Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g28605_MAGBIO Magnolia biondii HOM05D005372 ORTHO05D006593 3.7e-60 235.0 143 100.0
Dinv17075 Davidia involucrata HOM05D005372 ORTHO05D006593 1.8e-38 162.9 143 77.6
Dinv43019 Davidia involucrata HOM05D005372 ORTHO05D006593 1.8e-38 162.9 143 77.6
Dinv43078 Davidia involucrata HOM05D005372 ORTHO05D006593 1.8e-38 162.9 143 77.6
MD03G1080100 Malus domestica HOM05D005372 ORTHO05D006593 1.5e-37 159.8 77 90.9
MD11G1084700 Malus domestica HOM05D005372 ORTHO05D006593 1.5e-37 159.8 77 90.9
Prupe.6G065000 Prunus persica HOM05D005372 ORTHO05D006593 1.5e-37 159.8 77 90.9
Nn3g19715 Nelumbo nucifera HOM05D005372 ORTHO05D006593 5.7e-37 157.9 79 87.3
PSO541G6474 Papaver somniferum HOM05D005372 ORTHO05D006593 7.5e-37 157.5 77 88.3
PSO675G4385 Papaver somniferum HOM05D005372 ORTHO05D006593 2.2e-36 156.0 77 87.0
TAR636G0867 Trochodendron aralioides HOM05D005372 ORTHO05D006593 2.2e-36 156.0 141 62.4
Hma1.2p1_0543F.1_g175310 Hydrangea macrophylla HOM05D005372 ORTHO05D006593 2.8e-36 155.6 141 74.5
RcHm_v2.0_Chr5g0067341 Rosa chinensis HOM05D005372 ORTHO05D006593 3.7e-36 155.2 79 83.5
ECA247G0538 Erigeron canadensis HOM05D005372 ORTHO05D006593 1.1e-35 153.7 79 83.5
HanXRQChr03g0083951 Helianthus annuus HOM05D005372 ORTHO05D006593 1.1e-35 153.7 79 82.3
Aqoxy4G02649 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 1.4e-35 153.3 77 87.0
TWI79G0177 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 1.8e-35 152.9 73 90.4
TAR633G2482 Trochodendron aralioides HOM05D005372 ORTHO05D006593 2.4e-35 152.5 141 70.2
CiPaw.14G062800 Carya illinoinensis HOM05D005372 ORTHO05D006593 3.1e-35 152.1 79 83.5
Duzib168G1893 Durio zibethinus HOM05D005372 ORTHO05D006593 3.1e-35 152.1 78 84.6
Lsat_1_v5_gn_9_25321 Lactuca sativa HOM05D005372 ORTHO05D006593 3.1e-35 152.1 79 82.3
TWI75G1302 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 3.1e-35 152.1 78 84.6
BcaB05g22467 Brassica carinata HOM05D005372 ORTHO05D006593 4.1e-35 151.8 79 83.5
BcaB08g36298 Brassica carinata HOM05D005372 ORTHO05D006593 5.4e-35 151.4 79 83.5
HanXRQChr04g0109301 Helianthus annuus HOM05D005372 ORTHO05D006593 5.4e-35 151.4 79 81.0
Cpa.g.sc112.93 Carica papaya HOM05D005372 ORTHO05D006593 7.0e-35 151.0 79 81.0
Eucgr.J01954 Eucalyptus grandis HOM05D005372 ORTHO05D006593 7.0e-35 151.0 74 87.8
Cfa011626 Carpinus fangiana HOM05D005372 ORTHO05D006593 9.2e-35 150.6 128 79.7
Migut.K01340 Erythranthe guttata HOM05D005372 ORTHO05D006593 9.2e-35 150.6 79 82.3
FvH4_3g37450 Fragaria vesca HOM05D005372 ORTHO05D006593 1.2e-34 150.2 79 81.0
FAN11G0559 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.2e-34 150.2 79 81.0
MSTRG.14035 Avicennia marina HOM05D005372 ORTHO05D006593 1.6e-34 149.8 79 81.0
Gohir.D07G106400 Gossypium hirsutum HOM05D005372 ORTHO05D006593 1.6e-34 149.8 78 82.1
Thecc.09G309200 Theobroma cacao HOM05D005372 ORTHO05D006593 1.6e-34 149.8 78 79.5
FAN21G1258 Fragaria x ananassa HOM05D005372 ORTHO05D006593 2.0e-34 149.4 79 81.0
FAN25G0461 Fragaria x ananassa HOM05D005372 ORTHO05D006593 2.0e-34 149.4 79 81.0
PGR119G2477 Punica granatum HOM05D005372 ORTHO05D006593 2.0e-34 149.4 74 87.8
AL8G35370 Arabidopsis lyrata HOM05D005372 ORTHO05D006593 3.5e-34 148.7 79 83.5
AT5G52370 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 3.5e-34 148.7 79 83.5
AT5G58990 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 3.5e-34 148.7 79 83.5
CDE07G0920 Ceratophyllum demersum HOM05D005372 ORTHO05D006593 3.5e-34 148.7 78 80.8
Gohir.A07G102200 Gossypium hirsutum HOM05D005372 ORTHO05D006593 3.5e-34 148.7 78 80.8
Oeu017419.1 Olea europaea HOM05D005372 ORTHO05D006593 3.5e-34 148.7 78 83.3
Aqoxy1G00762 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 4.5e-34 148.3 139 69.8
BcaC03g14063 Brassica carinata HOM05D005372 ORTHO05D006593 4.5e-34 148.3 79 82.3
C02p12980 Brassica napus HOM05D005372 ORTHO05D006593 4.5e-34 148.3 79 82.3
C03p14010 Brassica napus HOM05D005372 ORTHO05D006593 4.5e-34 148.3 79 82.3
BolC3t13848H Brassica oleracea HOM05D005372 ORTHO05D006593 4.5e-34 148.3 79 82.3
BraA02t05820Z Brassica rapa HOM05D005372 ORTHO05D006593 4.5e-34 148.3 79 82.3
CANSAT54G2064 Cannabis sativa HOM05D005372 ORTHO05D006593 4.5e-34 148.3 74 85.1
Sp6g20690 Schrenkiella parvula HOM05D005372 ORTHO05D006593 4.5e-34 148.3 79 82.3
SGA_v2.0_scaffold35G14025 Striga asiatica HOM05D005372 ORTHO05D006593 4.5e-34 148.3 79 81.0
A02p07420 Brassica napus HOM05D005372 ORTHO05D006593 5.9e-34 147.9 79 81.0
SalBow4G1938 Salvia bowleyana HOM05D005372 ORTHO05D006593 5.9e-34 147.9 78 83.3
THA.LOC104799412 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 5.9e-34 147.9 74 85.1
Thhalv10014944m.g Eutrema salsugineum HOM05D005372 ORTHO05D006593 7.8e-34 147.5 79 82.3
CARHR285220 Cardamine hirsuta HOM05D005372 ORTHO05D006593 1.0e-33 147.1 74 86.5
Ciclev10029469m.g Citrus clementina HOM05D005372 ORTHO05D006593 1.0e-33 147.1 141 68.1
unitig_26.g9774 Utricularia gibba HOM05D005372 ORTHO05D006593 1.0e-33 147.1 79 81.0
Carub.0008s1963 Capsella rubella HOM05D005372 ORTHO05D006593 1.3e-33 146.7 74 86.5
Gorai.001G114500 Gossypium raimondii HOM05D005372 ORTHO05D006593 1.3e-33 146.7 78 80.8
Lalb_Chr14g0372091 Lupinus albus HOM05D005372 ORTHO05D006593 1.3e-33 146.7 74 83.8
THA.LOC104810736 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 1.7e-33 146.4 74 83.8
A03p11910 Brassica napus HOM05D005372 ORTHO05D006593 2.3e-33 146.0 79 81.0
BraA03t10503Z Brassica rapa HOM05D005372 ORTHO05D006593 2.3e-33 146.0 79 81.0
Cc01_g13660 Coffea canephora HOM05D005372 ORTHO05D006593 2.3e-33 146.0 79 82.3
Glyma.15G033200 Glycine max HOM05D005372 ORTHO05D006593 2.3e-33 146.0 74 86.5
Lalb_Chr24g0397111 Lupinus albus HOM05D005372 ORTHO05D006593 2.3e-33 146.0 74 83.8
VMungo1127G1276 Vigna mungo HOM05D005372 ORTHO05D006593 2.9e-33 145.6 74 82.4
Atru.chr3.4040 Acer truncatum HOM05D005372 ORTHO05D006593 3.8e-33 145.2 74 83.8
Glyma.13G341200 Glycine max HOM05D005372 ORTHO05D006593 5.0e-33 144.8 74 83.8
Nitab4.5_0000744g0090 Nicotiana tabacum HOM05D005372 ORTHO05D006593 5.0e-33 144.8 78 79.5
BcaB01g04621 Brassica carinata HOM05D005372 ORTHO05D006593 6.6e-33 144.4 79 81.0
Peaxi162Scf01058g00152 Petunia axillaris HOM05D005372 ORTHO05D006593 8.6e-33 144.1 78 79.5
Glyma.11G111000 Glycine max HOM05D005372 ORTHO05D006593 1.1e-32 143.7 74 82.4
Potri.009G040100 Populus trichocarpa HOM05D005372 ORTHO05D006593 1.1e-32 143.7 74 82.4
Nitab4.5_0002718g0040 Nicotiana tabacum HOM05D005372 ORTHO05D006593 1.5e-32 143.3 78 78.2
CAN.G394.95 Capsicum annuum HOM05D005372 ORTHO05D006593 1.9e-32 142.9 78 78.2
SGA_v2.0_scaffold8G04342 Striga asiatica HOM05D005372 ORTHO05D006593 1.9e-32 142.9 90 72.2
Phvul.011G206600 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 2.5e-32 142.5 74 81.1
Potri.001G246800 Populus trichocarpa HOM05D005372 ORTHO05D006593 2.5e-32 142.5 75 84.0
Sabra09G0028200 Salix brachista HOM05D005372 ORTHO05D006593 2.5e-32 142.5 74 81.1
Phvul.011G039001 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 3.3e-32 142.1 73 82.2
Actinidia08556 Actinidia chinensis HOM05D005372 ORTHO05D006593 4.3e-32 141.7 79 79.7
Manes.02G123700 Manihot esculenta HOM05D005372 ORTHO05D006593 4.3e-32 141.7 74 83.8
VMungo1127G1643 Vigna mungo HOM05D005372 ORTHO05D006593 4.3e-32 141.7 79 78.5
Aa31LG1G11690 Aethionema arabicum HOM05D005372 ORTHO05D006593 5.6e-32 141.4 81 76.5
Medtr2g097890 Medicago truncatula HOM05D005372 ORTHO05D006593 5.6e-32 141.4 74 79.7
TPR.G6862 Trifolium pratense HOM05D005372 ORTHO05D006593 5.6e-32 141.4 74 79.7
Actinidia25121 Actinidia chinensis HOM05D005372 ORTHO05D006593 9.5e-32 140.6 79 78.5
arahy.Tifrunner.gnm1.ann1.IGF4QT Arachis hypogaea HOM05D005372 ORTHO05D006593 1.2e-31 140.2 74 83.8
arahy.Tifrunner.gnm1.ann1.UR5XNC Arachis hypogaea HOM05D005372 ORTHO05D006593 1.2e-31 140.2 74 83.8
Solyc06g076620.3 Solanum lycopersicum HOM05D005372 ORTHO05D006593 1.2e-31 140.2 78 76.9
Sopen06g033010 Solanum pennellii HOM05D005372 ORTHO05D006593 1.2e-31 140.2 78 76.9
PGSC0003DMG400030429 Solanum tuberosum HOM05D005372 ORTHO05D006593 1.2e-31 140.2 78 76.9
Lj3g0018318 Lotus japonicus HOM05D005372 ORTHO05D006593 1.0e-30 137.1 74 81.1
Psat5g285800 Pisum sativum HOM05D005372 ORTHO05D006593 1.0e-30 137.1 74 77.0
CSS0039141 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 1.4e-30 136.7 140 60.7
CSS0037054 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 1.8e-30 136.3 141 61.0
AUR62001715 Chenopodium quinoa HOM05D005372 ORTHO05D006593 3.0e-30 135.6 78 75.6
FAN16G3555 Fragaria x ananassa HOM05D005372 ORTHO05D006593 4.0e-30 135.2 105 61.0
Lj6g0015977 Lotus japonicus HOM05D005372 ORTHO05D006593 5.2e-30 134.8 74 79.7
ClCG02G019810 Citrullus lanatus HOM05D005372 ORTHO05D006593 6.8e-30 134.4 73 78.1
Sed0010324 Sechium edule HOM05D005372 ORTHO05D006593 6.8e-30 134.4 73 78.1
Ah.13g070300 Amaranthus hybridus HOM05D005372 ORTHO05D006593 1.2e-29 133.7 78 75.6
MELO3C025881.2 Cucumis melo HOM05D005372 ORTHO05D006593 1.2e-29 133.7 73 76.7
CsaV3_6G016530 Cucumis sativus L. HOM05D005372 ORTHO05D006593 2.0e-29 132.9 73 76.7
Rhsim13G0075100 Rhododendron simsii HOM05D005372 ORTHO05D006593 2.0e-29 132.9 78 75.6
EL10Ac7g16097 Beta vulgaris HOM05D005372 ORTHO05D006593 3.4e-29 132.1 78 74.4
Hund04902 Selenicereus undatus HOM05D005372 ORTHO05D006593 3.4e-29 132.1 78 75.6
Dinv34320 Davidia involucrata HOM05D001226 ORTHO05D006593 1.7e-28 129.8 68 83.8
Os02g0481000 Oryza sativa ssp. japonica HOM05D005372 ORTHO05D006593 1.4e-27 126.7 78 69.2
Zm00001eb066290 Zea mays HOM05D005372 ORTHO05D006593 4.1e-27 125.2 78 67.9
Zm00001eb433670 Zea mays HOM05D005372 ORTHO05D006593 3.0e-25 119.0 82 64.6
SalBow6G3269 Salvia bowleyana HOM05D005372 ORTHO05D006593 8.6e-25 117.5 78 70.5
Sabra16G0149900 Salix brachista HOM05D005372 ORTHO05D006593 3.3e-24 115.5 74 71.6
Nn1g02876 Nelumbo nucifera HOM05D005372 ORTHO05D006593 9.5e-24 114.0 69 72.5
Lj4P191T41 Lonicera japonica HOM05D005372 ORTHO05D006593 6.2e-23 111.3 52 90.4
C09p51220 Brassica napus HOM05D005372 ORTHO05D006593 1.4e-22 110.2 79 65.8
Haze_24230 Corylus avellana HOM05D005372 ORTHO05D006593 1.4e-22 110.2 101 80.2
BolC2t07410H Brassica oleracea HOM05D005372 ORTHO05D006593 1.8e-22 109.8 89 61.8
DCAR_028257 Daucus carota HOM05D005372 ORTHO05D006593 2.3e-22 109.4 52 84.6
QL01p028939 Quercus lobata HOM05D005372 ORTHO05D006593 1.5e-21 106.7 51 86.3
ATR0618G182 Amborella trichopoda HOM05D005372 ORTHO05D006593 7.5e-21 104.4 51 88.2
Oeu002454.1 Olea europaea HOM05D005372 ORTHO05D006593 1.9e-19 99.8 62 71.0
AagrBONN_evm.TU.Sc2ySwM_228.2511 Anthoceros agrestis HOM05D005372 ORTHO05D006593 3.2e-19 99.0 74 58.1
Mapoly0002s0283 Marchantia polymorpha HOM05D005372 ORTHO05D006593 9.2e-19 97.4 79 54.4
Nitab4.5_0000933g0130 Nicotiana tabacum HOM05D005372 ORTHO05D006593 9.2e-19 97.4 103 48.5
Pp3c9_8860 Physcomitrium patens HOM05D005372 ORTHO05D006593 9.5e-16 87.4 74 51.4
BraA10t43707Z Brassica rapa HOM05D005372 ORTHO05D006593 1.2e-15 87.0 66 63.6
COL.COLO4_19070 Corchorus olitorius HOM05D005372 ORTHO05D006593 1.2e-15 87.0 47 80.9
SHI05895 Sapria himalayana HOM05D005372 ORTHO05D006593 8.1e-15 84.3 82 50.0
CBR_g8222 Chara braunii HOM05D005372 ORTHO05D006593 5.8e-13 78.2 77 46.8
Glyma.12G037300 Glycine max HOM05D005372 ORTHO05D006593 1.7e-12 76.6 42 76.2
SMO111G0201 Selaginella moellendorffii HOM05D005372 ORTHO05D006593 4.9e-12 75.1 83 43.4
Sc06g0008390 Simmondsia chinensis HOM05D005372 ORTHO05D006593 2.4e-11 72.8 37 78.4
vmacro03009 Vaccinium macrocarpon HOM05D005372 ORTHO05D006593 3.2e-11 72.4 48 68.8
Dinv20930 Davidia involucrata HOM05D005372 ORTHO05D006593 6.0e-10 68.2 44 65.9
MD06G1146500 Malus domestica HOM05D005372 ORTHO05D006593 7.8e-10 67.8 37 81.1
Dinv21014 Davidia involucrata HOM05D005372 ORTHO05D006593 1.3e-09 67.0 43 67.4
Zm00001eb217580 Zea mays HOM05D000360 ORTHO05D000234 2.8e-07 59.3 38 65.8
Zm00001eb023370 Zea mays HOM05D000798 ORTHO05D000659 1.1e-06 57.4 46 56.5


User provided reference genes

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