Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g35409_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 8.4e-296 1019.6 517 100.0
MBI14_g36922_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 7.8e-201 704.1 444 86.9
GSVIVG01000649001 Vitis vinifera HOM05D003450 ORTHO05D004150 8.2e-142 508.1 443 63.7
Nn2g10559 Nelumbo nucifera HOM05D003450 ORTHO05D004150 1.2e-137 494.2 449 61.9
QL02p074015 Quercus lobata HOM05D003450 ORTHO05D004150 5.1e-136 488.8 444 60.8
Haze_14757 Corylus avellana HOM05D003450 ORTHO05D004150 9.7e-135 484.6 444 59.9
Cfa007340 Carpinus fangiana HOM05D003450 ORTHO05D004150 1.7e-134 483.8 444 59.7
Dinv37611 Davidia involucrata HOM05D003450 ORTHO05D004150 2.6e-132 476.5 444 59.5
Hma1.2p1_1136F.1_g260470 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 2.6e-132 476.5 444 59.9
Aqoxy6G00591 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 2.1e-129 466.8 445 61.1
QL03p035003 Quercus lobata HOM05D003450 ORTHO05D004150 4.7e-129 465.7 444 59.0
CSS0002385 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 3.9e-128 462.6 444 57.9
Potri.001G343500 Populus trichocarpa HOM05D003450 ORTHO05D004150 3.9e-128 462.6 444 59.2
Sabra16G0222800 Salix brachista HOM05D003450 ORTHO05D004150 5.7e-127 458.8 444 59.0
CiPaw.09G022500 Carya illinoinensis HOM05D003450 ORTHO05D004150 1.7e-126 457.2 445 59.6
TWI56G0323 Tripterygium wilfordii HOM05D003450 ORTHO05D004150 2.8e-126 456.4 443 57.6
Manes.17G111200 Manihot esculenta HOM05D003450 ORTHO05D004150 6.3e-126 455.3 443 58.0
MD09G1023300 Malus domestica HOM05D003450 ORTHO05D004150 1.4e-125 454.1 444 57.9
Duzib264G1290 Durio zibethinus HOM05D003450 ORTHO05D004150 3.1e-125 453.0 444 57.9
Prupe.3G293600 Prunus persica HOM05D003450 ORTHO05D004150 3.1e-125 453.0 445 58.7
Thecc.04G019300 Theobroma cacao HOM05D003450 ORTHO05D004150 3.1e-125 453.0 444 57.7
Duzib147G0628 Durio zibethinus HOM05D003450 ORTHO05D004150 2.0e-124 450.3 445 57.8
Ciclev10014189m.g Citrus clementina HOM05D003450 ORTHO05D004150 4.5e-124 449.1 445 58.9
Manes.15G151800 Manihot esculenta HOM05D003450 ORTHO05D004150 7.7e-124 448.4 444 57.7
Eucgr.I01732 Eucalyptus grandis HOM05D003450 ORTHO05D004150 6.5e-123 445.3 446 58.3
Gorai.012G065100 Gossypium raimondii HOM05D003450 ORTHO05D004150 1.1e-122 444.5 444 58.3
vmacro11398 Vaccinium macrocarpon HOM05D003450 ORTHO05D004150 1.4e-122 444.1 440 57.5
MD17G1022800 Malus domestica HOM05D003450 ORTHO05D004150 1.9e-122 443.7 444 57.2
RcHm_v2.0_Chr2g0173241 Rosa chinensis HOM05D003450 ORTHO05D004150 1.2e-121 441.0 444 57.0
FAN14G2265 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.7e-121 439.9 444 57.7
Cc08_g15080 Coffea canephora HOM05D003450 ORTHO05D004150 3.6e-121 439.5 441 55.8
FAN09G1073 Fragaria x ananassa HOM05D003450 ORTHO05D004150 3.6e-121 439.5 444 57.4
FAN05G3254 Fragaria x ananassa HOM05D003450 ORTHO05D004150 4.7e-121 439.1 444 57.2
Lj5C248G9 Lonicera japonica HOM05D003450 ORTHO05D004150 4.7e-121 439.1 447 56.4
Gohir.A05G354700 Gossypium hirsutum HOM05D003450 ORTHO05D004150 6.1e-121 438.7 444 58.1
Peaxi162Scf00074g01921 Petunia axillaris HOM05D003450 ORTHO05D004150 6.1e-121 438.7 443 56.0
FAN02G3092 Fragaria x ananassa HOM05D003450 ORTHO05D004150 1.4e-120 437.6 444 57.2
FvH4_6g51710 Fragaria vesca HOM05D003450 ORTHO05D004150 6.7e-120 435.3 444 57.2
ClCG09G019370 Citrullus lanatus HOM05D003450 ORTHO05D004150 7.4e-119 431.8 444 56.3
Oeu059564.1 Olea europaea HOM05D003450 ORTHO05D004150 1.3e-118 431.0 444 55.9
PGR142G3144 Punica granatum HOM05D003450 ORTHO05D004150 1.3e-118 431.0 448 56.7
Oeu042349.1 Olea europaea HOM05D003450 ORTHO05D004150 2.2e-118 430.3 444 56.3
PSO421G0225 Papaver somniferum HOM05D003450 ORTHO05D004150 2.2e-118 430.3 444 56.5
Glyma.19G003200 Glycine max HOM05D003450 ORTHO05D004150 8.2e-118 428.3 445 56.6
PSO063G0895 Papaver somniferum HOM05D003450 ORTHO05D004150 2.4e-117 426.8 444 55.9
arahy.Tifrunner.gnm1.ann1.Q7XHAR Arachis hypogaea HOM05D003450 ORTHO05D004150 3.1e-117 426.4 440 55.9
CANSAT64G2043 Cannabis sativa HOM05D003450 ORTHO05D004150 4.1e-117 426.0 443 56.0
Phvul.004G005200 Phaseolus vulgaris HOM05D003450 ORTHO05D004150 4.1e-117 426.0 448 56.2
Psat1g053760 Pisum sativum HOM05D003450 ORTHO05D004150 5.3e-117 425.6 444 55.4
arahy.Tifrunner.gnm1.ann1.F3BVF1 Arachis hypogaea HOM05D003450 ORTHO05D004150 9.1e-117 424.9 439 56.0
Ca_04147_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 7.7e-116 421.8 444 54.3
Ca_30596_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 7.7e-116 421.8 444 54.3
Nitab4.5_0002282g0060 Nicotiana tabacum HOM05D003450 ORTHO05D004150 1.0e-115 421.4 431 55.0
Lj2g0026665 Lotus japonicus HOM05D003450 ORTHO05D004150 3.8e-115 419.5 444 54.7
Glyma.19G056700 Glycine max HOM05D003450 ORTHO05D004150 8.5e-115 418.3 445 55.3
TPR.G31948 Trifolium pratense HOM05D003450 ORTHO05D004150 1.1e-114 417.9 444 54.5
MELO3C021591.2 Cucumis melo HOM05D003450 ORTHO05D004150 1.5e-114 417.5 444 54.1
Sed0008503 Sechium edule HOM05D003450 ORTHO05D004150 3.2e-114 416.4 441 55.6
CsaV3_5G027040 Cucumis sativus L. HOM05D003450 ORTHO05D004150 4.2e-114 416.0 444 53.8
AUR62034774 Chenopodium quinoa HOM05D003450 ORTHO05D004150 1.6e-113 414.1 447 52.6
Hma1.2p1_1136F.1_g260480 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 1.6e-113 414.1 404 58.2
Lsat_1_v5_gn_3_9121 Lactuca sativa HOM05D003450 ORTHO05D004150 4.7e-113 412.5 430 55.1
Medtr6g004510 Medicago truncatula HOM05D003450 ORTHO05D004150 6.1e-113 412.1 444 54.3
VMungo0464G1019 Vigna mungo HOM05D003450 ORTHO05D004150 6.1e-113 412.1 450 55.1
Nitab4.5_0006540g0050 Nicotiana tabacum HOM05D003450 ORTHO05D004150 8.0e-113 411.8 469 52.0
EL10Ac5g11313 Beta vulgaris HOM05D003450 ORTHO05D004150 1.2e-111 407.9 443 53.3
AUR62009512 Chenopodium quinoa HOM05D003450 ORTHO05D004150 1.2e-111 407.9 439 53.3
Lalb_Chr18g0055341 Lupinus albus HOM05D003450 ORTHO05D004150 4.4e-111 406.0 448 54.9
Sed0014883 Sechium edule HOM05D003450 ORTHO05D004150 7.5e-111 405.2 441 54.0
MBI14_g31103_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 1.3e-110 404.4 442 59.3
MSTRG.11963 Avicennia marina HOM05D003450 ORTHO05D004150 2.8e-110 403.3 445 53.7
Os12g0538900 Oryza sativa ssp. japonica HOM05D003450 ORTHO05D004150 4.5e-108 396.0 439 51.3
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 1.0e-107 394.8 445 53.0
ECA246G5325 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.7e-107 394.0 441 51.7
Lalb_Chr15g0086731 Lupinus albus HOM05D003450 ORTHO05D004150 5.0e-107 392.5 448 52.0
PGSC0003DMG400012328 Solanum tuberosum HOM05D003450 ORTHO05D004150 8.5e-107 391.7 443 52.1
HanXRQChr17g0533281 Helianthus annuus HOM05D003450 ORTHO05D004150 4.2e-106 389.4 447 51.9
Sopen08g029730 Solanum pennellii HOM05D003450 ORTHO05D004150 4.2e-106 389.4 443 51.9
SGA_v2.0_scaffold76G25156 Striga asiatica HOM05D003450 ORTHO05D004150 9.4e-106 388.3 437 51.3
CAN.G532.15 Capsicum annuum HOM05D003450 ORTHO05D004150 1.2e-105 387.9 441 51.7
SalBow8G1100 Salvia bowleyana HOM05D003450 ORTHO05D004150 4.7e-105 386.0 439 51.0
Hund02491 Selenicereus undatus HOM05D003450 ORTHO05D004150 8.0e-105 385.2 446 51.3
ECA233G1844 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.0e-104 384.8 439 50.1
THA.LOC104823952 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 1.8e-104 384.0 440 52.5
Solyc08g081410.3 Solanum lycopersicum HOM05D003450 ORTHO05D004150 5.2e-104 382.5 443 50.8
SalBow8G1997 Salvia bowleyana HOM05D003450 ORTHO05D004150 1.2e-103 381.3 436 50.9
Hund15478 Selenicereus undatus HOM05D003450 ORTHO05D004150 1.5e-103 380.9 440 51.8
Ah.02g116930 Amaranthus hybridus HOM05D003450 ORTHO05D004150 6.3e-102 375.6 444 49.8
Zm00001eb410430 Zea mays HOM05D003450 ORTHO05D004150 1.4e-101 374.4 438 48.4
Zm00001eb137680 Zea mays HOM05D003450 ORTHO05D004150 1.8e-101 374.0 446 49.6
HPP92_017154 Vanilla planifolia HOM05D003450 ORTHO05D004150 3.1e-101 373.2 448 49.8
HPP92_017150 Vanilla planifolia HOM05D003450 ORTHO05D004150 4.1e-101 372.9 452 49.6
THA.LOC104825318 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 5.4e-101 372.5 441 52.2
Aa31LG2G5130 Aethionema arabicum HOM05D003450 ORTHO05D004150 1.9e-98 364.0 452 48.5
BcaC03g17471 Brassica carinata HOM05D003450 ORTHO05D004150 7.2e-98 362.1 447 47.7
Sp2g16700 Schrenkiella parvula HOM05D003450 ORTHO05D004150 9.5e-98 361.7 446 48.4
unitig_61.g26360 Utricularia gibba HOM05D003450 ORTHO05D004150 3.6e-97 359.8 428 49.3
Thhalv10003626m.g Eutrema salsugineum HOM05D003450 ORTHO05D004150 6.1e-97 359.0 448 48.4
AT3G27530 Arabidopsis thaliana HOM05D003450 ORTHO05D004150 8.0e-97 358.6 454 48.0
CSS0024266 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 5.2e-96 355.9 471 48.2
CSS0021042 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 9.8e-95 351.7 439 50.1
CSS0048429 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.7e-94 350.9 439 49.7
BcaC06g30980 Brassica carinata HOM05D003450 ORTHO05D004150 3.7e-94 349.7 448 47.8
BcaC06g33806 Brassica carinata HOM05D003450 ORTHO05D004150 3.7e-94 349.7 448 47.5
C07p36640 Brassica napus HOM05D003450 ORTHO05D004150 3.7e-94 349.7 448 47.8
BolC7t44182H Brassica oleracea HOM05D003450 ORTHO05D004150 3.7e-94 349.7 448 47.5
A06p41100 Brassica napus HOM05D003450 ORTHO05D004150 8.3e-94 348.6 448 47.5
BraA06t27033Z Brassica rapa HOM05D003450 ORTHO05D004150 8.3e-94 348.6 448 47.5
A02p35530 Brassica napus HOM05D003450 ORTHO05D004150 1.4e-93 347.8 448 47.1
BraA02t08553Z Brassica rapa HOM05D003450 ORTHO05D004150 7.0e-93 345.5 448 46.9
C02p54300 Brassica napus HOM05D003450 ORTHO05D004150 2.3e-91 340.5 447 45.9
BolC2t11498H Brassica oleracea HOM05D003450 ORTHO05D004150 3.8e-91 339.7 447 45.9
CSS0016783 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 5.0e-91 339.3 369 53.4
DCAR_004619 Daucus carota HOM05D003450 ORTHO05D004150 6.6e-91 339.0 432 46.1
BcaB07g30154 Brassica carinata HOM05D003450 ORTHO05D004150 4.7e-89 332.8 439 46.9
PSO210G4892 Papaver somniferum HOM05D003450 ORTHO05D004150 2.3e-88 330.5 446 46.2
Carub.0005s0596 Capsella rubella HOM05D003450 ORTHO05D004150 9.8e-87 325.1 445 44.7
TAR623G1303 Trochodendron aralioides HOM05D003450 ORTHO05D004150 1.9e-85 320.9 263 67.3
PSO210G3071 Papaver somniferum HOM05D003450 ORTHO05D004150 5.4e-85 319.3 449 45.2
COL.COLO4_29171 Corchorus olitorius HOM05D003450 ORTHO05D004150 2.0e-84 317.4 303 59.4
AL5G16950 Arabidopsis lyrata HOM05D003450 ORTHO05D004150 4.6e-84 316.2 446 43.7
CARHR148900 Cardamine hirsuta HOM05D003450 ORTHO05D004150 5.6e-82 309.3 447 43.8
Gohir.D04G058450 Gossypium hirsutum HOM05D003450 ORTHO05D004150 8.3e-78 295.4 300 59.7
Migut.E01197 Erythranthe guttata HOM05D003450 ORTHO05D004150 4.7e-73 279.6 278 54.0
CSS0005577 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.3e-70 271.6 434 42.2
Sc07g0005180 Simmondsia chinensis HOM05D003450 ORTHO05D004150 6.2e-65 252.7 265 54.0
AagrBONN_evm.TU.Sc2ySwM_344.991 Anthoceros agrestis HOM05D003450 ORTHO05D004150 2.6e-63 247.3 480 38.3
CDE02G4242 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 3.4e-63 246.9 315 48.9
Lj8A217T73 Lonicera japonica HOM05D003450 ORTHO05D004150 4.2e-61 240.0 257 52.9
Pp3c3_27420 Physcomitrium patens HOM05D003450 ORTHO05D004150 3.0e-59 233.8 445 35.1
CSS0015164 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.2e-57 228.4 263 53.2
Mapoly0097s0078 Marchantia polymorpha HOM05D003450 ORTHO05D004150 2.8e-57 227.3 459 37.0
Solyc02g075610.4 Solanum lycopersicum HOM05D003450 ORTHO05D004150 3.6e-57 226.9 423 37.8
SMO367G1196 Selaginella moellendorffii HOM05D003450 ORTHO05D004150 2.4e-56 224.2 458 34.5
CSS0043437 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 9.3e-53 212.2 239 50.6
TAR623G1393 Trochodendron aralioides HOM05D003450 ORTHO05D004150 3.5e-52 210.3 193 63.7
BcaC03g17544 Brassica carinata HOM05D003450 ORTHO05D004150 7.3e-50 202.6 307 44.0
CAN.G293.1 Capsicum annuum HOM05D003450 ORTHO05D004150 3.8e-46 190.3 193 52.3
CDE09G0158 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 7.9e-44 182.6 193 54.4
RcHm_v2.0_Chr2g0173251 Rosa chinensis HOM05D003450 ORTHO05D004150 3.9e-43 180.3 245 46.1
Hma1.2p1_1172F.1_g263680 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 7.4e-42 176.0 169 57.4
Gohir.D07G231100 Gossypium hirsutum HOM05D003450 ORTHO05D004150 6.2e-41 172.9 185 49.7
CiPaw.03G045400 Carya illinoinensis HOM05D003450 ORTHO05D004150 1.1e-37 162.2 165 55.8
Atru.chr6.2427 Acer truncatum HOM05D003450 ORTHO05D004150 2.7e-36 157.5 178 53.9
Zm00001eb442080 Zea mays HOM05D003450 ORTHO05D004150 6.7e-35 152.9 178 51.7
Zm00001eb420770 Zea mays HOM05D003450 ORTHO05D004150 1.1e-34 152.1 177 52.0
Zm00001eb191840 Zea mays HOM05D003450 ORTHO05D004150 5.3e-32 143.3 169 50.9
Zm00001eb235100 Zea mays HOM05D003450 ORTHO05D004150 5.3e-32 143.3 169 50.3
Zm00001eb190000 Zea mays HOM05D003450 ORTHO05D004150 1.2e-31 142.1 169 50.3
Zm00001eb068810 Zea mays HOM05D003450 ORTHO05D004150 1.5e-31 141.7 169 49.7
Zm00001eb162870 Zea mays HOM05D003450 ORTHO05D004150 2.6e-31 141.0 169 50.3
FAN18G3542 Fragaria x ananassa HOM05D003450 ORTHO05D004150 4.5e-31 140.2 152 55.9
Zm00001eb170860 Zea mays HOM05D003450 ORTHO05D004150 7.6e-31 139.4 169 50.3
BolC2t11571H Brassica oleracea HOM05D003450 ORTHO05D004150 3.2e-29 134.0 217 43.8
Gohir.D04G058400 Gossypium hirsutum HOM05D003450 ORTHO05D004150 3.2e-29 134.0 109 57.8
MCO05G130 Micromonas commoda HOM05D003450 ORTHO05D004150 3.2e-29 134.0 586 26.3
Actinidia28359 Actinidia chinensis HOM05D003450 ORTHO05D004150 2.3e-27 127.9 233 39.5
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 3.3e-26 124.0 95 60.0
Atru.chr6.2426 Acer truncatum HOM05D003450 ORTHO05D004150 7.4e-26 122.9 123 54.5
Sc07g0005170 Simmondsia chinensis HOM05D003450 ORTHO05D004150 7.4e-26 122.9 127 56.7
CSS0010567 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.2e-23 115.5 129 55.0
CDE09G0700 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 9.4e-21 105.9 90 54.4
PRCOL_00005576 Prasinoderma coloniale HOM05D003450 ORTHO05D004150 2.4e-16 91.3 473 26.4
TPR.G33285 Trifolium pratense HOM05D003450 ORTHO05D004150 1.5e-15 88.6 68 61.8
Sopen02g029170 Solanum pennellii HOM05D003450 ORTHO05D004150 3.4e-15 87.4 278 33.1
Aqoxy2G03587 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 2.9e-14 84.3 92 55.4
Zm00001eb367390 Zea mays HOM05D003450 ORTHO05D004150 1.5e-10 72.0 123 40.7
TPR.G33244 Trifolium pratense HOM05D003450 ORTHO05D004150 1.4e-08 65.5 115 41.7
Atru.chr6.2428 Acer truncatum HOM05D003450 ORTHO05D004150 1.3e-06 58.9 77 46.8


User provided reference genes

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