Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g25893_MAGBIO Magnolia biondii HOM05D013991 ORTHO05D009660 8.7e-108 393.7 200 100.0
TAR135G0002 Trochodendron aralioides HOM05D000004 ORTHO05D000002 5.8e-19 98.6 131 44.3
MBI18_g26690_MAGBIO Magnolia biondii HOM05D013991 ORTHO05D009660 2.9e-18 96.3 56 78.6
MBI02_g39882_MAGBIO Magnolia biondii HOM05D013991 ORTHO05D009660 8.6e-15 84.7 74 59.5
MBI03_g28299_MAGBIO Magnolia biondii HOM05D008755 ORTHO05D009660 1.6e-13 80.5 55 74.5
Dinv38966 Davidia involucrata HOM05D000151 ORTHO05D000074 4.7e-13 79.0 118 37.3
MBI10_g05543_MAGBIO Magnolia biondii HOM05D008755 ORTHO05D009660 4.7e-13 79.0 51 74.5
CSS0011613 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D009660 6.8e-12 75.1 50 72.0
SEGI_14471 Sequoiadendron giganteum HOM05D000603 ORTHO05D002962 6.8e-12 75.1 133 35.3
MBI11_g38641_MAGBIO Magnolia biondii HOM05D013991 ORTHO05D009660 3.4e-11 72.8 71 52.1
QL11p024776 Quercus lobata HOM05D000004 ORTHO05D000002 7.6e-11 71.6 135 33.3
QL09p008939 Quercus lobata HOM05D000004 ORTHO05D000002 1.3e-10 70.9 135 33.3
PSO675G7964 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-10 69.7 123 37.4
MBI04_g31874_MAGBIO Magnolia biondii HOM05D013991 ORTHO05D009660 6.4e-10 68.6 60 60.0
PSO170G4300 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-09 67.0 117 33.3
Actinidia10157 Actinidia chinensis HOM05D000124 ORTHO05D009660 4.1e-09 65.9 48 64.6
PGR102G0017 Punica granatum HOM05D000004 ORTHO05D000002 5.4e-09 65.5 120 35.0
MBI01_g03367_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D036564 7.1e-09 65.1 82 47.6
PSO339G5592 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-08 64.3 107 35.5
PSO170G1357 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-08 63.9 115 33.9
PSO675G1879 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-08 63.9 115 33.0
FvH4_4g12742 Fragaria vesca HOM05D000004 ORTHO05D000002 2.1e-08 63.5 116 33.6
PSO063G0930 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-08 63.2 119 32.8
PSO339G2721 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-08 63.2 115 34.8
MBI16_g13254_MAGBIO Magnolia biondii HOM05D028750 ORTHO05D011657 3.5e-08 62.8 84 44.0
PSO017G0752 Papaver somniferum HOM05D000004 ORTHO05D000002 3.5e-08 62.8 115 34.8
Prupe.7G034800 Prunus persica HOM05D000004 ORTHO05D000563 3.5e-08 62.8 49 59.2
PGR083G1481 Punica granatum HOM05D000004 ORTHO05D000002 3.5e-08 62.8 94 36.2
CiPaw.14G083400 Carya illinoinensis HOM05D000004 ORTHO05D000563 4.6e-08 62.4 116 34.5
MBI05_g17915_MAGBIO Magnolia biondii HOM05D008755 ORTHO05D009660 4.6e-08 62.4 36 77.8
PSO063G5223 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-08 62.4 149 30.9
CiPaw.05G240600 Carya illinoinensis HOM05D008382 ORTHO05D009660 6.0e-08 62.0 52 55.8
Hma1.2p1_0253F.1_g103130 Hydrangea macrophylla HOM05D000004 ORTHO05D000563 6.0e-08 62.0 119 30.3
PSO832G1458 Papaver somniferum HOM05D000004 ORTHO05D009660 6.0e-08 62.0 50 52.0
PGR119G2216 Punica granatum HOM05D000004 ORTHO05D000563 6.0e-08 62.0 120 34.2
ECA248G0299 Erigeron canadensis HOM05D000006 ORTHO05D000091 7.8e-08 61.6 134 29.1
TWI60G1627 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.8e-08 61.6 117 32.5
MBI07_g18720_MAGBIO Magnolia biondii HOM05D012868 ORTHO05D036564 1.0e-07 61.2 74 47.3
PSO170G4806 Papaver somniferum HOM05D000004 ORTHO05D000563 1.0e-07 61.2 115 34.8
FvH4_3g40201 Fragaria vesca HOM05D000004 ORTHO05D000002 1.3e-07 60.8 51 51.0
PGR083G2455 Punica granatum HOM05D000004 ORTHO05D000002 1.3e-07 60.8 115 34.8
Dinv17484 Davidia involucrata HOM05D000004 ORTHO05D000563 2.3e-07 60.1 51 56.9
ECA246G2152 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.3e-07 60.1 150 26.7
ECA246G2687 Erigeron canadensis HOM05D000321 ORTHO05D000002 2.3e-07 60.1 157 29.3
FvH4_2g02661 Fragaria vesca HOM05D008382 ORTHO05D009660 2.3e-07 60.1 33 84.8
PSO063G2046 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-07 60.1 115 32.2
Rhsim05G0179000 Rhododendron simsii HOM05D011528 ORTHO05D015218 2.3e-07 60.1 100 35.0
PSO017G7238 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-07 59.7 115 33.0
PSO356G0054 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-07 59.7 134 30.6
PSO675G2557 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-07 59.7 91 35.2
TPR.G4156 Trifolium pratense HOM05D000007 ORTHO05D000521 3.0e-07 59.7 190 26.3
Dinv06798 Davidia involucrata HOM05D000004 ORTHO05D000563 3.9e-07 59.3 50 56.0
PGR142G2802 Punica granatum HOM05D000004 ORTHO05D000002 3.9e-07 59.3 115 34.8
Atru.chr7.144 Acer truncatum HOM05D000004 ORTHO05D000563 5.1e-07 58.9 48 56.2
Hma1.2p1_2925F.1_g330460 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.1e-07 58.9 121 32.2
PSO339G1289 Papaver somniferum HOM05D000004 ORTHO05D000002 5.1e-07 58.9 91 36.3
Potri.001G006850 Populus trichocarpa HOM05D028484 ORTHO05D000563 5.1e-07 58.9 102 30.4
ECA246G4319 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.7e-07 58.2 133 30.8
PSO732G0311 Papaver somniferum HOM05D000004 ORTHO05D000002 8.7e-07 58.2 88 37.5
TWI77G0626 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 8.7e-07 58.2 50 54.0
PSO063G7224 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.8 115 33.0
PSO541G2140 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.8 107 35.5
PSO832G1137 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 57.4 101 34.7
PGR102G1257 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-06 57.4 49 57.1
RhsimUnG0084300 Rhododendron simsii HOM05D011528 ORTHO05D000563 1.5e-06 57.4 117 27.4
TPR.G29747 Trifolium pratense HOM05D000004 ORTHO05D000002 1.5e-06 57.4 187 25.7
PSO339G0871 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 57.0 115 33.9
PGR002G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.9e-06 57.0 49 57.1
FvH4_4g14286 Fragaria vesca HOM05D008382 ORTHO05D000563 2.5e-06 56.6 117 30.8
Medtr7g105270 Medicago truncatula HOM05D000004 ORTHO05D000002 2.5e-06 56.6 49 53.1
Sabra11G0010700 Salix brachista HOM05D000004 ORTHO05D009927 2.5e-06 56.6 49 57.1
Hund17465 Selenicereus undatus HOM05D008980 ORTHO05D016385 2.5e-06 56.6 49 53.1
Thecc.05G102300 Theobroma cacao HOM05D000004 ORTHO05D000563 2.5e-06 56.6 92 33.7
ECA238G1641 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.3e-06 56.2 139 26.6
Eucgr.L00350 Eucalyptus grandis HOM05D000018 ORTHO05D000453 3.3e-06 56.2 37 64.9
HanXRQChr07g0190251 Helianthus annuus HOM05D000004 ORTHO05D000002 3.3e-06 56.2 123 28.5
HanXRQChr10g0295121 Helianthus annuus HOM05D000004 ORTHO05D000002 3.3e-06 56.2 123 28.5
HanXRQChr13g0415051 Helianthus annuus HOM05D000004 ORTHO05D000002 3.3e-06 56.2 123 28.5
PSO063G2514 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-06 56.2 50 52.0
PSO339G3408 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-06 56.2 118 30.5
PSO541G3038 Papaver somniferum HOM05D000004 ORTHO05D000563 3.3e-06 56.2 149 29.5
PSO781G0082 Papaver somniferum HOM05D000004 ORTHO05D000002 3.3e-06 56.2 50 50.0
RcHm_v2.0_Chr3g0461881 Rosa chinensis HOM05D000004 ORTHO05D000002 3.3e-06 56.2 117 28.2
Hma1.2p1_0314F.1_g122100 Hydrangea macrophylla HOM05D000004 ORTHO05D009927 4.3e-06 55.8 115 33.0
Manes.16G058925 Manihot esculenta HOM05D000004 ORTHO05D000002 4.3e-06 55.8 51 49.0
ECA240G1927 Erigeron canadensis HOM05D000145 ORTHO05D000115 5.6e-06 55.5 156 28.2
Medtr7g056297 Medicago truncatula HOM05D000004 ORTHO05D000002 5.6e-06 55.5 49 51.0
PGR083G2793 Punica granatum HOM05D000004 ORTHO05D000002 5.6e-06 55.5 49 57.1
Rhsim08G0028500 Rhododendron simsii HOM05D000302 ORTHO05D001604 5.6e-06 55.5 50 48.0
ECA240G4601 Erigeron canadensis HOM05D000004 ORTHO05D000002 7.3e-06 55.1 139 26.6
HanXRQChr16g0519861 Helianthus annuus HOM05D000004 ORTHO05D000002 7.3e-06 55.1 123 27.6
Medtr1361s0010 Medicago truncatula HOM05D000004 ORTHO05D000002 7.3e-06 55.1 49 49.0
PSO832G2392 Papaver somniferum HOM05D000004 ORTHO05D000002 7.3e-06 55.1 114 33.3
Hund23938 Selenicereus undatus HOM05D000004 ORTHO05D000563 7.3e-06 55.1 49 51.0
ECA238G2710 Erigeron canadensis HOM05D000004 ORTHO05D000002 9.6e-06 54.7 49 55.1
PSO591G0211 Papaver somniferum HOM05D000004 ORTHO05D000002 9.6e-06 54.7 107 33.6
PGR031G2743 Punica granatum HOM05D000004 ORTHO05D000002 9.6e-06 54.7 95 32.6
Hund20088 Selenicereus undatus HOM05D000004 ORTHO05D000563 9.6e-06 54.7 49 53.1


User provided reference genes

Program Settings