Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g30697_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.7e-163 579.3 310 100.0
MBI14_g30699_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.7e-84 316.2 302 59.3
TAR626G0702 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.6e-31 141.0 290 35.5
TAR626G1223 Trochodendron aralioides HOM05D004960 ORTHO05D004696 6.6e-30 135.6 307 34.5
TAR383G0876 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.9e-29 134.0 297 35.0
TAR383G0614 Trochodendron aralioides HOM05D004960 ORTHO05D004696 4.3e-29 132.9 297 35.0
TAR383G0345 Trochodendron aralioides HOM05D004960 ORTHO05D004696 5.6e-29 132.5 297 34.7
TAR626G1729 Trochodendron aralioides HOM05D004960 ORTHO05D004696 7.3e-29 132.1 309 33.0
MBI14_g30701_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 9.5e-29 131.7 301 35.5
MBI14_g30695_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.2e-28 131.3 295 35.3
ATR0580G065 Amborella trichopoda HOM05D004960 ORTHO05D004696 1.6e-28 131.0 294 32.3
MBI14_g30696_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 6.2e-28 129.0 306 33.7
MBI14_g30694_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 1.6e-23 114.4 294 31.0
Nn8g40270 Nelumbo nucifera HOM05D004960 ORTHO05D004696 1.0e-22 111.7 309 29.8
ATR0580G174 Amborella trichopoda HOM05D004960 ORTHO05D004696 1.7e-22 110.9 298 30.2
MBI14_g30692_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 2.3e-22 110.5 294 31.3
Nn2g12577 Nelumbo nucifera HOM05D004960 ORTHO05D004696 5.1e-22 109.4 301 32.9
TAR625G0177 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.2e-20 104.8 306 30.1
Potri.010G250300 Populus trichocarpa HOM05D004960 ORTHO05D004696 1.6e-20 104.4 296 28.0
Eucgr.C00202 Eucalyptus grandis HOM05D004960 ORTHO05D004696 2.4e-19 100.5 278 30.2
Prupe.1G095900 Prunus persica HOM05D004960 ORTHO05D004696 1.5e-18 97.8 295 30.8
QL02p095902 Quercus lobata HOM05D004960 ORTHO05D004696 4.4e-18 96.3 299 31.1
Cc06_g13870 Coffea canephora HOM05D004960 ORTHO05D004696 5.8e-18 95.9 300 28.0
Hma1.2p1_0921F.1_g236760 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 4.9e-17 92.8 290 25.5
Hma1.2p1_0921F.1_g236792 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 4.9e-17 92.8 290 25.5
Prupe.1G095700 Prunus persica HOM05D004960 ORTHO05D004696 4.9e-17 92.8 286 29.4
Manes.13G066000 Manihot esculenta HOM05D004960 ORTHO05D004696 1.9e-16 90.9 308 27.9
Thecc.09G162700 Theobroma cacao HOM05D004960 ORTHO05D004696 1.9e-16 90.9 285 30.2
COL.COLO4_16060 Corchorus olitorius HOM05D004960 ORTHO05D004696 2.4e-16 90.5 285 30.5
Actinidia38795 Actinidia chinensis HOM05D004960 ORTHO05D004696 5.4e-16 89.4 304 27.6
RcHm_v2.0_Chr4g0404711 Rosa chinensis HOM05D004960 ORTHO05D004696 2.1e-15 87.4 322 28.9
Atru.chr7.532 Acer truncatum HOM05D004960 ORTHO05D004696 3.5e-15 86.7 292 27.1
Ciclev10008947m.g Citrus clementina HOM05D004960 ORTHO05D004696 4.6e-15 86.3 296 28.4
TAR626G1419 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.0e-14 85.1 313 28.4
Manes.14G147200 Manihot esculenta HOM05D004960 ORTHO05D004696 3.0e-14 83.6 310 28.7
Ciclev10008957m.g Citrus clementina HOM05D004960 ORTHO05D004696 3.9e-14 83.2 295 27.8
Cfa013540 Carpinus fangiana HOM05D004960 ORTHO05D004696 1.1e-13 81.6 286 27.3
Hma1.2p1_0921F.1_g236770 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 1.1e-13 81.6 276 28.3
Hma1.2p1_0921F.1_g236794 Hydrangea macrophylla HOM05D004960 ORTHO05D004696 1.1e-13 81.6 276 28.3
CSS0019658 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 1.5e-13 81.3 292 26.7
Eucgr.J03153 Eucalyptus grandis HOM05D004960 ORTHO05D004696 1.9e-13 80.9 295 25.4
Lsat_1_v5_gn_8_65701 Lactuca sativa HOM05D004960 ORTHO05D004696 1.9e-13 80.9 286 28.7
TAR626G1398 Trochodendron aralioides HOM05D004960 ORTHO05D004696 1.9e-13 80.9 223 29.6
MD16G1263500 Malus domestica HOM05D004960 ORTHO05D004696 3.3e-13 80.1 290 28.3
Solyc07g006420.1 Solanum lycopersicum HOM05D004960 ORTHO05D004696 3.3e-13 80.1 300 26.3
TWI63G1126 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 5.6e-13 79.3 289 27.0
CSS0022952 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 7.3e-13 79.0 290 27.2
Haze_10109 Corylus avellana HOM05D004960 ORTHO05D004696 7.3e-13 79.0 286 26.9
RcHm_v2.0_Chr4g0404721 Rosa chinensis HOM05D004960 ORTHO05D004696 7.3e-13 79.0 295 27.5
CSS0038346 Camellia sinensis var. sinensis HOM05D012567 ORTHO05D004696 9.6e-13 78.6 290 27.2
CSS0049948 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 1.3e-12 78.2 304 28.0
Oeu024903.1 Olea europaea HOM05D004960 ORTHO05D004696 2.1e-12 77.4 292 26.0
Dinv41298 Davidia involucrata HOM05D004960 ORTHO05D004696 4.8e-12 76.3 108 37.0
CSS0018327 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 6.2e-12 75.9 304 27.3
Aqoxy7G03208 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 8.1e-12 75.5 283 26.1
BraA04t16256Z Brassica rapa HOM05D004960 ORTHO05D004696 8.1e-12 75.5 294 27.9
Carub.0003s3296 Capsella rubella HOM05D004960 ORTHO05D004696 8.1e-12 75.5 303 29.7
Dinv41299 Davidia involucrata HOM05D004960 ORTHO05D004696 1.1e-11 75.1 290 26.6
Aqoxy7G03205 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 3.1e-11 73.6 297 26.9
Oeu037992.1 Olea europaea HOM05D004960 ORTHO05D004696 3.1e-11 73.6 296 27.7
Nn1g04315 Nelumbo nucifera HOM05D004960 ORTHO05D004696 4.0e-11 73.2 195 33.8
BcaB03g16662 Brassica carinata HOM05D004960 ORTHO05D004696 5.3e-11 72.8 289 27.3
BolC9t54315H Brassica oleracea HOM05D004960 ORTHO05D004696 9.0e-11 72.0 299 27.1
CARHR109270 Cardamine hirsuta HOM05D004960 ORTHO05D004696 9.0e-11 72.0 293 27.6
BcaC04g22889 Brassica carinata HOM05D004960 ORTHO05D004696 1.2e-10 71.6 295 26.8
C09p14170 Brassica napus HOM05D004960 ORTHO05D004696 1.2e-10 71.6 295 26.8
HanXRQChr06g0167601 Helianthus annuus HOM05D012567 ORTHO05D004696 1.5e-10 71.2 308 27.3
Thhalv10022778m.g Eutrema salsugineum HOM05D004960 ORTHO05D004696 2.0e-10 70.9 299 27.8
BcaB07g31648 Brassica carinata HOM05D004960 ORTHO05D004696 3.4e-10 70.1 295 27.8
A04p05570 Brassica napus HOM05D004960 ORTHO05D004696 4.5e-10 69.7 286 27.6
A09p12040 Brassica napus HOM05D004960 ORTHO05D004696 4.5e-10 69.7 295 27.5
C04p38300 Brassica napus HOM05D004960 ORTHO05D004696 4.5e-10 69.7 289 27.0
BraA09t36847Z Brassica rapa HOM05D004960 ORTHO05D004696 4.5e-10 69.7 295 27.5
Dinv43330 Davidia involucrata HOM05D004960 ORTHO05D004696 5.8e-10 69.3 224 28.6
Migut.J01407 Erythranthe guttata HOM05D004960 ORTHO05D004696 5.8e-10 69.3 297 24.2
HanXRQChr09g0244301 Helianthus annuus HOM05D012567 ORTHO05D004696 5.8e-10 69.3 313 25.9
CSS0034998 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 7.6e-10 68.9 299 25.8
Cc06_g13860 Coffea canephora HOM05D004960 ORTHO05D004696 7.6e-10 68.9 325 25.5
PSO063G2425 Papaver somniferum HOM05D004960 ORTHO05D004696 9.9e-10 68.6 309 23.9
THA.LOC104803513 Tarenaya hassleriana HOM05D004960 ORTHO05D004696 9.9e-10 68.6 285 24.9
TWI32G0132 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 9.9e-10 68.6 300 25.0
HPP92_010759 Vanilla planifolia HOM05D004960 ORTHO05D004696 1.7e-09 67.8 288 27.8
Thecc.09G163000 Theobroma cacao HOM05D004960 ORTHO05D004696 2.9e-09 67.0 216 28.2
CSS0015847 Camellia sinensis var. sinensis HOM05D004960 ORTHO05D004696 3.8e-09 66.6 285 25.3
SGA_v2.0_scaffold69G23316 Striga asiatica HOM05D004960 ORTHO05D004696 4.9e-09 66.2 297 24.2
Cc06_g13850 Coffea canephora HOM05D012567 ORTHO05D004696 6.4e-09 65.9 300 27.7
Rhsim01G0010200 Rhododendron simsii HOM05D004960 ORTHO05D004696 6.4e-09 65.9 318 24.2
Aqoxy7G03202 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 8.4e-09 65.5 278 24.5
SEGI_26894 Sequoiadendron giganteum HOM05D001062 ORTHO05D000884 8.4e-09 65.5 293 23.9
Actinidia38650 Actinidia chinensis HOM05D004960 ORTHO05D004696 1.1e-08 65.1 286 25.5
Aqoxy7G03206 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 1.1e-08 65.1 289 26.6
Lsat_1_v5_gn_7_52700 Lactuca sativa HOM05D004960 ORTHO05D004696 1.1e-08 65.1 292 25.7
PGSC0003DMG400034810 Solanum tuberosum HOM05D004960 ORTHO05D004696 1.1e-08 65.1 230 25.7
TWI12G0641 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.9e-08 64.3 310 25.5
Actinidia35989 Actinidia chinensis HOM05D004960 ORTHO05D004696 5.4e-08 62.8 284 25.0
Prupe.1G095800 Prunus persica HOM05D004960 ORTHO05D004696 5.4e-08 62.8 106 36.8
Rhsim01G0010300 Rhododendron simsii HOM05D004960 ORTHO05D004696 5.4e-08 62.8 296 23.0
Lsat_1_v5_gn_7_52621 Lactuca sativa HOM05D012567 ORTHO05D004696 7.1e-08 62.4 304 25.7
Aqoxy7G03204 Aquilegia oxysepala HOM05D004960 ORTHO05D004696 9.3e-08 62.0 291 24.7
BcaC04g21483 Brassica carinata HOM05D004960 ORTHO05D004696 9.3e-08 62.0 288 25.7
C09p31280 Brassica napus HOM05D004960 ORTHO05D004696 9.3e-08 62.0 288 25.7
C03p59340 Brassica napus HOM05D004960 ORTHO05D004696 1.2e-07 61.6 296 26.7
Dinv41300 Davidia involucrata HOM05D004960 ORTHO05D004696 2.1e-07 60.8 287 24.7
Oeu043380.1 Olea europaea HOM05D004960 ORTHO05D004696 2.7e-07 60.5 204 26.5
BcaC02g09087 Brassica carinata HOM05D004960 ORTHO05D004696 3.5e-07 60.1 288 26.7
CDE04G1275 Ceratophyllum demersum HOM05D000122 ORTHO05D000139 3.5e-07 60.1 297 23.9
MBI14_g30691_MAGBIO Magnolia biondii HOM05D004960 ORTHO05D004696 3.5e-07 60.1 286 23.4
BraA07t27990Z Brassica rapa HOM05D004960 ORTHO05D004696 4.6e-07 59.7 288 25.0
Eucgr.F04013 Eucalyptus grandis HOM05D004960 ORTHO05D004696 7.9e-07 58.9 309 26.5
Duzib168G0188 Durio zibethinus HOM05D004960 ORTHO05D004696 1.3e-06 58.2 279 25.8
TWI34G0908 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 1.3e-06 58.2 233 27.9
TWI12G0285 Tripterygium wilfordii HOM05D004960 ORTHO05D004696 2.3e-06 57.4 317 23.0
Cpa.g.sc75.10 Carica papaya HOM05D004960 ORTHO05D004696 3.9e-06 56.6 242 27.7
ClCG11G017010 Citrullus lanatus HOM05D001062 ORTHO05D000884 3.9e-06 56.6 304 25.0
Peaxi162Scf00457g00315 Petunia axillaris HOM05D004960 ORTHO05D004696 3.9e-06 56.6 111 30.6
AT2G18690 Arabidopsis thaliana HOM05D004960 ORTHO05D004696 5.1e-06 56.2 303 25.7
AL3G52080 Arabidopsis lyrata HOM05D004960 ORTHO05D004696 6.7e-06 55.8 300 26.0
BolC9t55984H Brassica oleracea HOM05D004960 ORTHO05D004696 6.7e-06 55.8 283 25.8
A06p33120 Brassica napus HOM05D004960 ORTHO05D004696 8.7e-06 55.5 296 26.0
TAR622G0247 Trochodendron aralioides HOM05D003615 ORTHO05D004858 8.7e-06 55.5 308 24.4


User provided reference genes

Program Settings