Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g30459_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 1.4e-84 316.2 163 100.0
MBI07_g22362_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 6.2e-80 300.8 163 95.1
MBI07_g15427_MAGBIO Magnolia biondii HOM05D006656 ORTHO05D008208 3.9e-74 281.6 163 90.8
Potri.010G068200 Populus trichocarpa HOM05D006656 ORTHO05D008208 1.4e-66 256.5 159 80.5
Nn1g02903 Nelumbo nucifera HOM05D006656 ORTHO05D008208 1.8e-66 256.1 160 80.0
arahy.Tifrunner.gnm1.ann1.CLZM2Q Arachis hypogaea HOM05D006656 ORTHO05D008208 3.9e-66 255.0 159 77.4
TWI09G0269 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 3.9e-66 255.0 159 79.2
TWI09G1522 Tripterygium wilfordii HOM05D006656 ORTHO05D008208 3.9e-66 255.0 159 79.2
QL06p020043 Quercus lobata HOM05D006656 ORTHO05D008208 5.1e-66 254.6 159 79.2
Dinv29827 Davidia involucrata HOM05D006656 ORTHO05D008208 8.8e-66 253.8 159 79.2
Eucgr.H02989 Eucalyptus grandis HOM05D006656 ORTHO05D008208 8.8e-66 253.8 161 80.1
Glyma.10G005200 Glycine max HOM05D006656 ORTHO05D008208 1.1e-65 253.4 159 76.7
CiPaw.01G180600 Carya illinoinensis HOM05D006656 ORTHO05D008208 5.7e-65 251.1 157 79.6
Hund11920 Selenicereus undatus HOM05D006656 ORTHO05D008208 5.7e-65 251.1 155 79.4
Nitab4.5_0001425g0100 Nicotiana tabacum HOM05D006656 ORTHO05D008208 7.4e-65 250.8 161 75.8
Ciclev10006077m.g Citrus clementina HOM05D006656 ORTHO05D008208 9.7e-65 250.4 161 76.4
Dinv27090 Davidia involucrata HOM05D006656 ORTHO05D008208 9.7e-65 250.4 159 78.6
Phvul.007G275000 Phaseolus vulgaris HOM05D006656 ORTHO05D008208 9.7e-65 250.4 159 76.1
SalBow3G1837 Salvia bowleyana HOM05D006656 ORTHO05D008208 9.7e-65 250.4 159 78.0
Gohir.D09G229300 Gossypium hirsutum HOM05D006656 ORTHO05D008208 1.3e-64 250.0 161 77.6
Gorai.006G252000 Gossypium raimondii HOM05D006656 ORTHO05D008208 1.3e-64 250.0 161 77.6
RcHm_v2.0_Chr4g0394701 Rosa chinensis HOM05D006656 ORTHO05D008208 1.3e-64 250.0 156 80.8
MD13G1218700 Malus domestica HOM05D006656 ORTHO05D008208 1.7e-64 249.6 156 79.5
FvH4_4g04220 Fragaria vesca HOM05D006656 ORTHO05D008208 2.2e-64 249.2 156 80.1
Atru.chr4.1959 Acer truncatum HOM05D006656 ORTHO05D008208 2.8e-64 248.8 151 81.5
CSS0031602 Camellia sinensis var. sinensis HOM05D006656 ORTHO05D008208 2.8e-64 248.8 157 78.3
COL.COLO4_15934 Corchorus olitorius HOM05D006656 ORTHO05D008208 2.8e-64 248.8 158 76.6
Manes.13G093430 Manihot esculenta HOM05D006656 ORTHO05D008208 2.8e-64 248.8 158 77.8
Gohir.A09G228200 Gossypium hirsutum HOM05D006656 ORTHO05D008208 3.7e-64 248.4 157 79.0
HanXRQChr04g0115371 Helianthus annuus HOM05D006656 ORTHO05D008208 8.2e-64 247.3 160 76.2
Medtr1g041795 Medicago truncatula HOM05D006656 ORTHO05D008208 1.1e-63 246.9 157 77.7
Solyc09g090430.3 Solanum lycopersicum HOM05D006656 ORTHO05D008208 1.1e-63 246.9 158 75.9
Sopen09g033350 Solanum pennellii HOM05D006656 ORTHO05D008208 1.1e-63 246.9 158 75.9
PGSC0003DMG400017160 Solanum tuberosum HOM05D006656 ORTHO05D008208 1.1e-63 246.9 158 76.6
Lj6g0027143 Lotus japonicus HOM05D006656 ORTHO05D008208 1.4e-63 246.5 159 76.1
Peaxi162Scf00602g00515 Petunia axillaris HOM05D006656 ORTHO05D008208 1.8e-63 246.1 160 75.0
ClCG05G004140 Citrullus lanatus HOM05D006656 ORTHO05D008208 2.4e-63 245.7 159 76.7
THA.LOC104804764 Tarenaya hassleriana HOM05D006656 ORTHO05D008208 2.4e-63 245.7 160 75.6
CAN.G220.47 Capsicum annuum HOM05D006656 ORTHO05D008208 3.1e-63 245.4 160 74.4
Ca_12138_v3 Cicer arietinum L. HOM05D006656 ORTHO05D008208 3.1e-63 245.4 159 76.1
FAN12G3008 Fragaria x ananassa HOM05D006656 ORTHO05D008208 3.1e-63 245.4 156 78.8
Sc25g0003620 Simmondsia chinensis HOM05D006656 ORTHO05D008208 3.1e-63 245.4 156 78.8
HanXRQChr01g0022881 Helianthus annuus HOM05D006656 ORTHO05D008208 4.1e-63 245.0 159 76.7
Hma1.2p1_0112F.1_g054500 Hydrangea macrophylla HOM05D006656 ORTHO05D008208 4.1e-63 245.0 159 78.6
Nitab4.5_0013448g0010 Nicotiana tabacum HOM05D006656 ORTHO05D008208 4.1e-63 245.0 158 75.3
Aqoxy2G03715 Aquilegia oxysepala HOM05D006656 ORTHO05D008208 5.3e-63 244.6 158 75.9
Cpa.g.sc44.21 Carica papaya HOM05D006656 ORTHO05D008208 6.9e-63 244.2 159 74.8
MSTRG.4156 Avicennia marina HOM05D006656 ORTHO05D008208 9.1e-63 243.8 159 73.6
Lalb_Chr03g0037311 Lupinus albus HOM05D006656 ORTHO05D008208 1.2e-62 243.4 158 75.9
CANSAT78G1635 Cannabis sativa HOM05D006656 ORTHO05D008208 3.4e-62 241.9 156 76.9
ECA248G3216 Erigeron canadensis HOM05D006656 ORTHO05D008208 5.9e-62 241.1 160 75.0
Sed0021014 Sechium edule HOM05D006656 ORTHO05D008208 7.7e-62 240.7 159 76.7
Thecc.04G260300 Theobroma cacao HOM05D006656 ORTHO05D008208 7.7e-62 240.7 162 74.7
Prupe.1G045500 Prunus persica HOM05D006656 ORTHO05D008208 1.0e-61 240.4 156 76.9
CsaV3_3G011860 Cucumis sativus L. HOM05D006656 ORTHO05D008208 1.3e-61 240.0 159 75.5
Migut.G00494 Erythranthe guttata HOM05D006656 ORTHO05D008208 1.7e-61 239.6 157 75.8
TPR.G25151 Trifolium pratense HOM05D006656 ORTHO05D008208 2.2e-61 239.2 157 74.5
EL10Ac3g04969 Beta vulgaris HOM05D006656 ORTHO05D008208 2.9e-61 238.8 163 73.0
Actinidia39917 Actinidia chinensis HOM05D006656 ORTHO05D008208 3.8e-61 238.4 154 76.0
Lsat_1_v5_gn_1_75161 Lactuca sativa HOM05D006656 ORTHO05D008208 3.8e-61 238.4 158 77.2
Sabra10G0038900 Salix brachista HOM05D006656 ORTHO05D008208 3.8e-61 238.4 149 79.9
arahy.Tifrunner.gnm1.ann1.C3VAXP Arachis hypogaea HOM05D006656 ORTHO05D008208 5.0e-61 238.0 151 76.2
Sp3g21170 Schrenkiella parvula HOM05D006656 ORTHO05D008208 6.5e-61 237.7 160 73.8
SpUn0047_0050 Schrenkiella parvula HOM05D006656 ORTHO05D008208 6.5e-61 237.7 160 73.8
BcaC06g35534 Brassica carinata HOM05D006656 ORTHO05D008208 8.5e-61 237.3 160 73.8
BolC7t41871H Brassica oleracea HOM05D006656 ORTHO05D008208 8.5e-61 237.3 160 73.8
AL3G38180 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 1.1e-60 236.9 160 73.1
AT3G23490 Arabidopsis thaliana HOM05D006656 ORTHO05D008208 1.1e-60 236.9 160 73.1
Thhalv10021585m.g Eutrema salsugineum HOM05D006656 ORTHO05D008208 1.1e-60 236.9 160 71.9
arahy.Tifrunner.gnm1.ann1.DD5QG4 Arachis hypogaea HOM05D006656 ORTHO05D008208 1.4e-60 236.5 152 75.0
BcaB06g26499 Brassica carinata HOM05D006656 ORTHO05D008208 1.4e-60 236.5 160 73.1
PGR004G1080 Punica granatum HOM05D006656 ORTHO05D008208 1.4e-60 236.5 157 75.8
BraA07t28683Z Brassica rapa HOM05D006656 ORTHO05D008208 1.9e-60 236.1 160 73.1
A07p08920 Brassica napus HOM05D006656 ORTHO05D008208 2.5e-60 235.7 160 72.5
C07p13760 Brassica napus HOM05D006656 ORTHO05D008208 2.5e-60 235.7 160 73.1
PSO210G7176 Papaver somniferum HOM05D006656 ORTHO05D008208 2.5e-60 235.7 157 74.5
HPP92_001387 Vanilla planifolia HOM05D006656 ORTHO05D008208 2.5e-60 235.7 154 76.0
DCAR_030758 Daucus carota HOM05D000730 ORTHO05D008208 3.2e-60 235.3 148 75.7
FAN17G2925 Fragaria x ananassa HOM05D006656 ORTHO05D008208 3.2e-60 235.3 157 77.1
VMungo0720G2665 Vigna mungo HOM05D006656 ORTHO05D008208 3.2e-60 235.3 149 76.5
Psat6g137160 Pisum sativum HOM05D006656 ORTHO05D008208 7.2e-60 234.2 149 77.9
ATR0736G110 Amborella trichopoda HOM05D006656 ORTHO05D008208 9.4e-60 233.8 159 70.4
Rhsim02G0042500 Rhododendron simsii HOM05D006656 ORTHO05D008208 1.2e-59 233.4 150 76.7
Os10g0471300 Oryza sativa ssp. japonica HOM05D006656 ORTHO05D008208 4.7e-59 231.5 156 73.1
PSO447G0273 Papaver somniferum HOM05D006656 ORTHO05D008208 4.7e-59 231.5 157 73.2
Carub.0003s2372 Capsella rubella HOM05D006656 ORTHO05D008208 7.9e-59 230.7 160 71.2
CDE02G2281 Ceratophyllum demersum HOM05D006656 ORTHO05D008208 1.8e-58 229.6 163 71.2
Ah.13g072350 Amaranthus hybridus HOM05D006656 ORTHO05D008208 8.8e-58 227.3 156 72.4
Aa31LG8G9940 Aethionema arabicum HOM05D006656 ORTHO05D008208 1.5e-57 226.5 151 74.8
vmacro15465 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 2.6e-57 225.7 141 78.7
AUR62015536 Chenopodium quinoa HOM05D006656 ORTHO05D008208 3.3e-57 225.3 182 66.5
AUR62002173 Chenopodium quinoa HOM05D006656 ORTHO05D008208 1.7e-56 223.0 144 77.8
SGA_v2.0_scaffold67G22735 Striga asiatica HOM05D006656 ORTHO05D008208 1.8e-55 219.5 195 61.0
Zm00001eb046120 Zea mays HOM05D006656 ORTHO05D008208 1.2e-54 216.9 160 71.9
Lj3A676G52 Lonicera japonica HOM05D006656 ORTHO05D008208 8.5e-53 210.7 177 63.8
Pp3c19_11440 Physcomitrium patens HOM05D006656 ORTHO05D008208 1.9e-52 209.5 157 63.1
vmacro15466 Vaccinium macrocarpon HOM05D006656 ORTHO05D008208 3.7e-48 195.3 164 64.0
GSVIVG01027874001 Vitis vinifera HOM05D006656 ORTHO05D008208 7.2e-44 181.0 91 92.3
Mapoly0080s0009 Marchantia polymorpha HOM05D006656 ORTHO05D008208 1.6e-43 179.9 151 57.6
AagrBONN_evm.TU.Sc2ySwM_344.2747 Anthoceros agrestis HOM05D006656 ORTHO05D008208 4.4e-41 171.8 162 52.5
Cc03_g05940 Coffea canephora HOM05D006656 ORTHO05D008208 9.7e-41 170.6 91 84.6
Cfa014756 Carpinus fangiana HOM05D006656 ORTHO05D008208 6.3e-40 167.9 113 75.2
MELO3C006399.2 Cucumis melo HOM05D000603 ORTHO05D003510 7.0e-39 164.5 151 57.6
Haze_11433 Corylus avellana HOM05D006656 ORTHO05D008208 2.7e-38 162.5 262 40.8
Duzib151G0018 Durio zibethinus HOM05D006656 ORTHO05D008208 4.5e-38 161.8 122 68.9
HPP92_000029 Vanilla planifolia HOM05D006656 ORTHO05D008208 5.9e-38 161.4 162 58.0
AL242U10020 Arabidopsis lyrata HOM05D006656 ORTHO05D008208 1.0e-37 160.6 115 71.3
PRCOL_00005673 Prasinoderma coloniale HOM05D006656 ORTHO05D008208 3.6e-35 152.1 154 49.4
CBR_g71972 Chara braunii HOM05D006656 ORTHO05D008208 8.0e-35 151.0 155 51.6
CBR_g36666 Chara braunii HOM05D006656 ORTHO05D008208 1.0e-34 150.6 149 51.7
SMO271G0046 Selaginella moellendorffii HOM05D006656 ORTHO05D008208 2.5e-28 129.4 140 47.1
arahy.Tifrunner.gnm1.ann1.USJ12Z Arachis hypogaea HOM05D006656 ORTHO05D008208 9.8e-25 117.5 87 66.7
Gohir.A02G041301 Gossypium hirsutum HOM05D006656 ORTHO05D008208 8.9e-18 94.4 63 69.8
Nitab4.5_0000014g0170 Nicotiana tabacum HOM05D006656 ORTHO05D008208 1.1e-15 87.4 77 58.4
BcaB02g10054 Brassica carinata HOM05D006656 ORTHO05D008208 1.2e-14 84.0 64 65.6
AagrBONN_evm.TU.Sc2ySwM_344.2745 Anthoceros agrestis HOM05D006656 ORTHO05D008208 1.6e-14 83.6 82 52.4
BcaB06g27105 Brassica carinata HOM05D006656 ORTHO05D008208 3.0e-13 79.3 49 73.5
BolC2t11169H Brassica oleracea HOM05D006656 ORTHO05D008208 1.6e-11 73.6 55 65.5
BcaC09g51699 Brassica carinata HOM05D006656 ORTHO05D008208 4.7e-11 72.0 45 73.3
MCO04G243 Micromonas commoda HOM05D006656 ORTHO05D008208 5.8e-09 65.1 147 32.0
C05p47480 Brassica napus HOM05D006656 ORTHO05D008208 3.7e-08 62.4 37 78.4
HPP92_027915 Vanilla planifolia HOM05D003501 ORTHO05D004388 4.9e-08 62.0 50 64.0
C03p47720 Brassica napus HOM05D006656 ORTHO05D008208 2.4e-07 59.7 37 73.0


User provided reference genes

Program Settings