Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g08404_MAGBIO Magnolia biondii HOM05D005382 ORTHO05D006795 9.4e-116 420.2 216 100.0
Nn8g40079 Nelumbo nucifera HOM05D005382 ORTHO05D006795 1.0e-69 267.3 212 70.3
Nn8g40087 Nelumbo nucifera HOM05D005382 ORTHO05D006795 1.2e-67 260.4 212 68.4
Manes.11G069200 Manihot esculenta HOM05D005382 ORTHO05D006795 4.7e-67 258.5 213 65.3
Potri.003G184925 Populus trichocarpa HOM05D005382 ORTHO05D006795 8.0e-67 257.7 203 67.5
TAR625G1145 Trochodendron aralioides HOM05D005382 ORTHO05D006795 2.3e-66 256.1 220 64.1
Potri.001G041900 Populus trichocarpa HOM05D005382 ORTHO05D006795 3.1e-66 255.8 203 68.0
Gorai.007G085500 Gossypium raimondii HOM05D005382 ORTHO05D006795 9.8e-65 250.8 207 68.1
Thecc.06G046600 Theobroma cacao HOM05D005382 ORTHO05D006795 1.3e-64 250.4 214 66.4
Gohir.A11G075200 Gossypium hirsutum HOM05D005382 ORTHO05D006795 2.9e-64 249.2 207 67.6
PGR102G0492 Punica granatum HOM05D005382 ORTHO05D006795 2.9e-64 249.2 204 66.7
Sabra03G0135500 Salix brachista HOM05D005382 ORTHO05D006795 8.3e-64 247.7 202 67.3
COL.COLO4_26772 Corchorus olitorius HOM05D005382 ORTHO05D006795 1.4e-63 246.9 219 64.4
Sabra01G0028700 Salix brachista HOM05D005382 ORTHO05D006795 1.4e-63 246.9 205 67.3
FAN05G5289 Fragaria x ananassa HOM05D005382 ORTHO05D006795 3.2e-63 245.7 213 62.4
CiPaw.02G163400 Carya illinoinensis HOM05D005382 ORTHO05D006795 5.4e-63 245.0 205 65.9
FvH4_6g28270 Fragaria vesca HOM05D005382 ORTHO05D006795 7.0e-63 244.6 213 62.0
CDE04G1090 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 2.0e-62 243.0 201 65.2
Nitab4.5_0002700g0060 Nicotiana tabacum HOM05D005382 ORTHO05D006795 2.7e-62 242.7 207 63.8
FAN09G0036 Fragaria x ananassa HOM05D005382 ORTHO05D006795 1.0e-61 240.7 213 62.0
RcHm_v2.0_Chr2g0132311 Rosa chinensis HOM05D005382 ORTHO05D006795 1.0e-61 240.7 211 61.6
GSVIVG01016103001 Vitis vinifera HOM05D005382 ORTHO05D006795 1.0e-61 240.7 193 66.8
Nitab4.5_0004738g0090 Nicotiana tabacum HOM05D005382 ORTHO05D006795 1.3e-61 240.4 207 62.8
Sc12g0008250 Simmondsia chinensis HOM05D005382 ORTHO05D006795 1.3e-61 240.4 215 64.2
CiPaw.01G256500 Carya illinoinensis HOM05D005382 ORTHO05D006795 1.7e-61 240.0 205 63.4
Hma1.2p1_0329F.1_g127290 Hydrangea macrophylla HOM05D005382 ORTHO05D006795 1.7e-61 240.0 196 64.8
TWI12G1456 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 2.3e-61 239.6 204 64.2
Actinidia08935 Actinidia chinensis HOM05D005382 ORTHO05D006795 3.9e-61 238.8 213 60.6
DCAR_021374 Daucus carota HOM05D005382 ORTHO05D006795 5.0e-61 238.4 203 62.6
Lsat_1_v5_gn_1_30801 Lactuca sativa HOM05D005382 ORTHO05D006795 8.6e-61 237.7 213 63.8
PSO782G0145 Papaver somniferum HOM05D005382 ORTHO05D006795 8.6e-61 237.7 217 63.6
Glyma.08G220400 Glycine max HOM05D005382 ORTHO05D006795 2.5e-60 236.1 202 64.9
CAN.G1008.7 Capsicum annuum HOM05D005382 ORTHO05D006795 3.3e-60 235.7 211 59.7
Cc04_g05300 Coffea canephora HOM05D005382 ORTHO05D006795 3.3e-60 235.7 205 62.9
ClCG09G003490 Citrullus lanatus HOM05D005382 ORTHO05D006795 5.6e-60 235.0 202 63.9
MD17G1226400 Malus domestica HOM05D005382 ORTHO05D006795 9.5e-60 234.2 207 62.8
Medtr4g007700 Medicago truncatula HOM05D005382 ORTHO05D006795 1.2e-59 233.8 193 65.3
BcaNung04166 Brassica carinata HOM05D005382 ORTHO05D006795 1.6e-59 233.4 205 62.4
Ciclev10026461m.g Citrus clementina HOM05D005382 ORTHO05D006795 1.6e-59 233.4 203 63.1
Gohir.D11G079900 Gossypium hirsutum HOM05D005382 ORTHO05D006795 2.8e-59 232.6 184 69.6
PSO063G0682 Papaver somniferum HOM05D005382 ORTHO05D006795 2.8e-59 232.6 217 63.1
MELO3C023486.2 Cucumis melo HOM05D005382 ORTHO05D006795 8.1e-59 231.1 202 63.4
ECA232G4196 Erigeron canadensis HOM05D005382 ORTHO05D006795 8.1e-59 231.1 207 64.3
Eucgr.F03985 Eucalyptus grandis HOM05D005382 ORTHO05D006795 8.1e-59 231.1 208 62.5
Peaxi162Scf00314g01032 Petunia axillaris HOM05D005382 ORTHO05D006795 1.8e-58 229.9 209 58.9
Manes.04G100900 Manihot esculenta HOM05D005382 ORTHO05D006795 2.3e-58 229.6 201 64.7
Rhsim08G0203100 Rhododendron simsii HOM05D005382 ORTHO05D006795 2.3e-58 229.6 218 60.1
Aa31LG4G1250 Aethionema arabicum HOM05D005382 ORTHO05D006795 3.1e-58 229.2 200 63.5
C06p29630 Brassica napus HOM05D005382 ORTHO05D006795 4.0e-58 228.8 204 62.7
THA.LOC104808172 Tarenaya hassleriana HOM05D005382 ORTHO05D006795 5.2e-58 228.4 210 61.4
Eucgr.J03130 Eucalyptus grandis HOM05D005382 ORTHO05D006795 6.8e-58 228.0 191 64.4
FAN14G0578 Fragaria x ananassa HOM05D005382 ORTHO05D006795 6.8e-58 228.0 188 64.4
HanXRQChr09g0274181 Helianthus annuus HOM05D005382 ORTHO05D006795 6.8e-58 228.0 199 62.3
MD09G1227600 Malus domestica HOM05D005382 ORTHO05D006795 1.5e-57 226.9 206 60.7
Lj3g0027435 Lotus japonicus HOM05D005382 ORTHO05D006795 2.0e-57 226.5 201 61.7
MSTRG.22842 Avicennia marina HOM05D005382 ORTHO05D006795 3.4e-57 225.7 215 58.6
CsaV3_7G031710 Cucumis sativus L. HOM05D005382 ORTHO05D006795 3.4e-57 225.7 205 62.0
A07p26960 Brassica napus HOM05D005382 ORTHO05D006795 4.4e-57 225.3 205 61.5
BraA07t30340Z Brassica rapa HOM05D005382 ORTHO05D006795 4.4e-57 225.3 205 61.5
Lalb_Chr25g0278731 Lupinus albus HOM05D005382 ORTHO05D006795 4.4e-57 225.3 191 61.3
BolC6t38128H Brassica oleracea HOM05D005382 ORTHO05D006795 5.8e-57 224.9 205 61.5
AUR62032996 Chenopodium quinoa HOM05D005382 ORTHO05D006795 9.8e-57 224.2 189 64.6
ECA247G2189 Erigeron canadensis HOM05D005382 ORTHO05D006795 9.8e-57 224.2 198 61.1
Rhsim12G0185400 Rhododendron simsii HOM05D005382 ORTHO05D006795 1.3e-56 223.8 248 54.4
Sed0008280 Sechium edule HOM05D005382 ORTHO05D006795 1.7e-56 223.4 209 60.3
HPP92_010348 Vanilla planifolia HOM05D005382 ORTHO05D006795 1.7e-56 223.4 196 62.8
BcaB02g07237 Brassica carinata HOM05D005382 ORTHO05D006795 2.2e-56 223.0 205 60.5
A07p44750 Brassica napus HOM05D005382 ORTHO05D006795 2.2e-56 223.0 201 61.2
BraA07t31983Z Brassica rapa HOM05D005382 ORTHO05D006795 2.2e-56 223.0 201 61.2
EL10Ac8g19398 Beta vulgaris HOM05D005382 ORTHO05D006795 2.9e-56 222.6 197 63.5
AL2G40440 Arabidopsis lyrata HOM05D005382 ORTHO05D006795 3.7e-56 222.2 195 61.5
Dinv21426 Davidia involucrata HOM05D005382 ORTHO05D006795 3.7e-56 222.2 195 63.1
VMungo0647G2390 Vigna mungo HOM05D005382 ORTHO05D006795 3.7e-56 222.2 205 61.5
Thhalv10019121m.g Eutrema salsugineum HOM05D005382 ORTHO05D006795 4.9e-56 221.9 197 62.4
Glyma.07G021400 Glycine max HOM05D005382 ORTHO05D006795 4.9e-56 221.9 214 61.7
HanXRQChr04g0100021 Helianthus annuus HOM05D005382 ORTHO05D006795 4.9e-56 221.9 209 57.4
Phvul.008G253200 Phaseolus vulgaris HOM05D005382 ORTHO05D006795 4.9e-56 221.9 207 62.3
SGA_v2.0_scaffold515G52664 Striga asiatica HOM05D003096 ORTHO05D003521 4.9e-56 221.9 212 58.0
Sopen03g036580 Solanum pennellii HOM05D005382 ORTHO05D006795 6.4e-56 221.5 207 60.4
MSTRG.9395 Avicennia marina HOM05D005382 ORTHO05D006795 8.3e-56 221.1 189 62.4
Migut.I00626 Erythranthe guttata HOM05D005382 ORTHO05D006795 8.3e-56 221.1 212 59.0
C06p53570 Brassica napus HOM05D005382 ORTHO05D006795 1.4e-55 220.3 199 59.3
CSS0039254 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 1.4e-55 220.3 218 59.2
Carub.0002s2660 Capsella rubella HOM05D005382 ORTHO05D006795 1.4e-55 220.3 194 63.4
BcaC08g47533 Brassica carinata HOM05D005382 ORTHO05D006795 2.4e-55 219.5 203 58.6
BolC6t40373H Brassica oleracea HOM05D005382 ORTHO05D006795 2.4e-55 219.5 203 58.6
Lsat_1_v5_gn_4_85061 Lactuca sativa HOM05D005382 ORTHO05D006795 2.4e-55 219.5 209 59.8
Sp5g34800 Schrenkiella parvula HOM05D005382 ORTHO05D006795 2.4e-55 219.5 204 60.8
AT1G80940 Arabidopsis thaliana HOM05D005382 ORTHO05D006795 4.1e-55 218.8 219 58.4
BcaB02g08711 Brassica carinata HOM05D005382 ORTHO05D006795 5.4e-55 218.4 201 60.7
FAN02G4537 Fragaria x ananassa HOM05D005382 ORTHO05D006795 7.1e-55 218.0 184 66.8
Lj5A81T85 Lonicera japonica HOM05D005382 ORTHO05D006795 3.5e-54 215.7 140 80.7
Solyc03g117670.4 Solanum lycopersicum HOM05D005382 ORTHO05D006795 4.6e-54 215.3 214 58.4
ATR0580G392 Amborella trichopoda HOM05D005382 ORTHO05D006795 7.8e-54 214.5 206 61.2
Cfa001857 Carpinus fangiana HOM05D005382 ORTHO05D006795 7.8e-54 214.5 180 65.0
MSTRG.11221 Avicennia marina HOM05D005382 ORTHO05D006795 1.0e-53 214.2 215 56.3
Lalb_Chr01g0011991 Lupinus albus HOM05D005382 ORTHO05D006795 8.6e-53 211.1 209 57.4
TPR.G3367 Trifolium pratense HOM05D005382 ORTHO05D006795 8.6e-53 211.1 178 63.5
SalBow1G1272 Salvia bowleyana HOM05D005382 ORTHO05D006795 1.9e-52 209.9 181 62.4
Duzib235G0288 Durio zibethinus HOM05D005382 ORTHO05D006795 3.3e-52 209.1 130 84.6
vmacro16842 Vaccinium macrocarpon HOM05D005382 ORTHO05D006795 3.3e-52 209.1 179 65.9
Haze_16689 Corylus avellana HOM05D005382 ORTHO05D006795 1.2e-51 207.2 156 70.5
QL05p036845 Quercus lobata HOM05D005382 ORTHO05D006795 1.2e-51 207.2 180 64.4
SGA_v2.0_scaffold74G24593 Striga asiatica HOM05D005382 ORTHO05D006795 2.1e-51 206.5 189 58.7
Duzib192G0805 Durio zibethinus HOM05D005382 ORTHO05D006795 2.8e-51 206.1 130 82.3
TWI75G0559 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 8.1e-51 204.5 178 65.7
Prupe.3G103600 Prunus persica HOM05D005382 ORTHO05D006795 1.8e-50 203.4 150 74.7
CDE07G1687 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 5.2e-50 201.8 130 80.8
Psat7g262200 Pisum sativum HOM05D005382 ORTHO05D006795 1.2e-49 200.7 178 62.4
CARHR073510 Cardamine hirsuta HOM05D005382 ORTHO05D006795 5.8e-49 198.4 153 69.3
PGSC0003DMG400014155 Solanum tuberosum HOM05D005382 ORTHO05D006795 7.6e-49 198.0 139 74.8
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 1.3e-48 197.2 158 69.0
Oeu003125.1 Olea europaea HOM05D005382 ORTHO05D006795 1.3e-48 197.2 193 57.0
arahy.Tifrunner.gnm1.ann1.7IZ6IW Arachis hypogaea HOM05D005382 ORTHO05D006795 2.9e-48 196.1 205 58.5
arahy.Tifrunner.gnm1.ann1.HUQR60 Arachis hypogaea HOM05D005382 ORTHO05D006795 2.9e-48 196.1 205 58.5
Os02g0793900 Oryza sativa ssp. japonica HOM05D005382 ORTHO05D006795 1.1e-47 194.1 193 59.6
Oeu051555.1 Olea europaea HOM05D005382 ORTHO05D006795 2.4e-47 193.0 159 65.4
Zm00001eb257680 Zea mays HOM05D005382 ORTHO05D006795 3.2e-47 192.6 215 57.2
CANSAT56G2690 Cannabis sativa HOM05D005382 ORTHO05D006795 2.1e-43 179.9 212 51.9
Cpa.g.c28380.1 Carica papaya HOM05D005382 ORTHO05D006795 1.4e-42 177.2 128 75.0
SEGI_41275 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 1.5e-41 173.7 137 67.2
Mapoly0128s0009 Marchantia polymorpha HOM05D005382 ORTHO05D006795 8.4e-40 167.9 140 67.1
SMO145G0139 Selaginella moellendorffii HOM05D005382 ORTHO05D006795 3.2e-39 166.0 134 62.7
Ah.14g085670 Amaranthus hybridus HOM05D005382 ORTHO05D006795 2.1e-38 163.3 190 52.1
Pp3c25_9780 Physcomitrium patens HOM05D005382 ORTHO05D006795 5.1e-37 158.7 128 64.8
Pp3c16_25700 Physcomitrium patens HOM05D005382 ORTHO05D006795 1.5e-36 157.1 128 64.1
SEGI_02613 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 2.2e-32 143.3 130 58.5
Hund12559 Selenicereus undatus HOM05D005382 ORTHO05D006795 9.3e-31 137.9 136 55.9
BcaB07g33703 Brassica carinata HOM05D005382 ORTHO05D006795 2.1e-27 126.7 134 53.7
Atru.chr1.2804_Atru.chr1.2805 Acer truncatum HOM05D005382 ORTHO05D006795 3.6e-27 125.9 212 41.5
CSS0015514 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 2.6e-25 119.8 73 83.6
Actinidia36864 Actinidia chinensis HOM05D005382 ORTHO05D006795 4.5e-25 119.0 202 39.1
unitig_22.g6275 Utricularia gibba HOM05D005382 ORTHO05D006795 6.0e-22 108.6 79 72.2
BcaB07g33704 Brassica carinata HOM05D005382 ORTHO05D006795 1.2e-17 94.4 85 60.0
BcaB07g33705 Brassica carinata HOM05D005382 ORTHO05D006795 1.2e-17 94.4 85 60.0
AagrBONN_evm.TU.Sc2ySwM_117.2014 Anthoceros agrestis HOM05D005382 ORTHO05D006795 1.0e-16 91.3 85 63.5
Actinidia26580 Actinidia chinensis HOM05D005382 ORTHO05D006795 8.4e-16 88.2 71 66.2
TPR.G1583 Trifolium pratense HOM05D005382 ORTHO05D006795 4.5e-09 65.9 45 75.6


User provided reference genes

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