e-06 55.1 31 77.4
FvH4_2g36300 Fragaria vesca HOM05D000434 ORTHO05D001445 8.6e-06 55.1 36 72.2
FvH4_6g14570 Fragaria vesca HOM05D000434 ORTHO05D001445 8.6e-06 55.1 29 82.8
FAN02G1597 Fragaria x ananassa HOM05D000434 ORTHO05D001445 8.6e-06 55.1 29 82.8
FAN15G3666 Fragaria x ananassa HOM05D000434 ORTHO05D001445 8.6e-06 55.1 36 72.2
FAN20G0522 Fragaria x ananassa HOM05D000434 ORTHO05D001445 8.6e-06 55.1 36 72.2
FAN27G0133 Fragaria x ananassa HOM05D000434 ORTHO05D001445 8.6e-06 55.1 36 72.2
MD06G1164200 Malus domestica HOM05D000434 ORTHO05D001445 8.6e-06 55.1 29 82.8
MD16G1103500 Malus domestica HOM05D000434 ORTHO05D001445 8.6e-06 55.1 31 77.4
Peaxi162Scf00801g00048 Petunia axillaris HOM05D000434 ORTHO05D001445 8.6e-06 55.1 31 77.4
Potri.012G089700 Populus trichocarpa HOM05D000434 ORTHO05D001445 8.6e-06 55.1 39 66.7
RcHm_v2.0_Chr3g0467621 Rosa chinensis HOM05D000434 ORTHO05D001445 8.6e-06 55.1 29 82.8
RcHm_v2.0_Chr6g0305581 Rosa chinensis HOM05D000434 ORTHO05D001445 8.6e-06 55.1 36 72.2
unitig_37.g12747 Utricularia gibba HOM05D000434 ORTHO05D001445 8.6e-06 55.1 31 80.6
Zm00001eb148610 Zea mays HOM05D000434 ORTHO05D001445 8.6e-06 55.1 31 80.6


User provided reference genes

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