Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI15_g05813_MAGBIO Magnolia biondii HOM05D020261 ORTHO05D014916 1.2e-21 105.5 50 100.0
MBI13_g31547_MAGBIO Magnolia biondii HOM05D000810 ORTHO05D003737 3.8e-20 100.5 50 94.0
Haze_21980 Corylus avellana HOM05D000810 ORTHO05D003737 9.4e-19 95.9 50 88.0
EL10Ac9g22730 Beta vulgaris HOM05D002867 ORTHO05D026981 2.0e-16 88.2 50 80.0
EL10Ac5g11359 Beta vulgaris HOM05D002867 ORTHO05D014916 2.5e-16 87.8 50 80.0
Hund26319 Selenicereus undatus HOM05D000810 ORTHO05D003737 5.7e-16 86.7 49 81.6
EL10Ac1g01446 Beta vulgaris HOM05D002867 ORTHO05D014916 9.7e-16 85.9 50 78.0
EL10As1g23080 Beta vulgaris HOM05D000810 ORTHO05D003737 2.2e-15 84.7 50 76.0
EL10Ac7g16970 Beta vulgaris HOM05D000810 ORTHO05D014916 8.2e-15 82.8 48 77.1
PSO541G3657 Papaver somniferum HOM05D000810 ORTHO05D014916 1.1e-14 82.4 48 81.2
Oeu038102.1 Olea europaea HOM05D000810 ORTHO05D003737 6.9e-14 79.7 50 78.0
Glyma.17G060832 Glycine max HOM05D000810 ORTHO05D014916 1.2e-13 79.0 43 83.7
Actinidia29235 Actinidia chinensis HOM05D000810 ORTHO05D001064 1.5e-13 78.6 49 73.5
Actinidia36890 Actinidia chinensis HOM05D000810 ORTHO05D001064 1.5e-13 78.6 49 73.5
Atru.chr1.2646 Acer truncatum HOM05D000810 ORTHO05D003737 2.0e-13 78.2 49 71.4
Oeu020825.2 Olea europaea HOM05D000810 ORTHO05D001064 2.0e-13 78.2 50 76.0
Rhsim08G0250700 Rhododendron simsii HOM05D000810 ORTHO05D003737 2.9e-12 74.3 49 75.5
vmacro07127 Vaccinium macrocarpon HOM05D000810 ORTHO05D001064 6.5e-12 73.2 76 52.6
HanXRQChr12g0383721 Helianthus annuus HOM05D000810 ORTHO05D014916 1.1e-11 72.4 49 67.3
QL11p004807 Quercus lobata HOM05D000810 ORTHO05D003737 1.1e-11 72.4 39 82.1
MBI11_g28613_MAGBIO Magnolia biondii HOM05D020261 ORTHO05D014916 5.5e-11 70.1 38 86.8
Lj9A543G60 Lonicera japonica HOM05D000810 ORTHO05D003737 7.2e-11 69.7 49 71.4
SGA_v2.0_scaffold51G18704 Striga asiatica HOM05D000810 ORTHO05D001064 9.4e-11 69.3 49 67.3
Os12g0574400 Oryza sativa ssp. japonica HOM05D000810 ORTHO05D014916 1.6e-10 68.6 49 59.2
QL05p088870 Quercus lobata HOM05D000810 ORTHO05D003737 1.6e-10 68.6 40 82.5
Dinv20332 Davidia involucrata HOM05D000810 ORTHO05D003737 2.7e-10 67.8 41 78.0
AUR62021332 Chenopodium quinoa HOM05D000810 ORTHO05D003737 3.6e-10 67.4 41 70.7
Hma1.2p1_0022F.1_g014710 Hydrangea macrophylla HOM05D000810 ORTHO05D003737 3.6e-10 67.4 38 78.9
Lj8A573G8 Lonicera japonica HOM05D000810 ORTHO05D003737 6.1e-10 66.6 49 67.3
Lj4g0008073 Lotus japonicus HOM05D000810 ORTHO05D003737 1.0e-09 65.9 36 80.6
vmacro18740 Vaccinium macrocarpon HOM05D000810 ORTHO05D003737 2.3e-09 64.7 36 83.3
arahy.Tifrunner.gnm1.ann1.6TJY4I Arachis hypogaea HOM05D000810 ORTHO05D003737 3.0e-09 64.3 36 77.8
arahy.Tifrunner.gnm1.ann1.C9BI3G Arachis hypogaea HOM05D000810 ORTHO05D003737 3.0e-09 64.3 36 77.8
MBI11_g45431_MAGBIO Magnolia biondii HOM05D020261 ORTHO05D014916 3.0e-09 64.3 38 76.3
Lsat_1_v5_gn_8_69540 Lactuca sativa HOM05D000810 ORTHO05D003737 5.1e-09 63.5 38 76.3
Ah.14g083660 Amaranthus hybridus HOM05D000476 ORTHO05D004987 2.6e-08 61.2 39 69.2
EL10Ac8g18318 Beta vulgaris HOM05D000810 ORTHO05D003737 3.3e-08 60.8 36 72.2
AUR62033247 Chenopodium quinoa HOM05D000810 ORTHO05D003737 7.4e-08 59.7 36 69.4
SGA_v2.0_scaffold2G01364 Striga asiatica HOM05D000810 ORTHO05D001064 1.3e-07 58.9 36 72.2
SGA_v2.0_scaffold46G17347 Striga asiatica HOM05D000810 ORTHO05D003737 1.7e-07 58.5 40 67.5
Glyma.11G137000 Glycine max HOM05D000810 ORTHO05D001064 6.3e-07 56.6 32 75.0
AUR62001335 Chenopodium quinoa HOM05D000810 ORTHO05D003737 8.2e-07 56.2 33 69.7
AUR62025670 Chenopodium quinoa HOM05D000810 ORTHO05D003737 8.2e-07 56.2 33 69.7
Nitab4.5_0001472g0120 Nicotiana tabacum HOM05D000810 ORTHO05D001064 8.2e-07 56.2 38 68.4
Nitab4.5_0022700g0010 Nicotiana tabacum HOM05D000810 ORTHO05D001064 8.2e-07 56.2 34 73.5
HanXRQChr11g0345701 Helianthus annuus HOM05D000810 ORTHO05D001064 1.4e-06 55.5 45 60.0
Actinidia26729 Actinidia chinensis HOM05D000810 ORTHO05D001064 1.8e-06 55.1 32 75.0
HanXRQChr05g0140941 Helianthus annuus HOM05D000810 ORTHO05D003737 1.8e-06 55.1 32 75.0
Ah.08g217800 Amaranthus hybridus HOM05D000810 ORTHO05D003737 2.4e-06 54.7 33 66.7
vmacro03039 Vaccinium macrocarpon HOM05D000810 ORTHO05D001064 2.4e-06 54.7 49 57.1
Actinidia13889 Actinidia chinensis HOM05D000810 ORTHO05D001064 4.1e-06 53.9 36 69.4


User provided reference genes

Program Settings