Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g48285_MAGBIO Magnolia biondii HOM05D000458 ORTHO05D014366 1.5e-95 352.8 177 100.0
MBI14_g41163_MAGBIO Magnolia biondii HOM05D000458 ORTHO05D014366 1.1e-42 177.2 95 100.0
TAR585G0001 Trochodendron aralioides HOM05D000458 ORTHO05D000951 1.0e-35 154.1 129 63.6
TAR383G0841 Trochodendron aralioides HOM05D000458 ORTHO05D000951 6.9e-32 141.4 129 58.1
Atru.chr1.2824 Acer truncatum HOM05D000458 ORTHO05D000951 7.6e-31 137.9 129 58.9
Ciclev10025035m.g Citrus clementina HOM05D000458 ORTHO05D000951 2.2e-30 136.3 120 60.8
Glyma.08G223700 Glycine max HOM05D000458 ORTHO05D000951 1.8e-27 126.7 121 57.9
Ca_20963_v3 Cicer arietinum L. HOM05D000458 ORTHO05D000951 3.9e-27 125.6 114 57.0
Glyma.07G002900 Glycine max HOM05D000458 ORTHO05D000951 8.7e-27 124.4 123 55.3
Lj3g0027480 Lotus japonicus HOM05D000458 ORTHO05D000951 8.7e-27 124.4 131 55.0
MSTRG.22835 Avicennia marina HOM05D000458 ORTHO05D000951 1.1e-26 124.0 128 50.8
Hma1.2p1_1774F.1_g301810 Hydrangea macrophylla HOM05D000458 ORTHO05D014366 1.1e-26 124.0 112 59.8
Medtr4g005730 Medicago truncatula HOM05D000458 ORTHO05D000951 1.1e-26 124.0 124 55.6
Manes.04G098600 Manihot esculenta HOM05D000458 ORTHO05D000951 1.5e-26 123.6 127 55.1
Thecc.06G133400 Theobroma cacao HOM05D000458 ORTHO05D000951 1.9e-26 123.2 132 53.0
CiPaw.01G051500 Carya illinoinensis HOM05D000458 ORTHO05D000951 3.3e-26 122.5 135 51.1
Lj5A83G38 Lonicera japonica HOM05D000458 ORTHO05D000951 3.3e-26 122.5 128 51.6
Lj9C490T6 Lonicera japonica HOM05D000458 ORTHO05D014366 3.3e-26 122.5 116 56.9
TPR.G38829 Trifolium pratense HOM05D000458 ORTHO05D000951 4.3e-26 122.1 115 55.7
DCAR_016321 Daucus carota HOM05D000696 ORTHO05D003201 5.6e-26 121.7 127 55.9
Haze_15241 Corylus avellana HOM05D000458 ORTHO05D000951 9.6e-26 120.9 131 51.1
QL05p081629 Quercus lobata HOM05D000458 ORTHO05D000951 9.6e-26 120.9 113 55.8
CSS0026060 Camellia sinensis var. sinensis HOM05D000458 ORTHO05D000951 1.6e-25 120.2 128 51.6
Psat7g264440 Pisum sativum HOM05D000458 ORTHO05D000951 8.1e-25 117.9 126 52.4
Phvul.010G163200 Phaseolus vulgaris HOM05D000458 ORTHO05D000951 1.1e-24 117.5 128 53.9
Gohir.A05G143300 Gossypium hirsutum HOM05D000458 ORTHO05D000951 1.4e-24 117.1 131 52.7
Gohir.D05G145700 Gossypium hirsutum HOM05D000458 ORTHO05D000951 6.9e-24 114.8 113 58.4
Gorai.009G149600 Gossypium raimondii HOM05D000458 ORTHO05D000951 6.9e-24 114.8 113 58.4
Manes.11G070900 Manihot esculenta HOM05D000458 ORTHO05D000951 6.9e-24 114.8 129 53.5
Lalb_Chr25g0278571 Lupinus albus HOM05D000458 ORTHO05D000951 9.0e-24 114.4 128 55.5
Rhsim08G0201300 Rhododendron simsii HOM05D000696 ORTHO05D003201 9.0e-24 114.4 129 53.5
Duzib160G0242 Durio zibethinus HOM05D000458 ORTHO05D000951 1.5e-23 113.6 127 50.4
COL.COLO4_30899 Corchorus olitorius HOM05D000458 ORTHO05D000951 2.0e-23 113.2 127 51.2
Peaxi162Scf00314g00922 Petunia axillaris HOM05D000458 ORTHO05D000951 4.5e-23 112.1 129 53.5
Potri.001G037900 Populus trichocarpa HOM05D000458 ORTHO05D000951 1.3e-22 110.5 129 51.2
Zm00001eb257600 Zea mays HOM05D000458 ORTHO05D000951 1.3e-22 110.5 129 45.0
Oeu012868.2 Olea europaea HOM05D000458 ORTHO05D014366 2.2e-22 109.8 128 48.4
ATR0580G139 Amborella trichopoda HOM05D000458 ORTHO05D014366 3.8e-22 109.0 132 48.5
Duzib235G0578 Durio zibethinus HOM05D000458 ORTHO05D000951 3.8e-22 109.0 113 53.1
Gohir.A10G049200 Gossypium hirsutum HOM05D000458 ORTHO05D000951 3.8e-22 109.0 129 48.8
Sopen03g036700 Solanum pennellii HOM05D000458 ORTHO05D000951 4.9e-22 108.6 114 53.5
GSVIVG01016073001 Vitis vinifera HOM05D000458 ORTHO05D014366 6.5e-22 108.2 117 48.7
Solyc03g117790.2 Solanum lycopersicum HOM05D000458 ORTHO05D000951 8.4e-22 107.8 125 50.4
Os02g0791700 Oryza sativa ssp. japonica HOM05D000458 ORTHO05D000951 1.9e-21 106.7 128 46.1
CSS0027576 Camellia sinensis var. sinensis HOM05D000458 ORTHO05D000951 2.5e-21 106.3 130 49.2
Gorai.011G053300 Gossypium raimondii HOM05D000458 ORTHO05D000951 2.5e-21 106.3 129 48.1
PGSC0003DMG402014218 Solanum tuberosum HOM05D000458 ORTHO05D000951 4.2e-21 105.5 114 51.8
DCAR_021378 Daucus carota HOM05D000478 ORTHO05D000345 5.5e-21 105.1 138 48.6
VMungo0331G0511 Vigna mungo HOM05D000458 ORTHO05D000951 5.5e-21 105.1 112 52.7
Actinidia25492 Actinidia chinensis HOM05D000458 ORTHO05D000951 9.3e-21 104.4 128 48.4
Potri.003G186700 Populus trichocarpa HOM05D000458 ORTHO05D000951 2.7e-20 102.8 127 48.0
TWI75G0382 Tripterygium wilfordii HOM05D000458 ORTHO05D000951 4.6e-20 102.1 129 44.2
arahy.Tifrunner.gnm1.ann1.0HP51M Arachis hypogaea HOM05D000458 ORTHO05D000951 6.0e-20 101.7 107 56.1
Nitab4.5_0004194g0010 Nicotiana tabacum HOM05D000458 ORTHO05D000951 6.0e-20 101.7 114 52.6
Sabra03G0136800 Salix brachista HOM05D000458 ORTHO05D000951 1.0e-19 100.9 127 46.5
TWI79G1061 Tripterygium wilfordii HOM05D000458 ORTHO05D000951 1.3e-19 100.5 132 45.5
HPP92_017163 Vanilla planifolia HOM05D000458 ORTHO05D000951 1.8e-19 100.1 127 48.0
arahy.Tifrunner.gnm1.ann1.YP3YKY Arachis hypogaea HOM05D000458 ORTHO05D000951 2.3e-19 99.8 107 55.1
Actinidia36858 Actinidia chinensis HOM05D000458 ORTHO05D000951 3.0e-19 99.4 129 46.5
Sed0012490 Sechium edule HOM05D000458 ORTHO05D000951 3.0e-19 99.4 124 46.8
Nitab4.5_0004553g0020 Nicotiana tabacum HOM05D000458 ORTHO05D000951 3.9e-19 99.0 114 50.9
CAN.G1008.17 Capsicum annuum HOM05D000458 ORTHO05D000951 5.1e-19 98.6 114 52.6
ClCG10G012850 Citrullus lanatus HOM05D000458 ORTHO05D000951 5.1e-19 98.6 134 42.5
THA.LOC104808159 Tarenaya hassleriana HOM05D000458 ORTHO05D000951 5.1e-19 98.6 137 41.6
RcHm_v2.0_Chr2g0131781 Rosa chinensis HOM05D000458 ORTHO05D000951 6.7e-19 98.2 117 52.1
PSO063G4714 Papaver somniferum HOM05D000458 ORTHO05D000951 8.7e-19 97.8 128 44.5
Cpa.g.sc167.18 Carica papaya HOM05D000458 ORTHO05D000951 1.5e-18 97.1 113 51.3
Sc10g0008470 Simmondsia chinensis HOM05D000458 ORTHO05D000951 1.5e-18 97.1 102 51.0
Sed0017073 Sechium edule HOM05D000458 ORTHO05D000951 2.5e-18 96.3 101 50.5
vmacro19083 Vaccinium macrocarpon HOM05D000458 ORTHO05D000951 2.5e-18 96.3 153 42.5
Eucgr.F03991 Eucalyptus grandis HOM05D000458 ORTHO05D000951 4.3e-18 95.5 130 45.4
Aa31LG4G1330 Aethionema arabicum HOM05D000458 ORTHO05D000951 5.7e-18 95.1 116 45.7
MD17G1228700 Malus domestica HOM05D000458 ORTHO05D000951 5.7e-18 95.1 108 52.8
PSO782G4144 Papaver somniferum HOM05D000458 ORTHO05D000951 5.7e-18 95.1 131 45.0
BcaC08g47523 Brassica carinata HOM05D000458 ORTHO05D000951 7.4e-18 94.7 119 43.7
A07p44650 Brassica napus HOM05D000458 ORTHO05D000951 9.6e-18 94.4 118 44.1
C06p53490 Brassica napus HOM05D000458 ORTHO05D000951 9.6e-18 94.4 116 43.1
BraA07t31974Z Brassica rapa HOM05D000458 ORTHO05D000951 9.6e-18 94.4 118 44.1
CARHR073370 Cardamine hirsuta HOM05D000458 ORTHO05D000951 1.3e-17 94.0 115 43.5
C06p29760 Brassica napus HOM05D000458 ORTHO05D000951 1.6e-17 93.6 117 41.9
BolC6t38137H Brassica oleracea HOM05D000458 ORTHO05D000951 1.6e-17 93.6 117 41.9
CsaV3_3G032690 Cucumis sativus L. HOM05D000458 ORTHO05D000951 2.1e-17 93.2 101 48.5
BcaNung04175 Brassica carinata HOM05D000458 ORTHO05D000951 2.8e-17 92.8 118 41.5
Carub.0002s2652 Capsella rubella HOM05D000458 ORTHO05D000951 2.8e-17 92.8 116 41.4
AT1G79640 Arabidopsis thaliana HOM05D000458 ORTHO05D000951 3.7e-17 92.4 115 42.6
BolC6t40364H Brassica oleracea HOM05D000458 ORTHO05D000951 3.7e-17 92.4 116 44.8
Sp5g34710 Schrenkiella parvula HOM05D000458 ORTHO05D000951 3.7e-17 92.4 116 42.2
A07p27030 Brassica napus HOM05D000458 ORTHO05D000951 8.2e-17 91.3 117 41.9
BraA07t30347Z Brassica rapa HOM05D000458 ORTHO05D000951 8.2e-17 91.3 117 41.9
AL2G40330 Arabidopsis lyrata HOM05D000458 ORTHO05D000951 2.4e-16 89.7 116 40.5
BcaB02g07229 Brassica carinata HOM05D000458 ORTHO05D000951 5.3e-16 88.6 119 39.5
Migut.I00637 Erythranthe guttata HOM05D000458 ORTHO05D000951 5.3e-16 88.6 129 44.2
Cc04_g05430 Coffea canephora HOM05D000458 ORTHO05D014366 9.0e-16 87.8 107 46.7
Thhalv10018218m.g Eutrema salsugineum HOM05D000458 ORTHO05D000951 1.2e-15 87.4 119 40.3
Nitab4.5_0004576g0050 Nicotiana tabacum HOM05D000458 ORTHO05D000951 1.2e-15 87.4 125 42.4
Nitab4.5_0010280g0010 Nicotiana tabacum HOM05D000458 ORTHO05D000951 3.4e-15 85.9 112 45.5
HanXRQChr08g0235901 Helianthus annuus HOM05D000458 ORTHO05D000951 8.4e-14 81.3 101 48.5
PGR102G2498 Punica granatum HOM05D000458 ORTHO05D000951 1.1e-13 80.9 116 44.0
ECA246G0758 Erigeron canadensis HOM05D000458 ORTHO05D000951 1.6e-12 77.0 101 44.6
unitig_22.g6278 Utricularia gibba HOM05D000458 ORTHO05D014366 3.5e-12 75.9 126 38.1
CAN.G1503.15 Capsicum annuum HOM05D000458 ORTHO05D000951 6.1e-12 75.1 112 42.0
Zm00001eb192580 Zea mays HOM05D000458 ORTHO05D000951 1.0e-11 74.3 168 30.4
Sopen06g025850 Solanum pennellii HOM05D000458 ORTHO05D000951 2.3e-11 73.2 156 34.0
FvH4_6g28050 Fragaria vesca HOM05D000458 ORTHO05D000951 3.0e-11 72.8 111 45.0
FAN14G3713 Fragaria x ananassa HOM05D000458 ORTHO05D000951 3.0e-11 72.8 111 45.0
AUR62040632 Chenopodium quinoa HOM05D000458 ORTHO05D000951 3.9e-11 72.4 129 39.5
Peaxi162Scf00207g00339 Petunia axillaris HOM05D000458 ORTHO05D000951 8.7e-11 71.2 139 35.3
Aa31LG7G740 Aethionema arabicum HOM05D000458 ORTHO05D000951 2.5e-10 69.7 116 38.8
THA.LOC104813596 Tarenaya hassleriana HOM05D000458 ORTHO05D000951 4.3e-10 68.9 124 38.7
HanXRQChr02g0033731 Helianthus annuus HOM05D000458 ORTHO05D000951 9.7e-10 67.8 92 44.6
SGA_v2.0_scaffold5G02833 Striga asiatica HOM05D000458 ORTHO05D000951 1.6e-09 67.0 93 41.9
Lsat_1_v5_gn_5_9141 Lactuca sativa HOM05D000458 ORTHO05D000951 2.8e-09 66.2 101 41.6
ECA247G2745 Erigeron canadensis HOM05D000458 ORTHO05D000951 3.7e-09 65.9 101 40.6
CANSAT64G1211 Cannabis sativa HOM05D000458 ORTHO05D000951 4.8e-09 65.5 128 35.2
FAN09G1841 Fragaria x ananassa HOM05D000458 ORTHO05D000951 4.8e-09 65.5 96 45.8
CSS0042600 Camellia sinensis var. sinensis HOM05D035626 ORTHO05D014366 6.3e-09 65.1 40 70.0
Rhsim12G0183200 Rhododendron simsii HOM05D000458 ORTHO05D000951 8.2e-09 64.7 129 36.4
CSS0042689 Camellia sinensis var. sinensis HOM05D035626 ORTHO05D014366 1.1e-08 64.3 40 70.0
PSO170G2905 Papaver somniferum HOM05D000458 ORTHO05D000951 1.3e-06 57.4 126 38.9
SEGI_28911 Sequoiadendron giganteum HOM05D000458 ORTHO05D000951 1.3e-06 57.4 124 31.5
SEGI_36226 Sequoiadendron giganteum HOM05D000458 ORTHO05D000951 2.9e-06 56.2 121 32.2
PSO017G5882 Papaver somniferum HOM05D000458 ORTHO05D000951 5.0e-06 55.5 127 39.4


User provided reference genes

Program Settings