Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g31103_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 7.3e-237 823.5 429 100.0
MBI14_g36922_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 5.0e-145 518.5 445 71.0
GSVIVG01000649001 Vitis vinifera HOM05D003450 ORTHO05D004150 6.2e-111 405.2 445 55.7
MBI14_g35409_MAGBIO Magnolia biondii HOM05D003450 ORTHO05D004150 8.4e-108 394.8 442 59.3
Nn2g10559 Nelumbo nucifera HOM05D003450 ORTHO05D004150 4.2e-107 392.5 445 55.1
Dinv37611 Davidia involucrata HOM05D003450 ORTHO05D004150 1.5e-104 384.0 446 54.7
QL02p074015 Quercus lobata HOM05D003450 ORTHO05D004150 1.9e-104 383.6 447 53.5
Hma1.2p1_1136F.1_g260470 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 6.2e-103 378.6 446 53.1
Haze_14757 Corylus avellana HOM05D003450 ORTHO05D004150 6.9e-102 375.2 447 51.9
Cfa007340 Carpinus fangiana HOM05D003450 ORTHO05D004150 9.9e-101 371.3 447 51.7
Potri.001G343500 Populus trichocarpa HOM05D003450 ORTHO05D004150 2.2e-100 370.2 447 53.9
QL03p035003 Quercus lobata HOM05D003450 ORTHO05D004150 2.4e-99 366.7 447 52.1
vmacro11398 Vaccinium macrocarpon HOM05D003450 ORTHO05D004150 3.2e-99 366.3 446 52.2
Sabra16G0222800 Salix brachista HOM05D003450 ORTHO05D004150 9.3e-99 364.8 447 53.2
CSS0002385 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 1.6e-98 364.0 447 51.2
Manes.17G111200 Manihot esculenta HOM05D003450 ORTHO05D004150 7.8e-98 361.7 443 51.9
Gorai.012G065100 Gossypium raimondii HOM05D003450 ORTHO05D004150 1.7e-97 360.5 444 52.5
Thecc.04G019300 Theobroma cacao HOM05D003450 ORTHO05D004150 3.0e-97 359.8 449 51.4
Oeu059564.1 Olea europaea HOM05D003450 ORTHO05D004150 3.9e-97 359.4 449 51.2
Ciclev10014189m.g Citrus clementina HOM05D003450 ORTHO05D004150 6.6e-97 358.6 447 52.8
Duzib264G1290 Durio zibethinus HOM05D003450 ORTHO05D004150 6.6e-97 358.6 447 51.0
MD09G1023300 Malus domestica HOM05D003450 ORTHO05D004150 6.6e-97 358.6 444 51.6
Prupe.3G293600 Prunus persica HOM05D003450 ORTHO05D004150 1.5e-96 357.5 447 51.7
Aqoxy6G00591 Aquilegia oxysepala HOM05D003450 ORTHO05D004150 3.3e-96 356.3 446 51.3
Glyma.19G003200 Glycine max HOM05D003450 ORTHO05D004150 3.3e-96 356.3 447 51.5
Gohir.A05G354700 Gossypium hirsutum HOM05D003450 ORTHO05D004150 4.3e-96 355.9 444 52.5
MD17G1022800 Malus domestica HOM05D003450 ORTHO05D004150 5.6e-96 355.5 444 50.9
Cc08_g15080 Coffea canephora HOM05D003450 ORTHO05D004150 7.3e-96 355.1 442 50.5
Lj5C248G9 Lonicera japonica HOM05D003450 ORTHO05D004150 7.3e-96 355.1 450 52.0
Manes.15G151800 Manihot esculenta HOM05D003450 ORTHO05D004150 7.3e-96 355.1 447 52.3
CiPaw.09G022500 Carya illinoinensis HOM05D003450 ORTHO05D004150 8.1e-95 351.7 447 50.6
TWI56G0323 Tripterygium wilfordii HOM05D003450 ORTHO05D004150 4.0e-94 349.4 445 50.6
Oeu042349.1 Olea europaea HOM05D003450 ORTHO05D004150 9.0e-94 348.2 449 51.7
Duzib147G0628 Durio zibethinus HOM05D003450 ORTHO05D004150 1.2e-93 347.8 445 50.8
ClCG09G019370 Citrullus lanatus HOM05D003450 ORTHO05D004150 1.5e-93 347.4 444 49.8
Medtr6g004510 Medicago truncatula HOM05D003450 ORTHO05D004150 2.0e-93 347.1 447 49.7
Phvul.004G005200 Phaseolus vulgaris HOM05D003450 ORTHO05D004150 2.6e-93 346.7 447 49.9
FAN05G3254 Fragaria x ananassa HOM05D003450 ORTHO05D004150 5.8e-93 345.5 445 49.7
PGR142G3144 Punica granatum HOM05D003450 ORTHO05D004150 5.8e-93 345.5 444 51.6
RcHm_v2.0_Chr2g0173241 Rosa chinensis HOM05D003450 ORTHO05D004150 5.8e-93 345.5 447 50.1
arahy.Tifrunner.gnm1.ann1.Q7XHAR Arachis hypogaea HOM05D003450 ORTHO05D004150 1.3e-92 344.4 466 47.6
Eucgr.I01732 Eucalyptus grandis HOM05D003450 ORTHO05D004150 1.3e-92 344.4 446 50.2
FAN09G1073 Fragaria x ananassa HOM05D003450 ORTHO05D004150 1.7e-92 344.0 445 49.7
Ca_04147_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 2.2e-92 343.6 445 48.8
Ca_30596_v3 Cicer arietinum L. HOM05D003450 ORTHO05D004150 2.2e-92 343.6 445 48.8
Peaxi162Scf00074g01921 Petunia axillaris HOM05D003450 ORTHO05D004150 6.4e-92 342.0 448 50.0
TPR.G31948 Trifolium pratense HOM05D003450 ORTHO05D004150 6.4e-92 342.0 445 49.2
CANSAT64G2043 Cannabis sativa HOM05D003450 ORTHO05D004150 1.1e-91 341.3 443 49.9
FvH4_6g51710 Fragaria vesca HOM05D003450 ORTHO05D004150 1.4e-91 340.9 445 49.7
FAN02G3092 Fragaria x ananassa HOM05D003450 ORTHO05D004150 1.4e-91 340.9 445 49.2
arahy.Tifrunner.gnm1.ann1.F3BVF1 Arachis hypogaea HOM05D003450 ORTHO05D004150 1.9e-91 340.5 465 47.3
Lalb_Chr18g0055341 Lupinus albus HOM05D003450 ORTHO05D004150 1.9e-91 340.5 468 48.1
Lj2g0026665 Lotus japonicus HOM05D003450 ORTHO05D004150 4.2e-91 339.3 446 48.9
Psat1g053760 Pisum sativum HOM05D003450 ORTHO05D004150 4.2e-91 339.3 447 48.5
FAN14G2265 Fragaria x ananassa HOM05D003450 ORTHO05D004150 5.4e-91 339.0 445 49.7
MELO3C021591.2 Cucumis melo HOM05D003450 ORTHO05D004150 2.7e-90 336.7 445 48.1
VMungo0464G1019 Vigna mungo HOM05D003450 ORTHO05D004150 6.0e-90 335.5 448 49.3
Sed0014883 Sechium edule HOM05D003450 ORTHO05D004150 1.8e-89 334.0 442 49.1
CsaV3_5G027040 Cucumis sativus L. HOM05D003450 ORTHO05D004150 3.9e-89 332.8 444 47.1
Lalb_Chr15g0086731 Lupinus albus HOM05D003450 ORTHO05D004150 8.7e-89 331.6 469 46.9
Sed0008503 Sechium edule HOM05D003450 ORTHO05D004150 5.6e-88 328.9 440 48.6
MSTRG.11963 Avicennia marina HOM05D003450 ORTHO05D004150 4.8e-87 325.9 447 48.8
Nitab4.5_0002282g0060 Nicotiana tabacum HOM05D003450 ORTHO05D004150 4.0e-86 322.8 432 48.1
PSO421G0225 Papaver somniferum HOM05D003450 ORTHO05D004150 4.0e-86 322.8 451 48.8
AUR62034774 Chenopodium quinoa HOM05D003450 ORTHO05D004150 6.9e-86 322.0 448 46.9
EL10Ac5g11313 Beta vulgaris HOM05D003450 ORTHO05D004150 1.2e-85 321.2 468 46.8
Hma1.2p1_1136F.1_g260480 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 2.0e-85 320.5 406 51.0
Hund02491 Selenicereus undatus HOM05D003450 ORTHO05D004150 2.6e-85 320.1 465 46.9
AUR62009512 Chenopodium quinoa HOM05D003450 ORTHO05D004150 7.6e-85 318.5 435 47.4
Nitab4.5_0006540g0050 Nicotiana tabacum HOM05D003450 ORTHO05D004150 2.2e-84 317.0 470 45.7
Os12g0538900 Oryza sativa ssp. japonica HOM05D003450 ORTHO05D004150 3.8e-84 316.2 443 46.3
Glyma.19G056700 Glycine max HOM05D003450 ORTHO05D004150 4.9e-84 315.8 453 47.5
PSO063G0895 Papaver somniferum HOM05D003450 ORTHO05D004150 1.1e-83 314.7 445 47.9
Hund15478 Selenicereus undatus HOM05D003450 ORTHO05D004150 1.4e-83 314.3 441 46.9
Ah.02g116930 Amaranthus hybridus HOM05D003450 ORTHO05D004150 5.5e-83 312.4 442 46.6
ATR0068G094 Amborella trichopoda HOM05D003450 ORTHO05D004150 7.1e-83 312.0 440 46.6
HPP92_017150 Vanilla planifolia HOM05D003450 ORTHO05D004150 4.6e-82 309.3 450 46.0
HPP92_017154 Vanilla planifolia HOM05D003450 ORTHO05D004150 6.0e-82 308.9 446 46.2
ECA246G5325 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.0e-81 308.1 445 45.6
SGA_v2.0_scaffold76G25156 Striga asiatica HOM05D003450 ORTHO05D004150 2.3e-81 307.0 448 47.1
Lsat_1_v5_gn_3_9121 Lactuca sativa HOM05D003450 ORTHO05D004150 3.9e-81 306.2 435 46.7
CSS0005577 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 6.7e-81 305.4 392 49.7
ECA233G1844 Erigeron canadensis HOM05D003450 ORTHO05D004150 1.5e-80 304.3 452 45.8
HanXRQChr17g0533281 Helianthus annuus HOM05D003450 ORTHO05D004150 7.4e-80 302.0 451 46.3
CSS0021042 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 9.6e-80 301.6 412 49.0
Zm00001eb137680 Zea mays HOM05D003450 ORTHO05D004150 2.8e-79 300.1 445 44.0
PSO210G4892 Papaver somniferum HOM05D003450 ORTHO05D004150 6.2e-79 298.9 424 46.5
Zm00001eb410430 Zea mays HOM05D003450 ORTHO05D004150 3.1e-78 296.6 437 43.2
CSS0048429 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 5.3e-78 295.8 415 48.0
SalBow8G1100 Salvia bowleyana HOM05D003450 ORTHO05D004150 4.5e-77 292.7 440 45.5
THA.LOC104825318 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 5.8e-77 292.4 441 46.7
DCAR_004619 Daucus carota HOM05D003450 ORTHO05D004150 1.0e-76 291.6 430 44.9
PGSC0003DMG400012328 Solanum tuberosum HOM05D003450 ORTHO05D004150 1.0e-76 291.6 448 46.0
Thhalv10003626m.g Eutrema salsugineum HOM05D003450 ORTHO05D004150 3.8e-76 289.7 450 44.2
CSS0024266 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 5.0e-76 289.3 444 45.9
SalBow8G1997 Salvia bowleyana HOM05D003450 ORTHO05D004150 6.5e-76 288.9 437 45.3
Sopen08g029730 Solanum pennellii HOM05D003450 ORTHO05D004150 1.9e-75 287.3 447 45.4
PSO210G3071 Papaver somniferum HOM05D003450 ORTHO05D004150 3.2e-75 286.6 425 45.6
AT3G27530 Arabidopsis thaliana HOM05D003450 ORTHO05D004150 4.2e-75 286.2 447 43.4
THA.LOC104823952 Tarenaya hassleriana HOM05D003450 ORTHO05D004150 4.2e-75 286.2 444 44.8
Sp2g16700 Schrenkiella parvula HOM05D003450 ORTHO05D004150 2.7e-74 283.5 445 42.7
Solyc08g081410.3 Solanum lycopersicum HOM05D003450 ORTHO05D004150 2.7e-74 283.5 447 45.0
Aa31LG2G5130 Aethionema arabicum HOM05D003450 ORTHO05D004150 4.6e-74 282.7 448 41.7
BcaC03g17471 Brassica carinata HOM05D003450 ORTHO05D004150 1.8e-73 280.8 450 42.9
CAN.G532.15 Capsicum annuum HOM05D003450 ORTHO05D004150 2.3e-73 280.4 442 44.6
BcaC06g33806 Brassica carinata HOM05D003450 ORTHO05D004150 7.4e-72 275.4 452 43.1
BolC7t44182H Brassica oleracea HOM05D003450 ORTHO05D004150 7.4e-72 275.4 452 43.1
BcaC06g30980 Brassica carinata HOM05D003450 ORTHO05D004150 1.6e-71 274.2 450 43.1
unitig_61.g26360 Utricularia gibba HOM05D003450 ORTHO05D004150 1.6e-71 274.2 431 43.2
A06p41100 Brassica napus HOM05D003450 ORTHO05D004150 3.7e-71 273.1 452 42.9
C07p36640 Brassica napus HOM05D003450 ORTHO05D004150 3.7e-71 273.1 452 42.9
BraA06t27033Z Brassica rapa HOM05D003450 ORTHO05D004150 3.7e-71 273.1 452 42.9
A02p35530 Brassica napus HOM05D003450 ORTHO05D004150 1.2e-69 268.1 450 42.2
BraA02t08553Z Brassica rapa HOM05D003450 ORTHO05D004150 1.5e-69 267.7 450 42.4
BcaB07g30154 Brassica carinata HOM05D003450 ORTHO05D004150 2.1e-66 257.3 439 42.1
C02p54300 Brassica napus HOM05D003450 ORTHO05D004150 3.9e-65 253.1 450 40.7
BolC2t11498H Brassica oleracea HOM05D003450 ORTHO05D004150 3.9e-65 253.1 450 40.7
AL5G16950 Arabidopsis lyrata HOM05D003450 ORTHO05D004150 1.7e-63 247.7 448 39.5
CSS0016783 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.4e-62 243.8 355 46.5
Carub.0005s0596 Capsella rubella HOM05D003450 ORTHO05D004150 3.4e-61 240.0 447 38.9
COL.COLO4_29171 Corchorus olitorius HOM05D003450 ORTHO05D004150 2.9e-60 236.9 303 51.8
Gohir.D04G058450 Gossypium hirsutum HOM05D003450 ORTHO05D004150 3.2e-59 233.4 278 55.8
CARHR148900 Cardamine hirsuta HOM05D003450 ORTHO05D004150 1.0e-57 228.4 449 38.5
TAR623G1303 Trochodendron aralioides HOM05D003450 ORTHO05D004150 2.4e-54 217.2 264 53.8
TAR623G1393 Trochodendron aralioides HOM05D003450 ORTHO05D004150 1.3e-52 211.5 149 76.5
AagrBONN_evm.TU.Sc2ySwM_344.991 Anthoceros agrestis HOM05D003450 ORTHO05D004150 1.9e-51 207.6 482 35.5
SMO367G1196 Selaginella moellendorffii HOM05D003450 ORTHO05D004150 1.4e-49 201.4 461 35.4
Lj8A217T73 Lonicera japonica HOM05D003450 ORTHO05D004150 2.6e-48 197.2 267 47.9
Mapoly0097s0078 Marchantia polymorpha HOM05D003450 ORTHO05D004150 4.4e-48 196.4 457 34.8
Actinidia28359 Actinidia chinensis HOM05D003450 ORTHO05D004150 6.3e-47 192.6 185 58.4
FAN18G3542 Fragaria x ananassa HOM05D003450 ORTHO05D004150 2.4e-46 190.7 142 71.1
Sc07g0005170 Simmondsia chinensis HOM05D003450 ORTHO05D004150 1.6e-45 188.0 130 76.9
Pp3c3_27420 Physcomitrium patens HOM05D003450 ORTHO05D004150 5.9e-45 186.0 455 34.9
CDE02G4242 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 1.5e-43 181.4 305 44.6
CSS0010567 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.5e-43 180.6 130 74.6
CSS0015164 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.5e-43 180.6 232 51.3
Zm00001eb191840 Zea mays HOM05D003450 ORTHO05D004150 2.7e-42 177.2 176 56.8
Zm00001eb420770 Zea mays HOM05D003450 ORTHO05D004150 6.1e-42 176.0 181 55.2
Zm00001eb442080 Zea mays HOM05D003450 ORTHO05D004150 6.1e-42 176.0 182 54.9
Zm00001eb068810 Zea mays HOM05D003450 ORTHO05D004150 8.0e-42 175.6 176 55.7
Zm00001eb235100 Zea mays HOM05D003450 ORTHO05D004150 8.0e-42 175.6 176 55.7
Zm00001eb162870 Zea mays HOM05D003450 ORTHO05D004150 1.4e-41 174.9 176 56.2
Migut.E01197 Erythranthe guttata HOM05D003450 ORTHO05D004150 1.8e-41 174.5 261 44.8
Zm00001eb190000 Zea mays HOM05D003450 ORTHO05D004150 1.8e-41 174.5 176 55.7
Zm00001eb170860 Zea mays HOM05D003450 ORTHO05D004150 8.8e-41 172.2 176 55.7
Sc07g0005180 Simmondsia chinensis HOM05D003450 ORTHO05D004150 7.0e-38 162.5 266 42.9
Solyc02g075610.4 Solanum lycopersicum HOM05D003450 ORTHO05D004150 1.2e-37 161.8 407 32.4
BcaC03g17544 Brassica carinata HOM05D003450 ORTHO05D004150 1.6e-37 161.4 225 47.6
CAN.G293.1 Capsicum annuum HOM05D003450 ORTHO05D004150 3.0e-33 147.1 191 47.1
Hma1.2p1_1172F.1_g263680 Hydrangea macrophylla HOM05D003450 ORTHO05D004150 1.7e-31 141.4 149 52.3
CiPaw.03G045400 Carya illinoinensis HOM05D003450 ORTHO05D004150 2.2e-31 141.0 200 49.0
CSS0043437 Camellia sinensis var. sinensis HOM05D003450 ORTHO05D004150 2.9e-28 130.6 190 43.7
Gohir.D07G231100 Gossypium hirsutum HOM05D003450 ORTHO05D004150 2.9e-28 130.6 183 42.6
Atru.chr6.2428 Acer truncatum HOM05D003450 ORTHO05D004150 1.9e-27 127.9 83 78.3
RcHm_v2.0_Chr2g0173251 Rosa chinensis HOM05D003450 ORTHO05D004150 8.0e-26 122.5 248 37.1
TPR.G33244 Trifolium pratense HOM05D003450 ORTHO05D004150 4.9e-23 113.2 112 57.1
CDE09G0158 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 6.3e-23 112.8 246 39.4
Zm00001eb367390 Zea mays HOM05D003450 ORTHO05D004150 2.7e-21 107.5 130 49.2
Atru.chr6.2426 Acer truncatum HOM05D003450 ORTHO05D004150 4.6e-21 106.7 125 51.2
BolC2t11571H Brassica oleracea HOM05D003450 ORTHO05D004150 6.8e-17 92.8 194 41.2
MCO05G130 Micromonas commoda HOM05D003450 ORTHO05D004150 1.4e-14 85.1 556 25.2
PRCOL_00005576 Prasinoderma coloniale HOM05D003450 ORTHO05D004150 9.2e-14 82.4 463 26.1
Cpa.g.sc108.76 Carica papaya HOM05D003450 ORTHO05D004150 2.3e-12 77.8 74 51.4
Gohir.D04G058400 Gossypium hirsutum HOM05D003450 ORTHO05D004150 5.0e-12 76.6 97 42.3
CDE09G0700 Ceratophyllum demersum HOM05D003450 ORTHO05D004150 1.9e-11 74.7 75 50.7
TPR.G33285 Trifolium pratense HOM05D003450 ORTHO05D004150 2.5e-11 74.3 92 46.7
CBR_g57070 Chara braunii HOM05D003450 ORTHO05D004150 1.2e-10 72.0 155 35.5


User provided reference genes

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