Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g21902_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.4e-52 209.5 118 100.0
MBI14_g17952_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.7e-26 122.9 121 68.6
Dinv03824 Davidia involucrata HOM05D000913 ORTHO05D000687 6.2e-13 77.8 97 48.5
MBI15_g37255_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.8e-12 76.3 100 49.0
Gohir.D05G386200 Gossypium hirsutum HOM05D000913 ORTHO05D000687 6.4e-10 67.8 122 43.4
Haze_09888 Corylus avellana HOM05D000913 ORTHO05D000687 8.4e-10 67.4 83 45.8
MBI16_g31488_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.4e-09 66.6 95 54.7
TAR629G0096 Trochodendron aralioides HOM05D000913 ORTHO05D000687 1.4e-09 66.6 97 41.2
Nn1g07601 Nelumbo nucifera HOM05D000913 ORTHO05D000687 3.2e-09 65.5 50 62.0
Cpa.g.sc12.95 Carica papaya HOM05D000913 ORTHO05D000687 4.2e-09 65.1 98 38.8
QL08p002242 Quercus lobata HOM05D000913 ORTHO05D000687 9.3e-09 63.9 95 41.1
Gohir.A04G003700 Gossypium hirsutum HOM05D000913 ORTHO05D000687 1.6e-08 63.2 104 35.6
arahy.Tifrunner.gnm1.ann1.IGM1GX Arachis hypogaea HOM05D000913 ORTHO05D000687 2.1e-08 62.8 45 71.1
QL08p002295 Quercus lobata HOM05D000913 ORTHO05D000687 2.1e-08 62.8 96 39.6
TAR629G2544 Trochodendron aralioides HOM05D000913 ORTHO05D000687 2.1e-08 62.8 97 42.3
arahy.Tifrunner.gnm1.ann1.RGK4QC Arachis hypogaea HOM05D000913 ORTHO05D000687 6.0e-08 61.2 45 71.1
Sabra16G0317700 Salix brachista HOM05D000913 ORTHO05D000687 6.0e-08 61.2 97 48.5
Dinv16085 Davidia involucrata HOM05D000913 ORTHO05D000687 1.0e-07 60.5 51 62.7
QL08p002232 Quercus lobata HOM05D000913 ORTHO05D000687 1.0e-07 60.5 95 37.9
QL08p002253 Quercus lobata HOM05D000913 ORTHO05D000687 1.0e-07 60.5 99 44.4
ATR0751G174 Amborella trichopoda HOM05D000913 ORTHO05D000687 1.3e-07 60.1 95 38.9
GSVIVG01014802001 Vitis vinifera HOM05D000913 ORTHO05D000687 1.8e-07 59.7 51 58.8
Haze_09880 Corylus avellana HOM05D000913 ORTHO05D000687 3.0e-07 58.9 97 37.1
MBI14_g42478_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 3.9e-07 58.5 50 56.0
Manes.11G055424 Manihot esculenta HOM05D000913 ORTHO05D000687 3.9e-07 58.5 95 38.9
PSO017G4708 Papaver somniferum HOM05D000913 ORTHO05D000687 3.9e-07 58.5 103 50.5
Hma1.2p1_0193F.1_g084060 Hydrangea macrophylla HOM05D000913 ORTHO05D000687 5.1e-07 58.2 88 45.5
Dinv03822 Davidia involucrata HOM05D000913 ORTHO05D000687 6.7e-07 57.8 76 44.7
MBI14_g16765_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 6.7e-07 57.8 95 36.8
MBI14_g44232_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 6.7e-07 57.8 50 56.0
vmacro11625 Vaccinium macrocarpon HOM05D000913 ORTHO05D000687 6.7e-07 57.8 100 42.0
GSVIVG01014795001 Vitis vinifera HOM05D000913 ORTHO05D000687 1.1e-06 57.0 48 60.4
Gohir.A04G003600 Gossypium hirsutum HOM05D000913 ORTHO05D000687 1.5e-06 56.6 104 44.2
Manes.11G060239 Manihot esculenta HOM05D000913 ORTHO05D000687 1.5e-06 56.6 99 42.4
PSO573G0012 Papaver somniferum HOM05D000913 ORTHO05D000687 1.9e-06 56.2 109 47.7
QL08p002290 Quercus lobata HOM05D000913 ORTHO05D000687 1.9e-06 56.2 99 42.4
Ciclev10010297m.g Citrus clementina HOM05D000913 ORTHO05D000687 2.5e-06 55.8 48 60.4
GSVIVG01014798001 Vitis vinifera HOM05D000913 ORTHO05D000687 2.5e-06 55.8 48 58.3
CiPaw.11G208300 Carya illinoinensis HOM05D000913 ORTHO05D000687 3.3e-06 55.5 47 59.6
MBI14_g16770_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 3.3e-06 55.5 49 51.0
MBI14_g43020_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 3.3e-06 55.5 49 51.0
QL05p066526 Quercus lobata HOM05D000913 ORTHO05D000687 3.3e-06 55.5 43 65.1
CSS0028038 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 4.3e-06 55.1 47 53.2
Gorai.009G452700 Gossypium raimondii HOM05D000913 ORTHO05D000687 4.3e-06 55.1 110 40.9
Medtr3g082210 Medicago truncatula HOM05D000913 ORTHO05D000687 4.3e-06 55.1 96 39.6
QL05p066534 Quercus lobata HOM05D000913 ORTHO05D000687 4.3e-06 55.1 67 50.7
Sabra16G0317800 Salix brachista HOM05D000913 ORTHO05D000687 4.3e-06 55.1 96 35.4
Hund25407 Selenicereus undatus HOM05D000913 ORTHO05D000687 4.3e-06 55.1 52 55.8
CiPaw.11G201200 Carya illinoinensis HOM05D000913 ORTHO05D000687 5.6e-06 54.7 74 43.2
CARHR095770 Cardamine hirsuta HOM05D000913 ORTHO05D000687 7.4e-06 54.3 89 39.3
MBI14_g16762_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 7.4e-06 54.3 90 35.6
MBI14_g16764_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 7.4e-06 54.3 95 34.7
Hund29698 Selenicereus undatus HOM05D000913 ORTHO05D000687 7.4e-06 54.3 46 56.5
Hund29699 Selenicereus undatus HOM05D000913 ORTHO05D000687 7.4e-06 54.3 46 56.5
MBI16_g33216_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 9.6e-06 53.9 48 60.4
Manes.03G137300 Manihot esculenta HOM05D000913 ORTHO05D000687 9.6e-06 53.9 99 40.4
QL05p066543 Quercus lobata HOM05D000913 ORTHO05D000687 9.6e-06 53.9 71 47.9


User provided reference genes

Program Settings