Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g39232_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.4e-69 266.2 130 100.0
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.9e-47 192.6 136 75.0
DCAR_007389 Daucus carota HOM05D005325 ORTHO05D008457 8.3e-35 150.6 136 58.1
Haze_24265 Corylus avellana HOM05D005325 ORTHO05D008457 1.9e-34 149.4 131 58.0
Cfa011661 Carpinus fangiana HOM05D005325 ORTHO05D008457 3.2e-34 148.7 131 58.0
Nn2g11401 Nelumbo nucifera HOM05D005325 ORTHO05D008457 5.4e-34 147.9 131 57.3
Dinv28619 Davidia involucrata HOM05D005325 ORTHO05D008457 1.7e-32 142.9 133 54.9
CiPaw.13G080600 Carya illinoinensis HOM05D005325 ORTHO05D008457 3.0e-32 142.1 131 53.4
Sc12g0000890 Simmondsia chinensis HOM05D005325 ORTHO05D008457 3.0e-32 142.1 128 57.8
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 3.9e-32 141.7 131 57.3
Hund04885 Selenicereus undatus HOM05D005325 ORTHO05D008457 8.6e-32 140.6 138 55.8
Thecc.09G305000 Theobroma cacao HOM05D005325 ORTHO05D008457 8.6e-32 140.6 131 55.7
PSO384G1123 Papaver somniferum HOM05D005325 ORTHO05D008457 1.5e-31 139.8 127 55.1
Cc01_g13970 Coffea canephora HOM05D005325 ORTHO05D008457 1.9e-31 139.4 130 56.2
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 1.9e-31 139.4 138 52.2
GSVIVG01024786001 Vitis vinifera HOM05D005325 ORTHO05D008457 1.9e-31 139.4 126 56.3
Manes.02G121500 Manihot esculenta HOM05D005325 ORTHO05D008457 2.5e-31 139.0 140 53.6
QL01p037417 Quercus lobata HOM05D005325 ORTHO05D008457 2.5e-31 139.0 131 56.5
Actinidia25148 Actinidia chinensis HOM05D005325 ORTHO05D008457 5.6e-31 137.9 129 53.5
COL.COLO4_19112 Corchorus olitorius HOM05D005325 ORTHO05D008457 2.1e-30 136.0 131 55.7
PSO339G0931 Papaver somniferum HOM05D005325 ORTHO05D008457 2.1e-30 136.0 127 54.3
RcHm_v2.0_Chr5g0068731 Rosa chinensis HOM05D005325 ORTHO05D008457 2.1e-30 136.0 127 55.1
Eucgr.J01937 Eucalyptus grandis HOM05D005325 ORTHO05D008457 4.7e-30 134.8 135 51.1
Prupe.6G060500 Prunus persica HOM05D005325 ORTHO05D008457 4.7e-30 134.8 127 53.5
Sed0000838 Sechium edule HOM05D005325 ORTHO05D008457 6.2e-30 134.4 133 52.6
CAN.G700.24 Capsicum annuum HOM05D005325 ORTHO05D008457 8.1e-30 134.0 130 53.1
Thhalv10017013m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 8.1e-30 134.0 132 54.5
Oeu019913.1 Olea europaea HOM05D005325 ORTHO05D008457 8.1e-30 134.0 131 53.4
TWI31G1198 Tripterygium wilfordii HOM05D005325 ORTHO05D008457 8.1e-30 134.0 131 51.9
Potri.001G249400 Populus trichocarpa HOM05D005325 ORTHO05D008457 1.1e-29 133.7 131 54.2
Carub.0004s1073 Capsella rubella HOM05D005325 ORTHO05D008457 1.4e-29 133.3 126 52.4
Sp4g12350 Schrenkiella parvula HOM05D005325 ORTHO05D008457 1.4e-29 133.3 127 55.1
CARHR122960 Cardamine hirsuta HOM05D005325 ORTHO05D008457 1.8e-29 132.9 127 55.1
Gohir.D05G090700 Gossypium hirsutum HOM05D005325 ORTHO05D008457 2.3e-29 132.5 137 52.6
Solyc09g031770.3 Solanum lycopersicum HOM05D005325 ORTHO05D008457 4.0e-29 131.7 131 51.9
vmacro02986 Vaccinium macrocarpon HOM05D005325 ORTHO05D008457 4.0e-29 131.7 126 53.2
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 5.2e-29 131.3 131 51.9
MELO3C025867.2 Cucumis melo HOM05D005325 ORTHO05D008457 5.2e-29 131.3 133 51.9
Gorai.009G093200 Gossypium raimondii HOM05D005325 ORTHO05D008457 5.2e-29 131.3 137 51.8
MD11G1079900 Malus domestica HOM05D005325 ORTHO05D008457 8.9e-29 130.6 128 53.1
Sabra16G0151500 Salix brachista HOM05D005325 ORTHO05D008457 8.9e-29 130.6 131 51.9
Sopen09g014710 Solanum pennellii HOM05D005325 ORTHO05D008457 8.9e-29 130.6 131 51.9
Aa31LG5G6860 Aethionema arabicum HOM05D005325 ORTHO05D008457 1.2e-28 130.2 127 53.5
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 1.2e-28 130.2 127 54.3
Glyma.02G225500 Glycine max HOM05D005325 ORTHO05D008457 1.2e-28 130.2 131 50.4
Gohir.A05G089800 Gossypium hirsutum HOM05D005325 ORTHO05D008457 1.2e-28 130.2 137 52.6
PGSC0003DMG400020866 Solanum tuberosum HOM05D005325 ORTHO05D008457 1.2e-28 130.2 136 50.7
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 1.5e-28 129.8 135 51.1
FAN21G2059 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.5e-28 129.8 127 52.8
AL4G24390 Arabidopsis lyrata HOM05D005325 ORTHO05D008457 2.0e-28 129.4 127 53.5
MSTRG.18491 Avicennia marina HOM05D005325 ORTHO05D008457 2.0e-28 129.4 132 53.0
FvH4_3g38250 Fragaria vesca HOM05D005325 ORTHO05D008457 2.0e-28 129.4 127 52.0
FAN11G0298 Fragaria x ananassa HOM05D005325 ORTHO05D008457 2.0e-28 129.4 127 52.0
C04p21170 Brassica napus HOM05D005325 ORTHO05D008457 2.6e-28 129.0 130 53.1
CsaV3_6G016370 Cucumis sativus L. HOM05D005325 ORTHO05D008457 2.6e-28 129.0 133 51.9
BcaC02g11048 Brassica carinata HOM05D005325 ORTHO05D008457 3.4e-28 128.6 130 52.3
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 3.4e-28 128.6 141 48.9
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 3.4e-28 128.6 141 48.9
Duzib170G0996 Durio zibethinus HOM05D005325 ORTHO05D008457 4.4e-28 128.3 133 51.9
FAN25G2817 Fragaria x ananassa HOM05D005325 ORTHO05D008457 4.4e-28 128.3 127 52.8
BolC4t23643H Brassica oleracea HOM05D005325 ORTHO05D008457 5.8e-28 127.9 129 53.5
Rhsim13G0071900 Rhododendron simsii HOM05D005325 ORTHO05D008457 5.8e-28 127.9 136 49.3
Ah.08g220810 Amaranthus hybridus HOM05D005325 ORTHO05D008457 7.5e-28 127.5 127 52.8
Os03g0265200 Oryza sativa ssp. japonica HOM05D005325 ORTHO05D008457 7.5e-28 127.5 126 50.8
PGR119G0476 Punica granatum HOM05D005325 ORTHO05D008457 9.9e-28 127.1 131 51.9
Zm00001eb011730 Zea mays HOM05D005325 ORTHO05D008457 1.3e-27 126.7 127 52.0
BcaB02g10271 Brassica carinata HOM05D005325 ORTHO05D008457 1.7e-27 126.3 128 50.8
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 1.7e-27 126.3 127 53.5
CDE10G0077 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 2.2e-27 125.9 111 59.5
AUR62020101 Chenopodium quinoa HOM05D005325 ORTHO05D008457 2.2e-27 125.9 138 50.0
Ca_05587_v3 Cicer arietinum L. HOM05D005325 ORTHO05D008457 2.2e-27 125.9 133 50.4
HPP92_015197 Vanilla planifolia HOM05D005325 ORTHO05D008457 2.2e-27 125.9 131 51.1
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 2.9e-27 125.6 128 50.8
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 2.9e-27 125.6 131 48.1
AUR62001679 Chenopodium quinoa HOM05D005325 ORTHO05D008457 3.7e-27 125.2 138 49.3
Aqoxy4G02653 Aquilegia oxysepala HOM05D005325 ORTHO05D008457 4.9e-27 124.8 136 50.7
Migut.D00728 Erythranthe guttata HOM05D005325 ORTHO05D008457 4.9e-27 124.8 130 51.5
Medtr5g069880 Medicago truncatula HOM05D005325 ORTHO05D008457 4.9e-27 124.8 133 50.4
SGA_v2.0_scaffold8G04497 Striga asiatica HOM05D005325 ORTHO05D008457 4.9e-27 124.8 133 51.1
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 6.4e-27 124.4 134 50.0
Lsat_1_v5_gn_5_172281 Lactuca sativa HOM05D005325 ORTHO05D008457 6.4e-27 124.4 131 49.6
BcaB06g28320 Brassica carinata HOM05D005325 ORTHO05D008457 8.3e-27 124.0 127 51.2
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 1.1e-26 123.6 128 50.0
LjContig00155g0003403 Lotus japonicus HOM05D005325 ORTHO05D008457 1.1e-26 123.6 127 48.8
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 2.4e-26 122.5 133 49.6
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 4.1e-26 121.7 127 52.0
Psat2g059320 Pisum sativum HOM05D005325 ORTHO05D008457 4.1e-26 121.7 128 50.8
TPR.G24020 Trifolium pratense HOM05D005325 ORTHO05D008457 4.1e-26 121.7 130 50.8
Lalb_Chr04g0252301 Lupinus albus HOM05D005325 ORTHO05D008457 7.1e-26 120.9 132 49.2
BolC4t27390H Brassica oleracea HOM05D005325 ORTHO05D008457 9.2e-26 120.6 127 51.2
CANSAT54G0458 Cannabis sativa HOM05D005325 ORTHO05D008457 1.2e-25 120.2 128 49.2
BraA04t17802Z Brassica rapa HOM05D005325 ORTHO05D008457 2.1e-25 119.4 127 50.4
Peaxi162Scf00116g00163 Petunia axillaris HOM05D005325 ORTHO05D008457 2.1e-25 119.4 133 50.4
SHI11316 Sapria himalayana HOM05D005325 ORTHO05D008457 2.1e-25 119.4 140 45.0
TAR633G2421 Trochodendron aralioides HOM05D005325 ORTHO05D008457 1.3e-24 116.7 106 52.8
EL10Ac7g16130 Beta vulgaris HOM05D005325 ORTHO05D008457 1.7e-24 116.3 135 45.9
VMungo0647G2564 Vigna mungo HOM05D005325 ORTHO05D008457 1.7e-24 116.3 131 48.1
Phvul.008G262400 Phaseolus vulgaris HOM05D005325 ORTHO05D008457 8.6e-24 114.0 127 48.0
TAR636G1969 Trochodendron aralioides HOM05D005325 ORTHO05D008457 3.3e-23 112.1 103 54.4
BcaC02g08075 Brassica carinata HOM05D005325 ORTHO05D008457 7.3e-23 110.9 128 49.2
Lj1P141T46 Lonicera japonica HOM05D005325 ORTHO05D008457 1.2e-22 110.2 106 50.9
unitig_62.g23862 Utricularia gibba HOM05D005325 ORTHO05D008457 8.1e-22 107.5 132 43.9
unitig_64.g29774 Utricularia gibba HOM05D005325 ORTHO05D008457 8.1e-22 107.5 132 43.9
AagrBONN_evm.TU.Sc2ySwM_362.267 Anthoceros agrestis HOM05D005325 ORTHO05D008457 4.0e-21 105.1 129 45.0
Mapoly0026s0005 Marchantia polymorpha HOM05D005325 ORTHO05D008457 2.0e-20 102.8 127 44.1
Nitab4.5_0006983g0030 Nicotiana tabacum HOM05D005325 ORTHO05D008457 9.9e-20 100.5 103 51.5
Duzib168G2216 Durio zibethinus HOM05D005325 ORTHO05D008457 2.2e-19 99.4 130 43.8
FAN16G2295 Fragaria x ananassa HOM05D005325 ORTHO05D008457 4.9e-19 98.2 103 47.6
SMO351G0628 Selaginella moellendorffii HOM05D005325 ORTHO05D008457 1.9e-18 96.3 117 46.2
AagrBONN_evm.TU.Sc2ySwM_362.272 Anthoceros agrestis HOM05D005325 ORTHO05D008457 7.1e-18 94.4 132 40.2
Pp3c13_16720 Physcomitrium patens HOM05D005325 ORTHO05D008457 6.0e-17 91.3 132 38.6
Thhalv10017876m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 9.6e-15 84.0 95 44.2
Atru.chr3.4243 Acer truncatum HOM05D005325 ORTHO05D008457 9.0e-13 77.4 58 65.5
C04p58710 Brassica napus HOM05D005325 ORTHO05D008457 1.6e-09 66.6 81 43.2
Lsat_1_v5_gn_9_104180 Lactuca sativa HOM05D005325 ORTHO05D024237 6.0e-09 64.7 83 43.4
Haze_27525 Corylus avellana HOM05D005325 ORTHO05D008457 1.7e-08 63.2 83 47.0
Cre03.g146707 Chlamydomonas reinhardtii HOM05D005325 ORTHO05D008457 3.6e-06 55.5 78 42.3
ClCG06G015800 Citrullus lanatus HOM05D005325 ORTHO05D008457 6.2e-06 54.7 62 45.2


User provided reference genes

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