Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g30693_MAGBIO Magnolia biondii HOM05D000382 ORTHO05D004344 1.5e-30 135.6 70 100.0
MBI19_g28115_MAGBIO Magnolia biondii HOM05D003758 ORTHO05D004344 6.3e-13 77.0 44 90.9
Aqoxy1G00175 Aquilegia oxysepala HOM05D000382 ORTHO05D004910 7.7e-11 70.1 43 86.0
Migut.J01815 Erythranthe guttata HOM05D000382 ORTHO05D004910 7.7e-11 70.1 43 86.0
Glyma.19G145300 Glycine max HOM05D000382 ORTHO05D004910 7.7e-11 70.1 57 70.2
Lju124A32G74 Lonicera japonica HOM05D000382 ORTHO05D004910 7.7e-11 70.1 43 86.0
MBI04_g14273_MAGBIO Magnolia biondii HOM05D000382 ORTHO05D004910 7.7e-11 70.1 43 86.0
Glyma.03G142400 Glycine max HOM05D000382 ORTHO05D004910 1.0e-10 69.7 57 70.2
Nn7g36064 Nelumbo nucifera HOM05D000382 ORTHO05D004910 1.0e-10 69.7 43 86.0
MBI01_g15749_MAGBIO Magnolia biondii HOM05D000382 ORTHO05D004910 1.7e-10 68.9 43 83.7
TAR636G2818 Trochodendron aralioides HOM05D000382 ORTHO05D004910 1.7e-10 68.9 43 83.7
Lalb_Chr18g0047641 Lupinus albus HOM05D000382 ORTHO05D004910 2.2e-10 68.6 43 83.7
MSTRG.26096 Avicennia marina HOM05D000382 ORTHO05D004910 3.8e-10 67.8 43 83.7
TPR.G23149 Trifolium pratense HOM05D000382 ORTHO05D004910 3.8e-10 67.8 57 66.7
Phvul.001G140100 Phaseolus vulgaris HOM05D000382 ORTHO05D004910 5.0e-10 67.4 43 83.7
VMungo1383G0627 Vigna mungo HOM05D000382 ORTHO05D004910 5.0e-10 67.4 43 83.7
Actinidia09378 Actinidia chinensis HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
CSS0027990 Camellia sinensis var. sinensis HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
Cfa016892 Carpinus fangiana HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
Ciclev10031361m.g Citrus clementina HOM05D000382 ORTHO05D004910 6.5e-10 67.0 67 64.2
Haze_19946 Corylus avellana HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
Gohir.A09G126400 Gossypium hirsutum HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
QL07p022812 Quercus lobata HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
Sc19g0006950 Simmondsia chinensis HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
Thecc.05G167800 Theobroma cacao HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
TWI53G1207 Tripterygium wilfordii HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
TWI74G0132 Tripterygium wilfordii HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
TAR369G0758 Trochodendron aralioides HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
vmacro07938 Vaccinium macrocarpon HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
GSVIVG01033531001 Vitis vinifera HOM05D000382 ORTHO05D004910 6.5e-10 67.0 43 83.7
CiPaw.10G028400 Carya illinoinensis HOM05D000382 ORTHO05D004910 8.5e-10 66.6 43 83.7
Atru.chr6.1988 Acer truncatum HOM05D000382 ORTHO05D004910 1.5e-09 65.9 43 81.4
MSTRG.6462 Avicennia marina HOM05D000382 ORTHO05D004910 1.5e-09 65.9 43 81.4
Cc06_g16230 Coffea canephora HOM05D000382 ORTHO05D004910 1.5e-09 65.9 43 81.4
Lj1g0005974 Lotus japonicus HOM05D000382 ORTHO05D004910 1.5e-09 65.9 44 81.8
Medtr0126s0080 Medicago truncatula HOM05D000382 ORTHO05D004910 1.5e-09 65.9 43 81.4
Nitab4.5_0000016g0210 Nicotiana tabacum HOM05D000382 ORTHO05D004910 1.5e-09 65.9 43 81.4
Psat0s1113g0040 Pisum sativum HOM05D000382 ORTHO05D004910 1.5e-09 65.9 37 91.9
Cpa.g.sc85.93 Carica papaya HOM05D000382 ORTHO05D004910 1.9e-09 65.5 43 81.4
Rhsim03G0009400 Rhododendron simsii HOM05D000382 ORTHO05D004910 1.9e-09 65.5 63 63.5
Rhsim03G0013100 Rhododendron simsii HOM05D000382 ORTHO05D004910 1.9e-09 65.5 63 63.5
TPR.G35765 Trifolium pratense HOM05D000382 ORTHO05D004910 1.9e-09 65.5 59 66.1
CiPaw.09G032700 Carya illinoinensis HOM05D000382 ORTHO05D004910 2.5e-09 65.1 57 63.2
Gohir.D09G123100 Gossypium hirsutum HOM05D000382 ORTHO05D004910 2.5e-09 65.1 41 85.4
Gorai.006G141000 Gossypium raimondii HOM05D000382 ORTHO05D004910 2.5e-09 65.1 41 85.4
Psat6g121080 Pisum sativum HOM05D000382 ORTHO05D004910 3.2e-09 64.7 59 62.7
SGA_v2.0_scaffold105G30473 Striga asiatica HOM05D000382 ORTHO05D004910 3.2e-09 64.7 68 57.4
ATR0605G386 Amborella trichopoda HOM05D000382 ORTHO05D004910 4.2e-09 64.3 43 81.4
CANSAT64G2019 Cannabis sativa HOM05D000382 ORTHO05D004910 4.2e-09 64.3 38 89.5
Duzib093G2119 Durio zibethinus HOM05D000382 ORTHO05D004910 4.2e-09 64.3 43 79.1
Gorai.002G228200 Gossypium raimondii HOM05D000382 ORTHO05D004910 4.2e-09 64.3 45 82.2
arahy.Tifrunner.gnm1.ann1.5F9GBV Arachis hypogaea HOM05D000382 ORTHO05D004910 5.5e-09 63.9 43 81.4
arahy.Tifrunner.gnm1.ann1.R4ID1P Arachis hypogaea HOM05D000382 ORTHO05D004910 5.5e-09 63.9 43 81.4
Ca_12102_v3 Cicer arietinum L. HOM05D000382 ORTHO05D004910 5.5e-09 63.9 43 81.4
Lj5g0016375 Lotus japonicus HOM05D000382 ORTHO05D004910 5.5e-09 63.9 43 81.4
Duzib128G0782 Durio zibethinus HOM05D000382 ORTHO05D004910 7.2e-09 63.5 43 81.4
Manes.08G046700 Manihot esculenta HOM05D000382 ORTHO05D004910 7.2e-09 63.5 75 58.7
Medtr7g092750 Medicago truncatula HOM05D000382 ORTHO05D004910 7.2e-09 63.5 37 89.2
Nitab4.5_0002681g0020 Nicotiana tabacum HOM05D000382 ORTHO05D004910 7.2e-09 63.5 43 79.1
Potri.006G058800 Populus trichocarpa HOM05D000382 ORTHO05D004910 9.4e-09 63.2 44 81.8
Hund24779 Selenicereus undatus HOM05D000382 ORTHO05D004910 9.4e-09 63.2 43 81.4
ClCG10G017360 Citrullus lanatus HOM05D000382 ORTHO05D004910 1.6e-08 62.4 48 72.9
CsaV3_3G039040 Cucumis sativus L. HOM05D000382 ORTHO05D004910 1.6e-08 62.4 43 79.1
FvH4_6g22750 Fragaria vesca HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
FAN02G2828 Fragaria x ananassa HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
FAN05G4625 Fragaria x ananassa HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
Gohir.A01G194600 Gossypium hirsutum HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
Gohir.D01G184800 Gossypium hirsutum HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
MD12G1061900 Malus domestica HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
MD14G1062300 Malus domestica HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
Manes.09G031700 Manihot esculenta HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
Nitab4.5_0004063g0120 Nicotiana tabacum HOM05D000382 ORTHO05D004910 1.6e-08 62.4 43 79.1
Nitab4.5_0006853g0020 Nicotiana tabacum HOM05D000382 ORTHO05D004910 1.6e-08 62.4 43 79.1
Prupe.7G073000 Prunus persica HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
RcHm_v2.0_Chr3g0480361 Rosa chinensis HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
Sabra06G0042300 Salix brachista HOM05D000382 ORTHO05D004910 1.6e-08 62.4 44 81.8
Oeu033749.1 Olea europaea HOM05D000382 ORTHO05D004910 2.1e-08 62.0 60 61.7
Sed0013219 Sechium edule HOM05D000382 ORTHO05D004910 2.1e-08 62.0 60 61.7
Duzib106G0645 Durio zibethinus HOM05D000382 ORTHO05D004910 2.7e-08 61.6 43 79.1
Glyma.10G092100 Glycine max HOM05D000382 ORTHO05D004910 2.7e-08 61.6 43 79.1
VMungo0720G3023 Vigna mungo HOM05D000382 ORTHO05D004910 2.7e-08 61.6 43 79.1
Ca_08501_v3 Cicer arietinum L. HOM05D000382 ORTHO05D004910 3.6e-08 61.2 38 86.8
DCAR_013560 Daucus carota HOM05D000382 ORTHO05D004910 3.6e-08 61.2 38 84.2
MELO3C009647.2 Cucumis melo HOM05D000382 ORTHO05D004910 4.7e-08 60.8 43 76.7
Dinv14269 Davidia involucrata HOM05D000382 ORTHO05D004910 6.1e-08 60.5 43 76.7
Glyma.02G176800 Glycine max HOM05D000382 ORTHO05D004910 6.1e-08 60.5 57 64.9
Sed0016563 Sechium edule HOM05D000382 ORTHO05D004910 8.0e-08 60.1 43 76.7
PGR004G2402 Punica granatum HOM05D000382 ORTHO05D004910 1.4e-07 59.3 43 74.4
FAN14G4438 Fragaria x ananassa HOM05D000382 ORTHO05D004910 1.8e-07 58.9 44 79.5
Peaxi162Scf00258g00009 Petunia axillaris HOM05D000382 ORTHO05D004910 1.8e-07 58.9 44 77.3
CAN.G128.31 Capsicum annuum HOM05D000382 ORTHO05D004910 3.0e-07 58.2 43 74.4
PSO339G0714 Papaver somniferum HOM05D000382 ORTHO05D004910 3.0e-07 58.2 44 68.2
PSO384G3130 Papaver somniferum HOM05D000382 ORTHO05D004910 3.0e-07 58.2 44 68.2
Potri.016G049200 Populus trichocarpa HOM05D000382 ORTHO05D004910 3.0e-07 58.2 44 77.3
Sabra16G0053100 Salix brachista HOM05D000382 ORTHO05D004910 3.0e-07 58.2 60 60.0
SEGI_35374 Sequoiadendron giganteum HOM05D000382 ORTHO05D000391 5.2e-07 57.4 58 60.3
Eucgr.K01822 Eucalyptus grandis HOM05D000382 ORTHO05D004910 6.7e-07 57.0 44 77.3
Sc25g0005150 Simmondsia chinensis HOM05D000382 ORTHO05D004910 8.8e-07 56.6 43 72.1
HanXRQChr10g0298231 Helianthus annuus HOM05D000382 ORTHO05D004910 1.2e-06 56.2 76 50.0
TAR633G0874 Trochodendron aralioides HOM05D000382 ORTHO05D004910 1.2e-06 56.2 44 75.0
MSTRG.10834 Avicennia marina HOM05D000382 ORTHO05D004910 1.5e-06 55.8 43 72.1
ECA247G3800 Erigeron canadensis HOM05D000382 ORTHO05D004910 2.0e-06 55.5 43 69.8
Eucgr.A02436 Eucalyptus grandis HOM05D000382 ORTHO05D004910 2.0e-06 55.5 44 72.7
CDE07G0077 Ceratophyllum demersum HOM05D000382 ORTHO05D004910 2.6e-06 55.1 43 72.1
Lsat_1_v5_gn_9_27821 Lactuca sativa HOM05D000382 ORTHO05D004910 3.3e-06 54.7 77 49.4
HPP92_023779 Vanilla planifolia HOM05D000382 ORTHO05D004910 3.3e-06 54.7 43 72.1
Aa31LG11G7700 Aethionema arabicum HOM05D000382 ORTHO05D004910 5.7e-06 53.9 43 69.8
SalBow1G5932 Salvia bowleyana HOM05D000382 ORTHO05D004910 5.7e-06 53.9 43 69.8


User provided reference genes

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