Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g38620_MAGBIO Magnolia biondii HOM05D006004 ORTHO05D006976 6.3e-31 136.7 66 100.0
TAR622G0980 Trochodendron aralioides HOM05D006004 ORTHO05D006976 1.9e-19 98.6 52 84.6
Hma1.2p1_0340F.1_g130130 Hydrangea macrophylla HOM05D006004 ORTHO05D006976 4.2e-19 97.4 52 82.7
Hund02533 Selenicereus undatus HOM05D006004 ORTHO05D006976 4.2e-19 97.4 52 82.7
Manes.01G022600 Manihot esculenta HOM05D006004 ORTHO05D006976 7.2e-19 96.7 52 80.8
Dinv38608 Davidia involucrata HOM05D006004 ORTHO05D006976 9.5e-19 96.3 52 80.8
Migut.D01490 Erythranthe guttata HOM05D006004 ORTHO05D006976 1.2e-18 95.9 52 80.8
Lj9A434T79 Lonicera japonica HOM05D006004 ORTHO05D006976 1.6e-18 95.5 52 80.8
Manes.05G116700 Manihot esculenta HOM05D006004 ORTHO05D006976 1.6e-18 95.5 52 84.6
CANSAT80G2410 Cannabis sativa HOM05D006004 ORTHO05D006976 2.8e-18 94.7 52 80.8
Dinv36862 Davidia involucrata HOM05D006004 ORTHO05D006976 2.8e-18 94.7 52 78.8
AUR62032166 Chenopodium quinoa HOM05D006004 ORTHO05D006976 3.6e-18 94.4 52 80.8
Nitab4.5_0000646g0210 Nicotiana tabacum HOM05D006004 ORTHO05D006976 3.6e-18 94.4 52 78.8
Nitab4.5_0004342g0050 Nicotiana tabacum HOM05D006004 ORTHO05D006976 3.6e-18 94.4 52 78.8
TWI81G0634 Tripterygium wilfordii HOM05D006004 ORTHO05D006976 3.6e-18 94.4 52 82.7
Lalb_Chr07g0178481 Lupinus albus HOM05D006004 ORTHO05D006976 4.7e-18 94.0 52 82.7
Eucgr.K02642 Eucalyptus grandis HOM05D006004 ORTHO05D006976 6.1e-18 93.6 52 80.8
Lalb_Chr13g0302541 Lupinus albus HOM05D006004 ORTHO05D006976 6.1e-18 93.6 52 80.8
Rhsim12G0145700 Rhododendron simsii HOM05D006004 ORTHO05D006976 6.1e-18 93.6 52 76.9
MD14G1219000 Malus domestica HOM05D006004 ORTHO05D006976 8.0e-18 93.2 51 82.4
QL10p022090 Quercus lobata HOM05D006004 ORTHO05D006976 8.0e-18 93.2 52 76.9
EL10Ac5g11222 Beta vulgaris HOM05D006004 ORTHO05D006976 1.0e-17 92.8 52 80.8
Sc04g0003860 Simmondsia chinensis HOM05D006004 ORTHO05D006976 1.0e-17 92.8 52 80.8
AUR62036924 Chenopodium quinoa HOM05D006004 ORTHO05D006976 1.4e-17 92.4 52 78.8
Haze_18564 Corylus avellana HOM05D006004 ORTHO05D006976 1.4e-17 92.4 52 76.9
Lsat_1_v5_gn_4_111701 Lactuca sativa HOM05D006004 ORTHO05D006976 1.4e-17 92.4 52 76.9
Medtr4g112530 Medicago truncatula HOM05D006004 ORTHO05D006976 1.4e-17 92.4 52 80.8
Oeu031928.2 Olea europaea HOM05D006004 ORTHO05D006976 1.4e-17 92.4 52 76.9
RcHm_v2.0_Chr7g0184231 Rosa chinensis HOM05D006004 ORTHO05D006976 1.4e-17 92.4 51 82.4
ECA232G0726 Erigeron canadensis HOM05D006004 ORTHO05D006976 1.8e-17 92.0 52 76.9
Lj4g0027030 Lotus japonicus HOM05D006004 ORTHO05D006976 1.8e-17 92.0 53 77.4
Peaxi162Scf00017g03030 Petunia axillaris HOM05D006004 ORTHO05D006976 1.8e-17 92.0 52 76.9
unitig_8.g3285 Utricularia gibba HOM05D000076 ORTHO05D006976 1.8e-17 92.0 52 76.9
HPP92_019401 Vanilla planifolia HOM05D006004 ORTHO05D006976 1.8e-17 92.0 51 74.5
Ah.06g192750 Amaranthus hybridus HOM05D006004 ORTHO05D006976 2.3e-17 91.7 52 78.8
BcaC09g49695 Brassica carinata HOM05D006004 ORTHO05D006976 2.3e-17 91.7 52 78.8
BcaNung02628 Brassica carinata HOM05D006004 ORTHO05D006976 2.3e-17 91.7 52 78.8
A03p46450 Brassica napus HOM05D006004 ORTHO05D006976 2.3e-17 91.7 52 78.8
C01p33840 Brassica napus HOM05D006004 ORTHO05D006976 2.3e-17 91.7 52 78.8
C07p44490 Brassica napus HOM05D006004 ORTHO05D006976 2.3e-17 91.7 52 78.8
BolC1t03349H Brassica oleracea HOM05D006004 ORTHO05D006976 2.3e-17 91.7 52 78.8
BolC7t44968H Brassica oleracea HOM05D006004 ORTHO05D006976 2.3e-17 91.7 52 78.8
BraA03t13771Z Brassica rapa HOM05D006004 ORTHO05D006976 2.3e-17 91.7 52 78.8
FAN13G2114 Fragaria x ananassa HOM05D006004 ORTHO05D006976 2.3e-17 91.7 51 80.4
Aa31LG11G2560 Aethionema arabicum HOM05D006004 ORTHO05D006976 3.0e-17 91.3 52 76.9
Thhalv10004373m.g Eutrema salsugineum HOM05D006004 ORTHO05D006976 3.0e-17 91.3 52 78.8
FAN08G1008 Fragaria x ananassa HOM05D006004 ORTHO05D006976 3.0e-17 91.3 51 80.4
TPR.G2782 Trifolium pratense HOM05D006004 ORTHO05D006976 3.0e-17 91.3 52 78.8
Actinidia18955 Actinidia chinensis HOM05D006004 ORTHO05D006976 4.0e-17 90.9 52 75.0
COL.COLO4_32170 Corchorus olitorius HOM05D006004 ORTHO05D006976 4.0e-17 90.9 52 75.0
DCAR_015123 Daucus carota HOM05D006004 ORTHO05D006976 4.0e-17 90.9 52 78.8
Sp2g24060 Schrenkiella parvula HOM05D006004 ORTHO05D006976 4.0e-17 90.9 52 76.9
Solyc03g114450.3 Solanum lycopersicum HOM05D006004 ORTHO05D006976 4.0e-17 90.9 52 73.1
Sopen03g033550 Solanum pennellii HOM05D006004 ORTHO05D006976 4.0e-17 90.9 52 73.1
ATR0752G115 Amborella trichopoda HOM05D006004 ORTHO05D006976 5.2e-17 90.5 53 71.7
BcaC06g33190 Brassica carinata HOM05D006004 ORTHO05D006976 5.2e-17 90.5 52 76.9
Cc04_g07800 Coffea canephora HOM05D006004 ORTHO05D006976 5.2e-17 90.5 52 76.9
FvH4_5g12950 Fragaria vesca HOM05D006004 ORTHO05D006976 5.2e-17 90.5 51 80.4
FAN18G2003 Fragaria x ananassa HOM05D006004 ORTHO05D006976 5.2e-17 90.5 51 80.4
FAN18G3302 Fragaria x ananassa HOM05D006004 ORTHO05D006976 5.2e-17 90.5 51 80.4
Prupe.5G213600 Prunus persica HOM05D006004 ORTHO05D006976 5.2e-17 90.5 51 78.4
Duzib068G1132 Durio zibethinus HOM05D006004 ORTHO05D006976 6.8e-17 90.1 51 76.5
Sabra15G0076000 Salix brachista HOM05D006004 ORTHO05D006976 6.8e-17 90.1 52 76.9
SalBow1G1782 Salvia bowleyana HOM05D006004 ORTHO05D006976 6.8e-17 90.1 52 78.8
Carub.0006s2084 Capsella rubella HOM05D006004 ORTHO05D006976 8.9e-17 89.7 52 78.8
PSO782G5175 Papaver somniferum HOM05D006004 ORTHO05D006976 8.9e-17 89.7 52 78.8
PGSC0003DMG400024508 Solanum tuberosum HOM05D006004 ORTHO05D006976 8.9e-17 89.7 51 74.5
CDE02G3844 Ceratophyllum demersum HOM05D006004 ORTHO05D006976 1.2e-16 89.4 52 76.9
PSO063G5123 Papaver somniferum HOM05D006004 ORTHO05D006976 1.2e-16 89.4 52 78.8
Actinidia35066 Actinidia chinensis HOM05D006004 ORTHO05D006976 1.5e-16 89.0 52 73.1
Ca_21732_v3 Cicer arietinum L. HOM05D006004 ORTHO05D006976 1.5e-16 89.0 52 75.0
HanXRQChr16g0502021 Helianthus annuus HOM05D006004 ORTHO05D006976 1.5e-16 89.0 52 73.1
PGR044G2256 Punica granatum HOM05D006004 ORTHO05D006976 1.5e-16 89.0 52 75.0
CiPaw.15G122500 Carya illinoinensis HOM05D006004 ORTHO05D006976 2.0e-16 88.6 52 73.1
Psat4g044640 Pisum sativum HOM05D006004 ORTHO05D006976 2.0e-16 88.6 52 78.8
AL6G34230 Arabidopsis lyrata HOM05D006004 ORTHO05D006976 2.6e-16 88.2 52 76.9
Glyma.05G016000 Glycine max HOM05D006004 ORTHO05D006976 2.6e-16 88.2 53 73.6
Glyma.17G084300 Glycine max HOM05D006004 ORTHO05D006976 2.6e-16 88.2 53 73.6
THA.LOC104800943 Tarenaya hassleriana HOM05D006004 ORTHO05D006976 3.4e-16 87.8 52 73.1
Aqoxy3G03831 Aquilegia oxysepala HOM05D006004 ORTHO05D006976 4.4e-16 87.4 53 77.4
MSTRG.9575 Avicennia marina HOM05D006004 ORTHO05D006976 4.4e-16 87.4 52 71.2
AT5G23060 Arabidopsis thaliana HOM05D006004 ORTHO05D006976 5.7e-16 87.0 52 75.0
arahy.Tifrunner.gnm1.ann1.4WKV82 Arachis hypogaea HOM05D006004 ORTHO05D006976 5.7e-16 87.0 52 76.9
arahy.Tifrunner.gnm1.ann1.N2LMFJ Arachis hypogaea HOM05D006004 ORTHO05D006976 5.7e-16 87.0 52 76.9
GSVIVG01008201001 Vitis vinifera HOM05D006004 ORTHO05D006976 5.7e-16 87.0 52 73.1
MD06G1208600 Malus domestica HOM05D006004 ORTHO05D006976 7.5e-16 86.7 51 76.5
Os02g0729400 Oryza sativa ssp. japonica HOM05D006004 ORTHO05D006976 7.5e-16 86.7 52 71.2
CAN.G982.4 Capsicum annuum HOM05D006004 ORTHO05D006976 9.8e-16 86.3 52 71.2
CDE01G0597 Ceratophyllum demersum HOM05D006004 ORTHO05D006976 9.8e-16 86.3 52 75.0
Gohir.A07G057100 Gossypium hirsutum HOM05D006004 ORTHO05D006976 9.8e-16 86.3 52 71.2
Gorai.001G065100 Gossypium raimondii HOM05D006004 ORTHO05D006976 1.3e-15 85.9 52 69.2
VMungo1215G0559 Vigna mungo HOM05D006004 ORTHO05D006976 1.3e-15 85.9 53 73.6
CARHR190470 Cardamine hirsuta HOM05D006004 ORTHO05D006976 2.2e-15 85.1 52 73.1
Phvul.003G180100 Phaseolus vulgaris HOM05D006004 ORTHO05D006976 2.2e-15 85.1 53 71.7
Gohir.D07G061400 Gossypium hirsutum HOM05D006004 ORTHO05D006976 3.7e-15 84.3 52 67.3
Potri.015G052200 Populus trichocarpa HOM05D006004 ORTHO05D006976 8.3e-15 83.2 52 71.2
SEGI_01456 Sequoiadendron giganteum HOM05D006004 ORTHO05D006976 1.1e-14 82.8 53 66.0
TAR374G1242 Trochodendron aralioides HOM05D006004 ORTHO05D006976 1.4e-14 82.4 52 69.2
MELO3C002063.2 Cucumis melo HOM05D006004 ORTHO05D006976 1.8e-14 82.0 52 67.3
CsaV3_1G006370 Cucumis sativus L. HOM05D006004 ORTHO05D006976 1.8e-14 82.0 52 67.3
Sed0014753 Sechium edule HOM05D006004 ORTHO05D006976 2.4e-14 81.6 52 67.3
ClCG04G011410 Citrullus lanatus HOM05D006004 ORTHO05D006976 3.1e-14 81.3 52 67.3
Thecc.03G091900 Theobroma cacao HOM05D006004 ORTHO05D006976 4.1e-14 80.9 52 69.2
Thecc.03G114100 Theobroma cacao HOM05D006004 ORTHO05D006976 4.1e-14 80.9 52 69.2
AagrBONN_evm.TU.Sc2ySwM_340.20 Anthoceros agrestis HOM05D006004 ORTHO05D006976 1.2e-13 79.3 53 62.3
Mapoly0104s0007 Marchantia polymorpha HOM05D006004 ORTHO05D006976 1.6e-13 79.0 54 66.7
Pp3c14_1540 Physcomitrium patens HOM05D006004 ORTHO05D006976 2.7e-13 78.2 53 60.4
SMO147G0273 Selaginella moellendorffii HOM05D006004 ORTHO05D006976 1.0e-12 76.3 53 60.4
Pp3c3_8190 Physcomitrium patens HOM05D006004 ORTHO05D006976 7.3e-11 70.1 54 51.9
Atru.chr9.693 Acer truncatum HOM05D006004 ORTHO05D006976 1.6e-10 68.9 35 82.9
Pp3c2_19400 Physcomitrium patens HOM05D006004 ORTHO05D006976 2.1e-10 68.6 53 64.2
Aqoxy3G00419 Aquilegia oxysepala HOM05D006004 ORTHO05D006976 3.1e-09 64.7 56 53.6
CBR_g8983 Chara braunii HOM05D006004 ORTHO05D006976 1.2e-08 62.8 62 45.2


User provided reference genes

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