Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 1.7e-81 306.2 183 100.0
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 4.6e-31 138.7 171 55.6
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 7.9e-31 137.9 172 53.5
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 1.6e-28 130.2 172 51.2
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 3.4e-26 122.5 171 56.7
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 7.6e-26 121.3 177 42.9
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 1.1e-24 117.5 169 40.8
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 3.2e-24 115.9 169 43.8
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 1.6e-23 113.6 177 41.8
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 2.7e-23 112.8 179 36.9
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 3.5e-23 112.5 179 45.3
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 2.3e-22 109.8 175 50.3
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 3.0e-22 109.4 177 42.9
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 5.1e-22 108.6 179 35.2
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 5.1e-22 108.6 182 38.5
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 5.1e-22 108.6 175 49.1
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 6.7e-22 108.2 174 37.4
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 1.1e-21 107.5 177 37.3
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.5e-21 107.1 173 51.4
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 1.5e-21 107.1 162 54.9
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 1.5e-21 107.1 173 40.5
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 1.9e-21 106.7 174 36.8
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 1.9e-21 106.7 176 37.5
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 3.3e-21 105.9 167 49.1
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 4.3e-21 105.5 179 36.9
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 7.4e-21 104.8 187 51.3
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 7.4e-21 104.8 171 39.8
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 1.3e-20 104.0 185 51.4
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 1.3e-20 104.0 180 36.7
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 2.1e-20 103.2 175 40.0
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 2.8e-20 102.8 177 42.9
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 4.8e-20 102.1 170 41.2
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 1.4e-19 100.5 177 41.2
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 1.4e-19 100.5 162 39.5
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 3.1e-19 99.4 174 39.1
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 3.1e-19 99.4 171 45.0
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 3.1e-19 99.4 168 33.9
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 3.1e-19 99.4 186 51.6
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 3.1e-19 99.4 178 37.6
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 3.1e-19 99.4 186 36.0
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 5.3e-19 98.6 178 38.2
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 6.9e-19 98.2 188 36.7
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 6.9e-19 98.2 121 44.6
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 9.0e-19 97.8 181 45.3
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 9.0e-19 97.8 168 35.1
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 1.2e-18 97.4 180 37.2
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 1.5e-18 97.1 187 36.9
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 2.0e-18 96.7 189 34.9
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.0e-18 96.7 177 40.7
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 2.6e-18 96.3 187 33.2
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 2.6e-18 96.3 174 35.6
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 2.6e-18 96.3 177 36.7
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 3.4e-18 95.9 180 46.7
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 3.4e-18 95.9 186 34.4
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 3.4e-18 95.9 167 38.3
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 4.5e-18 95.5 177 38.4
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 4.5e-18 95.5 175 35.4
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 4.5e-18 95.5 167 38.3
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 5.8e-18 95.1 176 43.8
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 5.8e-18 95.1 177 40.1
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 5.8e-18 95.1 168 34.5
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 5.8e-18 95.1 121 43.8
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 7.6e-18 94.7 174 37.9
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 1.0e-17 94.4 175 49.7
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.0e-17 94.4 175 34.9
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 1.3e-17 94.0 179 50.3
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 2.2e-17 93.2 182 34.1
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 4.9e-17 92.0 175 32.6
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 4.9e-17 92.0 178 39.3
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 4.9e-17 92.0 178 39.3
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 6.5e-17 91.7 178 39.3
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 1.4e-16 90.5 165 40.0
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 1.4e-16 90.5 169 36.7
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 1.4e-16 90.5 171 36.8
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 1.9e-16 90.1 179 35.8
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 2.5e-16 89.7 172 33.7
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 2.5e-16 89.7 121 40.5
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 3.2e-16 89.4 168 47.6
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 3.2e-16 89.4 183 38.3
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 4.2e-16 89.0 166 39.2
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 4.2e-16 89.0 172 36.0
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 7.1e-16 88.2 175 36.0
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 7.1e-16 88.2 177 43.5
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 7.1e-16 88.2 181 43.6
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 9.3e-16 87.8 182 48.4
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 1.2e-15 87.4 178 42.7
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.2e-15 87.4 168 35.1
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 1.6e-15 87.0 176 36.4
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 1.6e-15 87.0 207 41.1
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 1.6e-15 87.0 162 34.6
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 2.1e-15 86.7 170 33.5
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 2.1e-15 86.7 178 33.7
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 2.1e-15 86.7 184 50.5
MBI07_g39476_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 7.9e-15 84.7 65 69.2
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 7.9e-15 84.7 156 32.1
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 1.0e-14 84.3 174 36.2
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 1.0e-14 84.3 204 43.6
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 1.3e-14 84.0 201 37.8
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 1.3e-14 84.0 170 32.4
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.3e-14 84.0 180 30.0
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 1.8e-14 83.6 183 32.8
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 2.3e-14 83.2 177 35.0
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 2.3e-14 83.2 172 41.9
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 2.3e-14 83.2 168 33.9
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 6.7e-14 81.6 176 33.5
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 8.7e-14 81.3 182 29.7
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 1.1e-13 80.9 173 33.5
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 1.1e-13 80.9 173 33.5
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 1.1e-13 80.9 181 47.0
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 1.1e-13 80.9 158 32.9
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 1.5e-13 80.5 172 33.7
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 5.7e-13 78.6 185 29.2
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 5.7e-13 78.6 182 33.5
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 5.7e-13 78.6 171 45.6
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 1.3e-12 77.4 176 31.8
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 8.2e-12 74.7 176 31.2
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 1.1e-11 74.3 176 30.7
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 5.3e-11 72.0 67 55.2
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 5.3e-11 72.0 171 43.9
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 3.4e-10 69.3 171 28.7
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 3.4e-10 69.3 171 28.7
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 1.0e-09 67.8 175 32.6
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.0e-09 67.8 123 35.8
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 5.0e-09 65.5 95 42.1
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.1e-08 64.3 50 60.0
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 1.2e-07 60.8 52 57.7
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 4.6e-07 58.9 156 28.8
Gohir.D05G130900 Gossypium hirsutum HOM05D005478 ORTHO05D006426 7.9e-07 58.2 48 54.2
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 5.1e-06 55.5 147 27.9


User provided reference genes

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