Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g32924_MAGBIO Magnolia biondii HOM05D005457 ORTHO05D006350 3.1e-83 311.6 143 100.0
TAR369G0749 Trochodendron aralioides HOM05D005457 ORTHO05D006350 3.1e-67 258.5 140 82.1
Nn2g11331 Nelumbo nucifera HOM05D005457 ORTHO05D006350 3.4e-66 255.0 140 80.7
TAR623G1178 Trochodendron aralioides HOM05D005457 ORTHO05D006350 4.5e-66 254.6 140 80.7
Gohir.A03G047700 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.0e-65 253.4 141 80.9
Gorai.003G125900 Gossypium raimondii HOM05D005457 ORTHO05D006350 1.0e-65 253.4 141 81.6
Hma1.2p1_0543F.1_g175290 Hydrangea macrophylla HOM05D005457 ORTHO05D006350 1.0e-65 253.4 140 80.7
Sc12g0001060 Simmondsia chinensis HOM05D005457 ORTHO05D006350 1.3e-65 253.1 140 80.7
RcHm_v2.0_Chr5g0067371 Rosa chinensis HOM05D005457 ORTHO05D006350 2.2e-65 252.3 140 80.7
Haze_24232 Corylus avellana HOM05D005457 ORTHO05D006350 2.9e-65 251.9 140 80.0
Gohir.D03G119400 Gossypium hirsutum HOM05D005457 ORTHO05D006350 2.9e-65 251.9 140 80.7
Gorai.003G125700 Gossypium raimondii HOM05D005457 ORTHO05D006350 2.9e-65 251.9 140 80.7
Nn2g13569 Nelumbo nucifera HOM05D005457 ORTHO05D006350 2.9e-65 251.9 140 79.3
PSO170G6745 Papaver somniferum HOM05D005457 ORTHO05D006350 2.9e-65 251.9 140 81.4
PSO782G3368 Papaver somniferum HOM05D005457 ORTHO05D006350 2.9e-65 251.9 140 81.4
SHI05894 Sapria himalayana HOM05D005457 ORTHO05D006350 3.8e-65 251.5 141 78.7
arahy.Tifrunner.gnm1.ann1.L17SH6 Arachis hypogaea HOM05D005457 ORTHO05D006350 5.0e-65 251.1 140 80.0
arahy.Tifrunner.gnm1.ann1.U9UY67 Arachis hypogaea HOM05D005457 ORTHO05D006350 5.0e-65 251.1 140 80.0
Aqoxy1G00759 Aquilegia oxysepala HOM05D005457 ORTHO05D006350 6.5e-65 250.8 140 77.9
Glyma.09G228800 Glycine max HOM05D005457 ORTHO05D006350 6.5e-65 250.8 140 80.0
TPR.G3642 Trifolium pratense HOM05D005457 ORTHO05D006350 6.5e-65 250.8 140 79.3
GSVIVG01024823001 Vitis vinifera HOM05D005457 ORTHO05D006350 6.5e-65 250.8 140 80.7
Ca_19579_v3 Cicer arietinum L. HOM05D005457 ORTHO05D006350 8.5e-65 250.4 140 79.3
MD11G1084500 Malus domestica HOM05D005457 ORTHO05D006350 8.5e-65 250.4 140 80.0
Thecc.09G309000 Theobroma cacao HOM05D005457 ORTHO05D006350 8.5e-65 250.4 140 80.0
Dinv34321 Davidia involucrata HOM05D005457 ORTHO05D006350 1.1e-64 250.0 140 79.3
Phvul.011G009900 Phaseolus vulgaris HOM05D005457 ORTHO05D006350 1.1e-64 250.0 140 79.3
VMungo1127G1417 Vigna mungo HOM05D005457 ORTHO05D006350 1.1e-64 250.0 140 79.3
Gohir.A03G047600 Gossypium hirsutum HOM05D005457 ORTHO05D006350 1.9e-64 249.2 140 80.0
Lalb_Chr01g0000381 Lupinus albus HOM05D005457 ORTHO05D006350 1.9e-64 249.2 140 78.6
Prupe.6G064800 Prunus persica HOM05D005457 ORTHO05D006350 1.9e-64 249.2 140 79.3
CSS0049881 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 2.5e-64 248.8 140 79.3
Dinv17076 Davidia involucrata HOM05D005457 ORTHO05D006350 2.5e-64 248.8 140 78.6
Dinv43020 Davidia involucrata HOM05D005457 ORTHO05D006350 2.5e-64 248.8 140 78.6
Dinv43077 Davidia involucrata HOM05D005457 ORTHO05D006350 2.5e-64 248.8 140 78.6
QL01p028955 Quercus lobata HOM05D005457 ORTHO05D006350 2.5e-64 248.8 140 79.3
ClCG03G001030 Citrullus lanatus HOM05D005457 ORTHO05D006350 3.2e-64 248.4 140 78.6
CsaV3_1G035890 Cucumis sativus L. HOM05D005457 ORTHO05D006350 3.2e-64 248.4 140 78.6
Gohir.D03G119500 Gossypium hirsutum HOM05D005457 ORTHO05D006350 3.2e-64 248.4 140 80.7
Psat7g154880 Pisum sativum HOM05D005457 ORTHO05D006350 3.2e-64 248.4 140 78.6
Lj3g0007084 Lotus japonicus HOM05D005457 ORTHO05D006350 4.2e-64 248.1 140 78.6
COL.COLO4_19073 Corchorus olitorius HOM05D005457 ORTHO05D006350 7.2e-64 247.3 140 78.6
FAN21G0431 Fragaria x ananassa HOM05D005457 ORTHO05D006350 7.2e-64 247.3 140 78.6
vmacro03007 Vaccinium macrocarpon HOM05D005457 ORTHO05D006350 7.2e-64 247.3 140 78.6
CiPaw.13G084000 Carya illinoinensis HOM05D005457 ORTHO05D006350 9.4e-64 246.9 140 78.6
Ciclev10027683m.g Citrus clementina HOM05D005457 ORTHO05D006350 9.4e-64 246.9 140 77.9
Glyma.12G007800 Glycine max HOM05D005457 ORTHO05D006350 9.4e-64 246.9 140 79.3
HanXRQChr08g0237081 Helianthus annuus HOM05D005457 ORTHO05D006350 1.2e-63 246.5 140 78.6
Potri.001G247100 Populus trichocarpa HOM05D005457 ORTHO05D006350 1.2e-63 246.5 140 77.9
ECA247G2917 Erigeron canadensis HOM05D005457 ORTHO05D006350 1.6e-63 246.1 140 77.9
FAN16G3594 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.1e-63 245.7 140 78.6
MD03G1079900 Malus domestica HOM05D005457 ORTHO05D006350 2.1e-63 245.7 140 77.9
FAN25G1264 Fragaria x ananassa HOM05D005457 ORTHO05D006350 2.7e-63 245.4 140 78.6
Lj1C143T9 Lonicera japonica HOM05D005457 ORTHO05D006350 2.7e-63 245.4 140 76.4
Lsat_1_v5_gn_9_25441 Lactuca sativa HOM05D005457 ORTHO05D006350 3.6e-63 245.0 140 78.6
Medtr4g037575 Medicago truncatula HOM05D005457 ORTHO05D006350 3.6e-63 245.0 140 77.9
Sabra09G0028400 Salix brachista HOM05D005457 ORTHO05D006350 6.1e-63 244.2 140 77.9
Sed0019872 Sechium edule HOM05D005457 ORTHO05D006350 1.0e-62 243.4 140 76.4
Cpa.g.sc112.89 Carica papaya HOM05D005457 ORTHO05D006350 1.8e-62 242.7 140 76.4
FvH4_3g37470 Fragaria vesca HOM05D005457 ORTHO05D006350 1.8e-62 242.7 140 77.9
FAN11G1716 Fragaria x ananassa HOM05D005457 ORTHO05D006350 1.8e-62 242.7 140 77.9
Atru.chr3.4038 Acer truncatum HOM05D005457 ORTHO05D006350 3.9e-62 241.5 140 75.0
ATR0618G328 Amborella trichopoda HOM05D005457 ORTHO05D006350 3.9e-62 241.5 140 77.1
Manes.02G123500 Manihot esculenta HOM05D005457 ORTHO05D006350 3.9e-62 241.5 140 76.4
Ah.14g082630 Amaranthus hybridus HOM05D005457 ORTHO05D006350 8.8e-62 240.4 140 75.0
Hund11609 Selenicereus undatus HOM05D005457 ORTHO05D006350 8.8e-62 240.4 140 75.7
HPP92_001490 Vanilla planifolia HOM05D005457 ORTHO05D006350 3.3e-61 238.4 140 74.3
AUR62001711 Chenopodium quinoa HOM05D005457 ORTHO05D006350 1.7e-60 236.1 140 74.3
EL10Ac7g16099 Beta vulgaris HOM05D005457 ORTHO05D006350 3.7e-60 235.0 140 73.6
THA.LOC104799410 Tarenaya hassleriana HOM05D005457 ORTHO05D006350 4.8e-60 234.6 140 72.1
DCAR_027735 Daucus carota HOM05D005457 ORTHO05D006350 8.2e-60 233.8 140 73.6
Lj2C1073G13 Lonicera japonica HOM05D005457 ORTHO05D006350 1.1e-59 233.4 140 74.3
Nitab4.5_0006476g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 1.8e-59 232.6 140 71.4
Nitab4.5_0000752g0010 Nicotiana tabacum HOM05D005457 ORTHO05D006350 2.4e-59 232.3 140 71.4
Peaxi162Scf00433g00116 Petunia axillaris HOM05D005457 ORTHO05D006350 2.4e-59 232.3 140 71.4
Cc00_g21960 Coffea canephora HOM05D005457 ORTHO05D006350 4.1e-59 231.5 140 72.1
Zm00001eb358910 Zea mays HOM05D005457 ORTHO05D006350 1.6e-58 229.6 140 72.9
Zm00001eb159160 Zea mays HOM05D005457 ORTHO05D006350 1.3e-57 226.5 140 71.4
SalBow2G3533 Salvia bowleyana HOM05D005457 ORTHO05D006350 2.2e-57 225.7 140 67.9
CAN.G1002.16 Capsicum annuum HOM05D005457 ORTHO05D006350 8.5e-57 223.8 140 67.9
Sopen09g014590 Solanum pennellii HOM05D005457 ORTHO05D006350 7.2e-56 220.7 140 66.4
Solyc09g031650.3 Solanum lycopersicum HOM05D005457 ORTHO05D006350 9.4e-56 220.3 140 66.4
DCAR_027739 Daucus carota HOM05D005457 ORTHO05D006350 8.0e-55 217.2 140 68.6
SGA_v2.0_scaffold199G41161 Striga asiatica HOM05D005457 ORTHO05D006350 1.4e-54 216.5 141 64.5
DCAR_027737 Daucus carota HOM05D005457 ORTHO05D006350 8.8e-54 213.8 140 67.9
Migut.N00905 Erythranthe guttata HOM05D005457 ORTHO05D006350 1.3e-49 199.9 140 58.6
A03p11920 Brassica napus HOM05D005457 ORTHO05D006350 3.0e-46 188.7 140 60.7
BolC3t13849H Brassica oleracea HOM05D005457 ORTHO05D006350 1.4e-43 179.9 148 58.1
Rhsim13G0075000 Rhododendron simsii HOM05D005457 ORTHO05D006350 3.1e-43 178.7 140 60.7
CDE09G0137 Ceratophyllum demersum HOM05D000076 ORTHO05D001377 2.9e-41 172.2 110 66.4
BcaB08g36300 Brassica carinata HOM05D012589 ORTHO05D006350 6.3e-36 154.5 141 51.1
Actinidia25125 Actinidia chinensis HOM05D005457 ORTHO05D006350 1.2e-34 150.2 92 70.7
Psat5g196760 Pisum sativum HOM05D005457 ORTHO05D002728 4.3e-32 141.7 85 71.8
BcaB01g04624 Brassica carinata HOM05D005457 ORTHO05D006350 2.1e-31 139.4 104 60.6
BraA03t10504Z Brassica rapa HOM05D005457 ORTHO05D006350 3.6e-31 138.7 156 46.2
Oeu002456.1 Olea europaea HOM05D005457 ORTHO05D006350 2.3e-30 136.0 87 67.8
SEGI_21152 Sequoiadendron giganteum HOM05D005457 ORTHO05D006350 2.6e-29 132.5 92 62.0
CSS0043795 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 6.4e-28 127.9 69 79.7
CSS0046602 Camellia sinensis var. sinensis HOM05D005457 ORTHO05D006350 6.4e-28 127.9 69 79.7
Manes.01G166000 Manihot esculenta HOM05D005457 ORTHO05D006350 1.5e-21 106.7 70 70.0
CBR_g29779 Chara braunii HOM05D005457 ORTHO05D006350 1.6e-18 96.7 136 33.8
CBR_g34581 Chara braunii HOM05D005457 ORTHO05D006350 1.0e-17 94.0 131 34.4
CBR_g34582 Chara braunii HOM05D005457 ORTHO05D006350 1.5e-16 90.1 115 36.5
Actinidia08559 Actinidia chinensis HOM05D005457 ORTHO05D006350 5.6e-16 88.2 55 70.9
CBR_g34583 Chara braunii HOM05D005457 ORTHO05D006350 4.7e-15 85.1 114 34.2
CBR_g44392 Chara braunii HOM05D005457 ORTHO05D006350 4.7e-15 85.1 114 35.1
unitig_27.g24807 Utricularia gibba HOM05D005457 ORTHO05D006350 1.3e-12 77.0 62 54.8
Duzib170G0080 Durio zibethinus HOM05D005457 ORTHO05D006350 4.3e-08 62.0 87 43.7
MCO12G435 Micromonas commoda HOM05D005011 ORTHO05D006443 3.1e-06 55.8 129 31.0


User provided reference genes

Program Settings