Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g16440_MAGBIO Magnolia biondii HOM05D006171 ORTHO05D007294 3.1e-182 641.7 337 100.0
Potri.003G185754 Populus trichocarpa HOM05D006171 ORTHO05D007294 6.8e-121 438.0 252 83.3
Potri.003G185501 Populus trichocarpa HOM05D006171 ORTHO05D007294 1.5e-120 436.8 252 82.9
Potri.003G185901 Populus trichocarpa HOM05D006171 ORTHO05D007294 7.5e-120 434.5 252 82.5
Potri.001G040100 Populus trichocarpa HOM05D006171 ORTHO05D007294 2.2e-119 433.0 252 81.0
Cfa001846 Carpinus fangiana HOM05D006171 ORTHO05D007294 2.8e-119 432.6 252 80.2
Rhsim12G0183500 Rhododendron simsii HOM05D006171 ORTHO05D007294 8.3e-119 431.0 252 81.3
TAR626G1848 Trochodendron aralioides HOM05D006171 ORTHO05D007294 8.3e-119 431.0 252 82.1
Lj5C82T4 Lonicera japonica HOM05D006171 ORTHO05D007294 1.1e-118 430.6 251 82.1
Sabra03G0135700 Salix brachista HOM05D006171 ORTHO05D007294 1.1e-118 430.6 259 81.1
CiPaw.01G256900 Carya illinoinensis HOM05D006171 ORTHO05D007294 4.1e-118 428.7 252 79.8
THA.LOC104812426 Tarenaya hassleriana HOM05D006171 ORTHO05D007294 4.1e-118 428.7 252 81.3
Manes.11G069800 Manihot esculenta HOM05D006171 ORTHO05D007294 5.4e-118 428.3 252 80.2
CAN.G1008.12 Capsicum annuum HOM05D006171 ORTHO05D007294 2.0e-117 426.4 251 80.5
Nitab4.5_0002700g0080 Nicotiana tabacum HOM05D006171 ORTHO05D007294 2.7e-117 426.0 252 80.2
Peaxi162Scf00314g01040 Petunia axillaris HOM05D006171 ORTHO05D007294 3.5e-117 425.6 291 71.1
PGR102G1595 Punica granatum HOM05D006171 ORTHO05D007294 4.5e-117 425.2 252 79.4
Solyc03g117740.3 Solanum lycopersicum HOM05D006171 ORTHO05D007294 4.5e-117 425.2 252 80.2
Sopen03g036650 Solanum pennellii HOM05D006171 ORTHO05D007294 7.7e-117 424.5 252 80.2
Thecc.06G048100 Theobroma cacao HOM05D006171 ORTHO05D007294 7.7e-117 424.5 252 79.8
COL.COLO4_26789 Corchorus olitorius HOM05D006171 ORTHO05D007294 1.7e-116 423.3 252 79.8
Gohir.D05G117900 Gossypium hirsutum HOM05D006171 ORTHO05D007294 1.7e-116 423.3 252 79.0
PGSC0003DMG400014158 Solanum tuberosum HOM05D006171 ORTHO05D007294 1.7e-116 423.3 252 79.4
vmacro16838 Vaccinium macrocarpon HOM05D006171 ORTHO05D007294 1.7e-116 423.3 251 80.9
Cpa.g.sc95.67 Carica papaya HOM05D006171 ORTHO05D007294 2.9e-116 422.5 252 80.2
Ah.09g231760 Amaranthus hybridus HOM05D006171 ORTHO05D007294 5.0e-116 421.8 252 79.4
Aqoxy7G02339 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 5.0e-116 421.8 252 79.8
CSS0034221 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 5.0e-116 421.8 252 81.3
CDE07G0158 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 5.0e-116 421.8 252 78.2
TWI12G1342 Tripterygium wilfordii HOM05D006171 ORTHO05D007294 5.0e-116 421.8 252 78.2
A06p12100 Brassica napus HOM05D006171 ORTHO05D007294 1.1e-115 420.6 252 80.2
Duzib235G0222 Durio zibethinus HOM05D006171 ORTHO05D007294 1.1e-115 420.6 252 79.4
Thhalv10008259m.g Eutrema salsugineum HOM05D006171 ORTHO05D007294 1.1e-115 420.6 252 79.4
Sc10g0006500 Simmondsia chinensis HOM05D006171 ORTHO05D007294 1.1e-115 420.6 252 79.0
BraA06t24379Z Brassica rapa HOM05D006171 ORTHO05D007294 1.5e-115 420.2 252 80.2
Ciclev10025944m.g Citrus clementina HOM05D006171 ORTHO05D007294 1.5e-115 420.2 252 79.4
Sp1g14390 Schrenkiella parvula HOM05D006171 ORTHO05D007294 1.5e-115 420.2 252 79.4
CsaV3_7G031750 Cucumis sativus L. HOM05D006171 ORTHO05D007294 1.9e-115 419.9 252 79.0
SalBow1G2136 Salvia bowleyana HOM05D006171 ORTHO05D007294 1.9e-115 419.9 252 79.8
Hund22405 Selenicereus undatus HOM05D006171 ORTHO05D007294 2.5e-115 419.5 253 80.2
AL1G28240 Arabidopsis lyrata HOM05D006171 ORTHO05D007294 3.3e-115 419.1 252 78.6
FAN14G3270 Fragaria x ananassa HOM05D006171 ORTHO05D007294 3.3e-115 419.1 252 78.6
Actinidia36860 Actinidia chinensis HOM05D006171 ORTHO05D007294 4.2e-115 418.7 253 79.1
MELO3C023482.2 Cucumis melo HOM05D006171 ORTHO05D007294 4.2e-115 418.7 252 78.6
A09p61030 Brassica napus HOM05D000031 ORTHO05D007294 5.6e-115 418.3 251 78.5
BraA09t41476Z Brassica rapa HOM05D000031 ORTHO05D007294 5.6e-115 418.3 251 78.5
Prupe.3G104600 Prunus persica HOM05D006171 ORTHO05D007294 5.6e-115 418.3 252 79.0
GSVIVG01016093001 Vitis vinifera HOM05D006171 ORTHO05D007294 7.2e-115 417.9 243 81.5
AT1G16080 Arabidopsis thaliana HOM05D006171 ORTHO05D007294 9.5e-115 417.5 252 78.2
Carub.0001s1588 Capsella rubella HOM05D006171 ORTHO05D007294 9.5e-115 417.5 252 78.2
ClCG09G003450 Citrullus lanatus HOM05D006171 ORTHO05D007294 9.5e-115 417.5 252 77.8
Eucgr.F03988 Eucalyptus grandis HOM05D006171 ORTHO05D007294 9.5e-115 417.5 252 78.6
FvH4_6g28180 Fragaria vesca HOM05D006171 ORTHO05D007294 9.5e-115 417.5 252 78.2
BcaB02g06590 Brassica carinata HOM05D006171 ORTHO05D007294 1.6e-114 416.8 252 79.4
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 1.6e-114 416.8 251 78.1
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 1.6e-114 416.8 251 78.1
FAN09G0753 Fragaria x ananassa HOM05D006171 ORTHO05D007294 1.6e-114 416.8 252 78.2
Nn2g12468 Nelumbo nucifera HOM05D006171 ORTHO05D007294 2.1e-114 416.4 252 79.4
RcHm_v2.0_Chr2g0132161 Rosa chinensis HOM05D006171 ORTHO05D007294 2.1e-114 416.4 252 77.8
Migut.D01148 Erythranthe guttata HOM05D006171 ORTHO05D007294 6.1e-114 414.8 252 78.2
MD09G1228700 Malus domestica HOM05D006171 ORTHO05D007294 6.1e-114 414.8 252 78.6
SGA_v2.0_scaffold74G24604 Striga asiatica HOM05D006171 ORTHO05D007294 6.1e-114 414.8 252 79.4
BcaC05g25605 Brassica carinata HOM05D006171 ORTHO05D007294 8.0e-114 414.5 252 78.6
BolC5t30159H Brassica oleracea HOM05D006171 ORTHO05D007294 8.0e-114 414.5 252 78.6
Lsat_1_v5_gn_4_84921 Lactuca sativa HOM05D006171 ORTHO05D007294 8.0e-114 414.5 251 78.5
Oeu003115.1 Olea europaea HOM05D006171 ORTHO05D007294 8.0e-114 414.5 243 80.2
Oeu003116.1 Olea europaea HOM05D006171 ORTHO05D007294 8.0e-114 414.5 243 80.2
Atru.chr1.2816 Acer truncatum HOM05D006171 ORTHO05D007294 1.0e-113 414.1 253 78.3
AUR62002650 Chenopodium quinoa HOM05D006171 ORTHO05D007294 3.0e-113 412.5 251 77.7
Nitab4.5_0004738g0050 Nicotiana tabacum HOM05D006171 ORTHO05D007294 3.0e-113 412.5 284 72.5
ECA232G3902 Erigeron canadensis HOM05D006171 ORTHO05D007294 6.8e-113 411.4 251 78.1
HPP92_021945 Vanilla planifolia HOM05D006171 ORTHO05D007294 6.8e-113 411.4 252 77.4
unitig_62.g23820 Utricularia gibba HOM05D006171 ORTHO05D007294 1.2e-112 410.6 252 77.0
MSTRG.9390 Avicennia marina HOM05D006171 ORTHO05D007294 1.5e-112 410.2 307 67.4
Zm00001eb177930 Zea mays HOM05D006171 ORTHO05D007294 3.4e-112 409.1 253 77.9
C05p14280 Brassica napus HOM05D006171 ORTHO05D007294 4.4e-112 408.7 252 78.2
Potri.001G041140 Populus trichocarpa HOM05D006171 ORTHO05D007294 4.4e-112 408.7 252 78.2
Lalb_Chr25g0278721 Lupinus albus HOM05D006171 ORTHO05D007294 7.5e-112 407.9 252 77.8
BcaB03g14506 Brassica carinata HOM05D000031 ORTHO05D007294 1.7e-111 406.8 252 76.6
Lj3g0005429 Lotus japonicus HOM05D006171 ORTHO05D007294 2.2e-111 406.4 294 67.3
Medtr4g007910 Medicago truncatula HOM05D006171 ORTHO05D007294 2.9e-111 406.0 252 75.8
Glyma.08G220900 Glycine max HOM05D006171 ORTHO05D007294 6.4e-111 404.8 252 74.6
Cc04_g05360 Coffea canephora HOM05D006171 ORTHO05D007294 1.1e-110 404.1 243 79.0
HanXRQChr16g0499501 Helianthus annuus HOM05D006171 ORTHO05D007294 1.1e-110 404.1 251 76.9
Glyma.07G020900 Glycine max HOM05D006171 ORTHO05D007294 1.4e-110 403.7 252 75.0
arahy.Tifrunner.gnm1.ann1.B85C5A Arachis hypogaea HOM05D006171 ORTHO05D007294 3.2e-110 402.5 252 75.0
VMungo0647G1588 Vigna mungo HOM05D006171 ORTHO05D007294 3.2e-110 402.5 252 75.0
Aa31LG7G650 Aethionema arabicum HOM05D006171 ORTHO05D007294 4.1e-110 402.1 252 75.8
arahy.Tifrunner.gnm1.ann1.F1WQ27 Arachis hypogaea HOM05D006171 ORTHO05D007294 4.1e-110 402.1 252 75.0
Psat7g260440 Pisum sativum HOM05D006171 ORTHO05D007294 4.1e-110 402.1 252 76.6
Phvul.008G253700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 9.2e-110 401.0 252 74.2
VMungo1309G0227 Vigna mungo HOM05D006171 ORTHO05D007294 2.0e-109 399.8 252 73.4
AUR62034059 Chenopodium quinoa HOM05D006171 ORTHO05D007294 5.0e-108 395.2 295 66.4
Phvul.009G155700 Phaseolus vulgaris HOM05D006171 ORTHO05D007294 6.6e-108 394.8 252 71.8
CSS0033272 Camellia sinensis var. sinensis HOM05D006171 ORTHO05D007294 2.1e-106 389.8 247 77.3
Pp3c1_40240 Physcomitrium patens HOM05D006171 ORTHO05D007294 2.3e-97 359.8 251 67.3
EL10Ac8g19420 Beta vulgaris HOM05D006171 ORTHO05D007294 8.3e-95 351.3 251 69.3
CBR_g3722 Chara braunii HOM05D006171 ORTHO05D007294 1.1e-94 350.9 252 66.7
Gorai.009G121800 Gossypium raimondii HOM05D006171 ORTHO05D007294 3.5e-93 345.9 216 77.3
SMO356G0223 Selaginella moellendorffii HOM05D006171 ORTHO05D007294 6.0e-93 345.1 252 63.9
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 6.6e-92 341.7 247 65.6
Mapoly0047s0137 Marchantia polymorpha HOM05D006171 ORTHO05D007294 3.6e-90 335.9 251 62.5
Os08g0266300 Oryza sativa ssp. japonica HOM05D006171 ORTHO05D007294 4.0e-89 332.4 215 77.7
CANSAT64G1829 Cannabis sativa HOM05D006171 ORTHO05D007294 7.6e-88 328.2 192 80.2
HanXRQChr16g0499491 Helianthus annuus HOM05D006171 ORTHO05D007294 2.2e-87 326.6 252 61.1
ATR0580G215 Amborella trichopoda HOM05D006171 ORTHO05D007294 5.4e-86 322.0 190 80.0
PSO017G5952 Papaver somniferum HOM05D006171 ORTHO05D007294 5.4e-86 322.0 192 79.2
PSO170G6342 Papaver somniferum HOM05D006171 ORTHO05D007294 2.1e-85 320.1 192 78.6
MD17G1227100 Malus domestica HOM05D006171 ORTHO05D007294 3.9e-84 315.8 190 79.5
FAN05G3051 Fragaria x ananassa HOM05D006171 ORTHO05D007294 2.5e-83 313.2 227 69.6
Dinv21434 Davidia involucrata HOM05D006171 ORTHO05D007294 2.1e-82 310.1 185 82.2
PRCOL_00006061 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 4.6e-77 292.4 243 59.3
Cre10.g435850 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 6.0e-77 292.0 252 59.1
QL05p037111 Quercus lobata HOM05D006171 ORTHO05D007294 6.6e-76 288.5 168 80.4
Gohir.A05G117000 Gossypium hirsutum HOM05D006171 ORTHO05D007294 1.1e-75 287.7 168 78.6
MCO15G666 Micromonas commoda HOM05D006171 ORTHO05D007294 7.3e-75 285.0 254 56.3
AagrBONN_evm.TU.Sc2ySwM_344.694 Anthoceros agrestis HOM05D006171 ORTHO05D007294 1.1e-73 281.2 214 65.4
Hma1.2p1_2173F.1_g316040 Hydrangea macrophylla HOM05D006171 ORTHO05D007294 1.2e-64 251.1 198 66.2
RcHm_v2.0_Chr2g0132191 Rosa chinensis HOM05D006171 ORTHO05D007294 5.6e-59 232.3 185 63.2
Aqoxy6G02563 Aquilegia oxysepala HOM05D006171 ORTHO05D007294 2.8e-58 229.9 246 50.8
Rhsim12G0183600 Rhododendron simsii HOM05D006171 ORTHO05D007294 1.3e-55 221.1 259 49.4
Sed0008158 Sechium edule HOM05D006171 ORTHO05D007294 2.1e-53 213.8 127 77.2
CDE04G3654 Ceratophyllum demersum HOM05D006171 ORTHO05D007294 9.1e-33 145.2 110 61.8
QL05p037113 Quercus lobata HOM05D006171 ORTHO05D007294 2.0e-32 144.1 78 82.1
AagrBONN_evm.TU.Sc2ySwM_344.1199 Anthoceros agrestis HOM05D006171 ORTHO05D007294 1.0e-28 131.7 267 35.2
SEGI_00638 Sequoiadendron giganteum HOM05D006171 ORTHO05D007294 2.7e-21 107.1 65 73.8
PRCOL_00003410 Prasinoderma coloniale HOM05D006171 ORTHO05D007294 4.0e-20 103.2 270 34.1
Cre03.g167050 Chlamydomonas reinhardtii HOM05D006171 ORTHO05D007294 3.8e-15 86.7 317 27.1
RcHm_v2.0_Chr2g0132221 Rosa chinensis HOM05D006171 ORTHO05D007294 1.2e-13 81.6 53 66.0
arahy.Tifrunner.gnm1.ann1.VYJR5C Arachis hypogaea HOM05D006171 ORTHO05D007294 6.8e-12 75.9 103 50.5
Nn5g31109 Nelumbo nucifera HOM05D006171 ORTHO05D007294 5.7e-11 72.8 107 42.1


User provided reference genes

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