Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g28631_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 5.9e-35 150.2 71 100.0
MBI15_g16135_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 9.8e-22 106.3 55 87.3
MBI12_g23370_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 4.1e-20 100.9 55 83.6
MBI09_g36554_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 2.1e-19 98.6 55 81.8
MBI09_g14149_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 4.6e-19 97.4 54 81.5
MBI15_g26855_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 1.8e-15 85.5 55 63.6
MBI13_g10220_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 5.2e-15 84.0 55 65.5
MBI17_g25951_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 3.4e-14 81.3 55 63.6
MBI15_g34794_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 9.9e-14 79.7 55 58.2
MBI19_g45010_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 9.9e-14 79.7 55 60.0
MBI12_g03913_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 2.9e-13 78.2 55 61.8
MBI15_g14880_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 3.7e-13 77.8 55 58.2
MBI15_g45925_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 6.4e-13 77.0 55 60.0
MBI19_g20574_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 8.3e-13 76.6 55 60.0
MBI17_g25609_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 2.4e-12 75.1 55 60.0
MBI11_g40894_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 3.2e-12 74.7 54 59.3
MBI02_g15236_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 7.1e-12 73.6 50 64.0
MBI13_g31585_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 7.1e-12 73.6 43 79.1
MBI15_g04617_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 7.1e-12 73.6 53 66.0
MBI08_g23115_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 2.1e-11 72.0 36 88.9
MBI18_g19666_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 2.7e-11 71.6 50 64.0
MBI14_g13643_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 4.6e-11 70.9 50 60.0
QL01p039642 Quercus lobata HOM05D000045 ORTHO05D000067 6.6e-10 67.0 50 58.0
QL04p049080 Quercus lobata HOM05D000045 ORTHO05D000067 6.6e-10 67.0 50 58.0
MBI07_g36704_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 8.6e-10 66.6 55 54.5
TAR515G0006 Trochodendron aralioides HOM05D000045 ORTHO05D004773 1.1e-09 66.2 52 53.8
HPP92_009461 Vanilla planifolia HOM05D000045 ORTHO05D000067 1.1e-09 66.2 55 45.5
Aqoxy2G03355 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.5e-09 65.9 50 52.0
Os07g0563600 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.5e-09 65.9 55 49.1
CANSAT64G2947 Cannabis sativa HOM05D000045 ORTHO05D000067 3.3e-09 64.7 56 53.6
MBI15_g02579_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 3.3e-09 64.7 45 62.2
COL.COLO4_23494 Corchorus olitorius HOM05D000045 ORTHO05D000067 7.3e-09 63.5 55 45.5
TAR483G0002 Trochodendron aralioides HOM05D000045 ORTHO05D000067 7.3e-09 63.5 50 54.0
Cfa008288 Carpinus fangiana HOM05D000045 ORTHO05D000067 1.2e-08 62.8 53 43.4
HPP92_013275 Vanilla planifolia HOM05D000045 ORTHO05D000067 1.2e-08 62.8 55 47.3
COL.COLO4_24114 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.6e-08 62.4 55 45.5
COL.COLO4_34876 Corchorus olitorius HOM05D000045 ORTHO05D000067 1.6e-08 62.4 55 45.5
COL.COLO4_20433 Corchorus olitorius HOM05D000045 ORTHO05D000067 2.1e-08 62.0 55 45.5
HPP92_000949 Vanilla planifolia HOM05D000045 ORTHO05D000067 2.1e-08 62.0 55 45.5
HPP92_019288 Vanilla planifolia HOM05D000045 ORTHO05D000067 3.6e-08 61.2 55 41.8
CiPaw.03G103400 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.7e-08 60.8 53 45.3
MBI13_g20249_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 6.2e-08 60.5 36 77.8
Aqoxy5G01360 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 8.1e-08 60.1 50 52.0
Gorai.006G037100 Gossypium raimondii HOM05D000045 ORTHO05D000067 8.1e-08 60.1 64 39.1
RcHm_v2.0_Chr1g0376821 Rosa chinensis HOM05D000045 ORTHO05D000067 8.1e-08 60.1 53 49.1
Duzib205G0811 Durio zibethinus HOM05D000045 ORTHO05D000067 1.1e-07 59.7 53 45.3
FvH4_2g38071 Fragaria vesca HOM05D000045 ORTHO05D000067 1.1e-07 59.7 50 52.0
MBI17_g05576_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 1.1e-07 59.7 46 54.3
PSO210G1173 Papaver somniferum HOM05D000045 ORTHO05D000067 1.1e-07 59.7 50 52.0
Gohir.D09G032200 Gossypium hirsutum HOM05D000045 ORTHO05D000067 1.4e-07 59.3 64 39.1
QL93p0073_0888 Quercus lobata HOM05D000045 ORTHO05D004773 1.4e-07 59.3 55 40.0
Ciclev10014295m.g Citrus clementina HOM05D000045 ORTHO05D000067 1.8e-07 58.9 53 39.6
Os07g0615900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.8e-07 58.9 55 43.6
PSO170G6512 Papaver somniferum HOM05D000045 ORTHO05D000067 1.8e-07 58.9 50 52.0
Atru.chr3.2441 Acer truncatum HOM05D000045 ORTHO05D000067 2.4e-07 58.5 53 41.5
CANSAT01G2577 Cannabis sativa HOM05D000045 ORTHO05D000067 2.4e-07 58.5 50 48.0
Cpa.g.sc107.20 Carica papaya HOM05D000045 ORTHO05D000067 3.1e-07 58.2 52 42.3
MBI11_g09463_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 3.1e-07 58.2 40 60.0
Os03g0777700 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 3.1e-07 58.2 52 46.2
CANSAT64G0193 Cannabis sativa HOM05D000045 ORTHO05D000067 4.0e-07 57.8 50 48.0
Gohir.A09G032100 Gossypium hirsutum HOM05D000045 ORTHO05D000067 5.2e-07 57.4 53 41.5
Psat1g083280 Pisum sativum HOM05D000045 ORTHO05D000067 5.2e-07 57.4 52 44.2
Rhsim08G0046500 Rhododendron simsii HOM05D000045 ORTHO05D000067 5.2e-07 57.4 53 43.4
Thecc.03G171700 Theobroma cacao HOM05D000045 ORTHO05D000067 5.2e-07 57.4 53 43.4
Duzib147G0739 Durio zibethinus HOM05D000045 ORTHO05D000067 6.8e-07 57.0 53 43.4
Os07g0496300 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 6.8e-07 57.0 54 42.6
MBI19_g24815_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 8.9e-07 56.6 39 61.5
Prupe.2G291000 Prunus persica HOM05D000045 ORTHO05D000067 1.2e-06 56.2 53 45.3
QL02p073271 Quercus lobata HOM05D000045 ORTHO05D000067 1.5e-06 55.8 53 41.5
Actinidia03110 Actinidia chinensis HOM05D000045 ORTHO05D000067 2.0e-06 55.5 55 43.6
Actinidia26118 Actinidia chinensis HOM05D000045 ORTHO05D000067 2.0e-06 55.5 51 45.1
Os04g0615900 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 2.0e-06 55.5 48 45.8
PSO700G0356 Papaver somniferum HOM05D000045 ORTHO05D000067 2.0e-06 55.5 43 53.5
Thecc.04G026200 Theobroma cacao HOM05D000045 ORTHO05D000067 2.0e-06 55.5 53 43.4
HPP92_017086 Vanilla planifolia HOM05D000045 ORTHO05D000067 2.0e-06 55.5 50 44.0
Gohir.A09G040300 Gossypium hirsutum HOM05D000045 ORTHO05D000067 2.6e-06 55.1 53 41.5
Os03g0181600 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 2.6e-06 55.1 55 43.6
CiPaw.04G032300 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.4e-06 54.7 53 37.7
Dinv28471 Davidia involucrata HOM05D000045 ORTHO05D000067 3.4e-06 54.7 48 45.8
Glyma.05G072100 Glycine max HOM05D000045 ORTHO05D000067 3.4e-06 54.7 52 40.4
MD01G1197600 Malus domestica HOM05D000045 ORTHO05D000067 3.4e-06 54.7 53 45.3
Sabra12G0103000 Salix brachista HOM05D000045 ORTHO05D000067 3.4e-06 54.7 53 39.6
Gohir.D09G040975 Gossypium hirsutum HOM05D000045 ORTHO05D000067 4.4e-06 54.3 53 41.5
Gorai.006G047000 Gossypium raimondii HOM05D000045 ORTHO05D000067 4.4e-06 54.3 53 41.5
PSO017G5463 Papaver somniferum HOM05D000045 ORTHO05D000067 4.4e-06 54.3 50 46.0
Ciclev10018794m.g Citrus clementina HOM05D000045 ORTHO05D000067 5.8e-06 53.9 53 41.5
Migut.H00048 Erythranthe guttata HOM05D000045 ORTHO05D000067 5.8e-06 53.9 53 41.5
MBI09_g15830_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D004773 5.8e-06 53.9 49 46.9
MD17G1186900 Malus domestica HOM05D000045 ORTHO05D000067 5.8e-06 53.9 55 43.6
PSO063G4645 Papaver somniferum HOM05D000045 ORTHO05D000067 5.8e-06 53.9 48 47.9
PSO170G3333 Papaver somniferum HOM05D000045 ORTHO05D021160 5.8e-06 53.9 48 47.9
Potri.012G137500 Populus trichocarpa HOM05D000045 ORTHO05D000067 5.8e-06 53.9 53 41.5
TPR.G7496 Trifolium pratense HOM05D000045 ORTHO05D000067 5.8e-06 53.9 52 40.4
PSO063G1714 Papaver somniferum HOM05D000045 ORTHO05D000067 7.6e-06 53.5 54 44.4
Rhsim03G0106600 Rhododendron simsii HOM05D000045 ORTHO05D000067 7.6e-06 53.5 50 44.0
TPR.G17425 Trifolium pratense HOM05D000045 ORTHO05D000067 7.6e-06 53.5 48 45.8
Atru.chr5.514 Acer truncatum HOM05D000045 ORTHO05D000067 9.9e-06 53.1 53 39.6
Eucgr.B01750 Eucalyptus grandis HOM05D000045 ORTHO05D000067 9.9e-06 53.1 47 48.9
PSO541G3807 Papaver somniferum HOM05D000045 ORTHO05D000067 9.9e-06 53.1 47 46.8
Prupe.1G194600 Prunus persica HOM05D000045 ORTHO05D000067 9.9e-06 53.1 40 52.5
QL06p047907 Quercus lobata HOM05D000045 ORTHO05D000067 9.9e-06 53.1 52 42.3
Rhsim09G0196900 Rhododendron simsii HOM05D000045 ORTHO05D000067 9.9e-06 53.1 52 42.3


User provided reference genes

Program Settings