Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g36715_MAGBIO Magnolia biondii HOM05D000332 ORTHO05D008535 1.2e-71 273.1 138 100.0
TAR629G1295 Trochodendron aralioides HOM05D000332 ORTHO05D008535 1.9e-16 89.7 126 42.9
Nn3g18896 Nelumbo nucifera HOM05D000332 ORTHO05D008535 1.0e-14 84.0 124 41.9
DCAR_006534 Daucus carota HOM05D000332 ORTHO05D008535 3.9e-14 82.0 119 42.0
Aqoxy1G02690 Aquilegia oxysepala HOM05D000332 ORTHO05D008535 1.1e-13 80.5 124 41.9
CSS0037084 Camellia sinensis var. sinensis HOM05D000332 ORTHO05D008535 1.5e-13 80.1 104 47.1
CSS0039348 Camellia sinensis var. sinensis HOM05D000332 ORTHO05D008535 1.5e-13 80.1 104 47.1
Ciclev10022384m.g Citrus clementina HOM05D000332 ORTHO05D008535 1.9e-13 79.7 126 42.1
Hma1.2p1_0440F.1_g153740 Hydrangea macrophylla HOM05D000332 ORTHO05D008535 1.9e-13 79.7 127 44.9
Actinidia22153 Actinidia chinensis HOM05D000332 ORTHO05D008535 3.3e-13 79.0 116 41.4
CSS0010091 Camellia sinensis var. sinensis HOM05D000332 ORTHO05D008535 3.3e-13 79.0 131 41.2
TWI60G1526 Tripterygium wilfordii HOM05D000332 ORTHO05D008535 3.3e-13 79.0 138 39.9
MBI12_g03924_MAGBIO Magnolia biondii HOM05D000332 ORTHO05D008535 1.6e-12 76.6 37 94.6
Eucgr.E01034 Eucalyptus grandis HOM05D000332 ORTHO05D008535 2.1e-12 76.3 109 42.2
RcHm_v2.0_Chr7g0186761 Rosa chinensis HOM05D000332 ORTHO05D008535 2.1e-12 76.3 126 41.3
PGR042G2558 Punica granatum HOM05D000332 ORTHO05D008535 2.8e-12 75.9 129 41.9
Lj2A158T80 Lonicera japonica HOM05D000332 ORTHO05D008535 3.6e-12 75.5 125 37.6
Oeu010741.1 Olea europaea HOM05D000332 ORTHO05D008535 3.6e-12 75.5 117 44.4
Glyma.20G067400 Glycine max HOM05D000332 ORTHO05D008535 4.7e-12 75.1 126 38.9
Glyma.20G217100 Glycine max HOM05D000332 ORTHO05D008535 4.7e-12 75.1 105 41.0
Cpa.g.sc1337.2 Carica papaya HOM05D000332 ORTHO05D008535 8.1e-12 74.3 99 45.5
Manes.01G051900 Manihot esculenta HOM05D000332 ORTHO05D008535 8.1e-12 74.3 123 38.2
Solyc08g066740.3 Solanum lycopersicum HOM05D000332 ORTHO05D008535 8.1e-12 74.3 127 40.2
Sopen08g020710 Solanum pennellii HOM05D000332 ORTHO05D008535 8.1e-12 74.3 127 40.2
ATR0810G088 Amborella trichopoda HOM05D000332 ORTHO05D008535 1.1e-11 73.9 108 41.7
Thhalv10023709m.g Eutrema salsugineum HOM05D000332 ORTHO05D008535 1.1e-11 73.9 127 37.0
Phvul.L005501 Phaseolus vulgaris HOM05D000332 ORTHO05D008535 1.1e-11 73.9 105 41.0
Phvul.006G000066 Phaseolus vulgaris HOM05D000332 ORTHO05D008535 1.4e-11 73.6 128 38.3
Aa31LG2G1670 Aethionema arabicum HOM05D000332 ORTHO05D008535 1.8e-11 73.2 124 35.5
CANSAT21G0585 Cannabis sativa HOM05D000332 ORTHO05D008535 1.8e-11 73.2 123 33.3
MD14G1124500 Malus domestica HOM05D000332 ORTHO05D008535 1.8e-11 73.2 100 42.0
Thecc.03G222700 Theobroma cacao HOM05D000332 ORTHO05D008535 1.8e-11 73.2 124 41.1
CiPaw.12G078500 Carya illinoinensis HOM05D000332 ORTHO05D008535 2.3e-11 72.8 103 40.8
CDE12G0677 Ceratophyllum demersum HOM05D001628 ORTHO05D001568 2.3e-11 72.8 111 44.1
MD06G1117200 Malus domestica HOM05D000332 ORTHO05D008535 2.3e-11 72.8 100 42.0
Peaxi162Scf00161g00119 Petunia axillaris HOM05D000332 ORTHO05D008535 2.3e-11 72.8 127 39.4
VMungo0540G1621 Vigna mungo HOM05D000332 ORTHO05D008535 2.3e-11 72.8 107 39.3
Gohir.D03G086600 Gossypium hirsutum HOM05D000332 ORTHO05D008535 3.1e-11 72.4 124 39.5
Medtr1g077790 Medicago truncatula HOM05D000332 ORTHO05D008535 3.1e-11 72.4 127 37.0
Sabra01G0061700 Salix brachista HOM05D000332 ORTHO05D008535 3.1e-11 72.4 129 38.8
Glyma.10G173100 Glycine max HOM05D000332 ORTHO05D008535 4.0e-11 72.0 120 39.2
PSO063G5902 Papaver somniferum HOM05D000332 ORTHO05D008535 4.0e-11 72.0 121 37.2
Prupe.5G128300 Prunus persica HOM05D000332 ORTHO05D008535 4.0e-11 72.0 126 38.9
COL.COLO4_10781 Corchorus olitorius HOM05D000332 ORTHO05D008535 5.2e-11 71.6 126 38.9
Duzib205G1575 Durio zibethinus HOM05D000332 ORTHO05D008535 5.2e-11 71.6 123 39.0
PGSC0003DMG400004317 Solanum tuberosum HOM05D000332 ORTHO05D008535 5.2e-11 71.6 127 38.6
TPR.G34815 Trifolium pratense HOM05D000332 ORTHO05D008535 5.2e-11 71.6 109 38.5
BcaB07g31485 Brassica carinata HOM05D000332 ORTHO05D008535 6.8e-11 71.2 124 36.3
QL02p029143 Quercus lobata HOM05D000332 ORTHO05D008535 6.8e-11 71.2 126 37.3
FAN04G3261 Fragaria x ananassa HOM05D000332 ORTHO05D008535 8.9e-11 70.9 127 40.9
FAN08G0785 Fragaria x ananassa HOM05D000332 ORTHO05D008535 8.9e-11 70.9 127 40.9
Potri.001G085100 Populus trichocarpa HOM05D000332 ORTHO05D008535 8.9e-11 70.9 129 37.2
Psat6g053440 Pisum sativum HOM05D000332 ORTHO05D008535 1.2e-10 70.5 126 36.5
BcaB07g31491 Brassica carinata HOM05D000332 ORTHO05D008535 1.5e-10 70.1 124 35.5
CAN.G335.6 Capsicum annuum HOM05D000332 ORTHO05D008535 1.5e-10 70.1 127 36.2
Haze_09150 Corylus avellana HOM05D000332 ORTHO05D008535 1.5e-10 70.1 99 41.4
FAN13G2365 Fragaria x ananassa HOM05D002361 ORTHO05D002843 1.5e-10 70.1 129 40.3
Gohir.A02G097700 Gossypium hirsutum HOM05D000332 ORTHO05D008535 1.5e-10 70.1 124 37.9
CDE04G3467 Ceratophyllum demersum HOM05D000332 ORTHO05D008535 2.0e-10 69.7 125 40.0
Gorai.003G075500 Gossypium raimondii HOM05D000332 ORTHO05D008535 2.0e-10 69.7 133 39.8
Lsat_1_v5_gn_6_82280 Lactuca sativa HOM05D000332 ORTHO05D008535 2.6e-10 69.3 126 38.9
THA.LOC104823624 Tarenaya hassleriana HOM05D000332 ORTHO05D008535 2.6e-10 69.3 119 42.0
AUR62007040 Chenopodium quinoa HOM05D000332 ORTHO05D008535 3.4e-10 68.9 104 40.4
ClCG10G000850 Citrullus lanatus HOM05D000332 ORTHO05D008535 3.4e-10 68.9 101 39.6
Sp2g00070 Schrenkiella parvula HOM05D000332 ORTHO05D008535 4.4e-10 68.6 124 35.5
Glyma.13G002000 Glycine max HOM05D000332 ORTHO05D008535 5.8e-10 68.2 131 36.6
PSO782G5682 Papaver somniferum HOM05D000332 ORTHO05D008535 5.8e-10 68.2 121 36.4
CARHR046280 Cardamine hirsuta HOM05D000332 ORTHO05D008535 7.5e-10 67.8 122 37.7
AUR62019904 Chenopodium quinoa HOM05D000332 ORTHO05D008535 7.5e-10 67.8 104 40.4
Carub.0002s0009 Capsella rubella HOM05D000332 ORTHO05D008535 9.8e-10 67.4 125 36.8
Sed0023764 Sechium edule HOM05D000332 ORTHO05D008535 9.8e-10 67.4 110 40.0
Ah.12g053110 Amaranthus hybridus HOM05D000332 ORTHO05D008535 1.3e-09 67.0 126 38.1
SalBow8G3886 Salvia bowleyana HOM05D000332 ORTHO05D008535 1.3e-09 67.0 122 39.3
Hund14198 Selenicereus undatus HOM05D000332 ORTHO05D008535 1.3e-09 67.0 125 38.4
MSTRG.13721 Avicennia marina HOM05D000332 ORTHO05D008535 1.7e-09 66.6 130 39.2
Lj5g0005295 Lotus japonicus HOM05D000332 ORTHO05D008535 1.7e-09 66.6 132 36.4
Dinv12008 Davidia involucrata HOM05D000332 ORTHO05D008535 2.2e-09 66.2 108 37.0
FvH4_5g11040 Fragaria vesca HOM05D000332 ORTHO05D008535 2.9e-09 65.9 127 38.6
FAN18G0974 Fragaria x ananassa HOM05D000332 ORTHO05D008535 2.9e-09 65.9 127 38.6
HanXRQChr03g0086111 Helianthus annuus HOM05D000332 ORTHO05D008535 2.9e-09 65.9 125 36.8
Manes.02G003900 Manihot esculenta HOM05D000332 ORTHO05D008535 2.9e-09 65.9 123 35.8
Nitab4.5_0000151g0350 Nicotiana tabacum HOM05D000332 ORTHO05D008535 2.9e-09 65.9 130 37.7
ECA240G0944 Erigeron canadensis HOM05D000757 ORTHO05D008535 3.7e-09 65.5 115 39.1
GSVIVG01019636001 Vitis vinifera HOM05D000332 ORTHO05D008535 3.7e-09 65.5 116 39.7
Atru.chr9.1908 Acer truncatum HOM05D000332 ORTHO05D008535 4.9e-09 65.1 99 40.4
Sc07g0010190 Simmondsia chinensis HOM05D000332 ORTHO05D008535 4.9e-09 65.1 103 35.9
VMungo0720G1757 Vigna mungo HOM05D000332 ORTHO05D008535 4.9e-09 65.1 127 37.8
A09p14460 Brassica napus HOM05D000332 ORTHO05D008535 8.3e-09 64.3 125 33.6
BraA09t37097Z Brassica rapa HOM05D000332 ORTHO05D008535 8.3e-09 64.3 125 33.6
AL2G10110 Arabidopsis lyrata HOM05D000332 ORTHO05D008535 1.1e-08 63.9 126 36.5
Nitab4.5_0000837g0090 Nicotiana tabacum HOM05D000332 ORTHO05D008535 1.1e-08 63.9 129 37.2
A09p14490 Brassica napus HOM05D000332 ORTHO05D008535 1.4e-08 63.5 125 32.8
CiPaw.11G113800 Carya illinoinensis HOM05D000332 ORTHO05D008535 1.4e-08 63.5 99 38.4
Cc08_g16650 Coffea canephora HOM05D000332 ORTHO05D008535 1.4e-08 63.5 99 40.4
Migut.E00636 Erythranthe guttata HOM05D000332 ORTHO05D008535 1.9e-08 63.2 99 42.4
AT1G64640 Arabidopsis thaliana HOM05D000332 ORTHO05D008535 2.4e-08 62.8 126 35.7
EL10Ac5g12454 Beta vulgaris HOM05D000332 ORTHO05D008535 2.4e-08 62.8 105 40.0
arahy.Tifrunner.gnm1.ann1.CQ14AB Arachis hypogaea HOM05D000332 ORTHO05D008535 7.1e-08 61.2 130 31.5
arahy.Tifrunner.gnm1.ann1.KV74NT Arachis hypogaea HOM05D000332 ORTHO05D008535 7.1e-08 61.2 130 31.5
C09p17440 Brassica napus HOM05D000332 ORTHO05D008535 9.2e-08 60.8 37 70.3
BcaC04g22601 Brassica carinata HOM05D000332 ORTHO05D008535 1.6e-07 60.1 63 46.0
BolC9t54643H Brassica oleracea HOM05D000332 ORTHO05D008535 1.6e-07 60.1 63 46.0
BcaC04g22596 Brassica carinata HOM05D000332 ORTHO05D008535 2.1e-07 59.7 63 46.0
C09p17480 Brassica napus HOM05D000332 ORTHO05D008535 2.1e-07 59.7 63 46.0
BraA09t37094Z Brassica rapa HOM05D000332 ORTHO05D008535 2.7e-07 59.3 82 40.2
Duzib084G0850 Durio zibethinus HOM05D000332 ORTHO05D008535 2.7e-07 59.3 107 36.4
Os03g0115000 Oryza sativa ssp. japonica HOM05D000332 ORTHO05D008535 2.7e-07 59.3 37 67.6
HPP92_003261 Vanilla planifolia HOM05D000332 ORTHO05D008535 2.7e-07 59.3 37 67.6
unitig_0.g2236 Utricularia gibba HOM05D000332 ORTHO05D008535 7.8e-07 57.8 121 33.1
BolC9t54646H Brassica oleracea HOM05D000332 ORTHO05D008535 1.3e-06 57.0 62 43.5
Lalb_Chr02g0149631 Lupinus albus HOM05D000332 ORTHO05D008535 5.1e-06 55.1 125 33.6


User provided reference genes

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