Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 4.2e-189 664.5 320 100.0
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 2.8e-68 263.1 319 45.8
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 3.6e-63 246.1 324 41.7
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 5.9e-58 228.8 303 40.9
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 3.8e-57 226.1 309 40.8
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 6.1e-55 218.8 298 38.9
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 8.0e-55 218.4 318 37.1
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.0e-54 218.0 317 39.1
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 1.0e-54 218.0 317 39.1
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 5.7e-53 212.2 317 37.9
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 1.1e-51 208.0 321 36.8
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 1.8e-51 207.2 319 38.6
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 2.0e-50 203.8 312 36.9
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 3.8e-49 199.5 318 36.5
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 8.6e-49 198.4 292 38.0
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 1.5e-48 197.6 299 37.8
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 1.6e-47 194.1 325 37.2
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 8.0e-47 191.8 317 37.9
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 3.0e-46 189.9 299 35.8
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 1.2e-45 188.0 323 36.2
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 2.6e-45 186.8 325 36.0
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 1.3e-44 184.5 319 35.7
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 6.4e-44 182.2 270 35.9
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.1e-43 181.4 323 35.0
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 1.4e-43 181.0 319 34.5
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 5.4e-43 179.1 278 36.3
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 9.2e-43 178.3 314 36.3
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 1.2e-42 177.9 314 36.0
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 2.7e-42 176.8 285 34.4
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 2.7e-42 176.8 278 36.7
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 1.0e-41 174.9 322 34.5
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 1.3e-41 174.5 306 33.3
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 2.3e-41 173.7 322 33.9
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 2.3e-41 173.7 258 37.6
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 1.1e-40 171.4 324 34.0
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 3.3e-40 169.9 300 31.0
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 4.3e-40 169.5 329 31.9
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 1.2e-39 167.9 299 35.8
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 1.2e-39 167.9 299 35.8
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 1.2e-39 167.9 299 35.8
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 1.6e-39 167.5 288 34.0
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 2.1e-39 167.2 318 34.6
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 2.1e-39 167.2 324 33.3
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 8.0e-39 165.2 296 33.8
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 1.1e-38 164.9 321 34.0
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 1.4e-38 164.5 320 33.1
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 1.4e-38 164.5 317 33.1
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 3.1e-38 163.3 278 31.7
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 3.1e-38 163.3 300 33.7
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 4.0e-38 162.9 287 33.1
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 4.0e-38 162.9 286 32.9
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 6.8e-38 162.2 272 34.6
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 6.8e-38 162.2 291 33.7
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.2e-37 161.4 301 33.6
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 7.5e-37 158.7 293 32.4
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 1.3e-36 157.9 299 32.1
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 2.9e-36 156.8 318 33.6
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 8.3e-36 155.2 282 33.3
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 1.4e-35 154.5 319 32.0
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 1.4e-35 154.5 284 32.0
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 1.4e-35 154.5 270 34.1
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 4.1e-35 152.9 276 32.6
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 4.1e-35 152.9 285 29.5
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 2.0e-34 150.6 302 31.1
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 6.0e-34 149.1 330 30.9
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 7.8e-34 148.7 302 30.8
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 7.8e-34 148.7 288 33.0
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.0e-33 148.3 302 30.8
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.7e-33 147.5 302 30.8
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 2.3e-33 147.1 333 30.6
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 3.0e-33 146.7 302 30.8
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 6.6e-33 145.6 324 34.3
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 1.1e-32 144.8 302 31.5
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 1.9e-32 144.1 309 31.4
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.9e-32 144.1 322 29.8
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 5.6e-32 142.5 284 31.7
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 7.3e-32 142.1 329 29.5
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 9.5e-32 141.7 348 32.8
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 1.6e-31 141.0 292 31.8
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 2.8e-31 140.2 319 30.7
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 6.2e-31 139.0 313 29.7
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 1.8e-30 137.5 305 31.5
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 5.2e-30 136.0 121 54.5
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 8.9e-30 135.2 121 54.5
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 2.0e-29 134.0 121 52.9
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 2.0e-29 134.0 121 52.9
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 3.4e-29 133.3 282 30.9
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 5.8e-29 132.5 122 49.2
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 1.3e-28 131.3 264 32.2
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 1.3e-28 131.3 61 100.0
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 8.3e-28 128.6 289 32.2
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 5.4e-27 125.9 128 46.1
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 2.1e-26 124.0 122 52.5
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 6.0e-26 122.5 78 71.8
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 2.1e-23 114.0 78 61.5
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 2.2e-20 104.0 69 65.2
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 4.3e-16 89.7 78 57.7
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 4.0e-14 83.2 198 26.8
MBI17_g26950_MAGBIO Magnolia biondii HOM05D010008 ORTHO05D008946 1.2e-13 81.6 116 46.6
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 2.0e-13 80.9 222 26.1
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 8.4e-12 75.5 108 36.1
MBI14_g38375_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-10 71.6 55 65.5
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 2.3e-09 67.4 148 35.1
Mapoly0061s0086 Marchantia polymorpha HOM05D007171 ORTHO05D008946 1.1e-08 65.1 140 31.4
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 2.8e-07 60.5 149 31.5
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 3.6e-07 60.1 48 50.0


User provided reference genes

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