Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 1.3e-76 289.7 148 100.0
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 2.0e-64 249.2 146 84.9
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 3.3e-64 248.4 146 84.2
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 5.7e-64 247.7 146 84.2
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 5.7e-64 247.7 146 84.9
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 9.7e-64 246.9 146 84.9
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 1.3e-63 246.5 146 84.2
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 1.3e-63 246.5 146 84.2
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 2.8e-63 245.4 146 82.9
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 2.8e-63 245.4 146 82.9
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 4.8e-63 244.6 146 81.5
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 8.2e-63 243.8 146 82.9
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 8.2e-63 243.8 146 82.2
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 1.4e-62 243.0 146 82.2
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 1.4e-62 243.0 146 82.2
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.4e-62 242.3 146 83.6
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 4.1e-62 241.5 146 81.5
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 1.2e-61 240.0 146 82.9
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 1.6e-61 239.6 146 82.2
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 1.6e-61 239.6 146 82.2
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 2.0e-61 239.2 146 82.9
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 5.9e-61 237.7 145 82.1
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 7.7e-61 237.3 146 79.5
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 1.3e-60 236.5 146 80.1
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 1.7e-60 236.1 146 81.5
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 2.2e-60 235.7 146 79.5
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 2.9e-60 235.3 146 80.1
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 5.0e-60 234.6 146 80.8
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 8.5e-60 233.8 146 80.1
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 1.5e-59 233.0 146 78.8
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 3.2e-59 231.9 146 78.1
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 3.2e-59 231.9 147 79.6
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 9.4e-59 230.3 146 77.4
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 9.4e-59 230.3 149 78.5
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 1.2e-58 229.9 147 76.9
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 2.1e-58 229.2 146 76.7
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 2.1e-58 229.2 146 79.5
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 2.1e-58 229.2 146 77.4
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 6.1e-58 227.6 146 77.4
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.8e-57 226.1 146 77.4
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 1.8e-57 226.1 145 75.9
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 3.0e-57 225.3 146 78.1
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 3.0e-57 225.3 143 79.0
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 3.0e-57 225.3 146 77.4
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 4.0e-57 224.9 146 76.7
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 5.2e-57 224.6 146 74.0
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 5.2e-57 224.6 146 77.4
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 6.7e-57 224.2 146 76.0
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 8.8e-57 223.8 146 75.3
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 1.2e-56 223.4 146 76.0
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 1.5e-56 223.0 146 75.3
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 1.5e-56 223.0 146 76.0
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 1.5e-56 223.0 146 76.7
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 2.6e-56 222.2 145 74.5
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 2.6e-56 222.2 146 74.7
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 3.3e-56 221.9 146 73.3
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 3.3e-56 221.9 146 73.3
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 3.3e-56 221.9 146 73.3
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 3.3e-56 221.9 146 73.3
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 4.4e-56 221.5 145 73.8
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 4.4e-56 221.5 146 73.3
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 7.5e-56 220.7 146 76.0
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 7.5e-56 220.7 146 75.3
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 9.7e-56 220.3 146 72.6
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 4.8e-55 218.0 170 68.8
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 4.8e-55 218.0 146 73.3
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 8.2e-55 217.2 145 73.8
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 1.1e-54 216.9 145 74.5
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 1.4e-54 216.5 146 72.6
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 1.4e-54 216.5 166 68.7
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 1.8e-54 216.1 146 71.9
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 2.4e-54 215.7 146 71.9
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 2.4e-54 215.7 146 69.9
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 3.1e-54 215.3 145 72.4
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 7.0e-54 214.2 146 73.3
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 1.2e-53 213.4 146 72.6
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 2.7e-53 212.2 147 74.8
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 5.9e-53 211.1 145 71.0
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 7.7e-53 210.7 143 73.4
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 7.7e-53 210.7 146 72.6
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 2.2e-52 209.1 146 69.2
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 2.9e-52 208.8 145 69.0
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 1.9e-51 206.1 143 72.7
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 3.2e-51 205.3 146 69.9
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 4.2e-51 204.9 136 71.3
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 9.4e-51 203.8 146 69.9
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 1.6e-50 203.0 136 70.6
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 2.1e-50 202.6 128 77.3
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 4.7e-50 201.4 146 68.5
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 4.0e-49 198.4 146 68.5
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 4.4e-48 194.9 115 78.3
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 9.8e-48 193.7 146 67.1
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 1.7e-47 193.0 146 69.2
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 2.8e-47 192.2 145 66.9
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 3.7e-47 191.8 146 67.1
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 6.3e-47 191.0 146 67.8
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 1.1e-46 190.3 146 67.1
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 1.1e-46 190.3 146 67.1
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 1.8e-46 189.5 146 66.4
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 3.1e-46 188.7 145 65.5
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 5.4e-46 188.0 146 66.4
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 5.4e-46 188.0 148 64.2
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 7.0e-46 187.6 147 64.6
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 1.2e-45 186.8 145 66.9
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 2.0e-45 186.0 123 69.1
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 6.5e-44 181.0 144 63.9
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 8.6e-44 180.6 144 63.9
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 2.5e-43 179.1 146 63.7
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 4.2e-43 178.3 146 63.0
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 4.2e-43 178.3 145 64.1
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 1.0e-41 173.7 146 63.0
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 1.0e-41 173.7 146 62.3
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 2.0e-40 169.5 146 61.0
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 4.4e-40 168.3 147 59.9
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 4.4e-40 168.3 94 83.0
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 8.3e-39 164.1 99 72.7
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 1.1e-38 163.7 143 58.7
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 4.5e-37 158.3 94 79.8
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 5.9e-37 157.9 148 58.1
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 8.0e-34 147.5 143 51.7
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 1.3e-31 140.2 147 51.7
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 8.3e-31 137.5 154 50.0
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 7.0e-30 134.4 145 53.1
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 1.1e-27 127.1 82 70.7
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 1.1e-27 127.1 144 43.8
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 2.1e-26 122.9 127 55.9
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 1.1e-25 120.6 67 80.6
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 1.2e-24 117.1 66 75.8
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 1.3e-23 113.6 119 55.5
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 2.9e-23 112.5 66 71.2
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 3.7e-23 112.1 67 76.1
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 8.3e-23 110.9 65 73.8
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 9.5e-19 97.4 141 37.6
MELO3C020438.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.1e-18 96.3 55 76.4
unitig_62.g23488 Utricularia gibba HOM05D005031 ORTHO05D006098 2.1e-18 96.3 85 60.0
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.3e-17 92.8 53 77.4
MELO3C032992.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.7e-15 86.7 48 79.2
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 2.2e-15 86.3 68 50.0
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 3.9e-12 75.5 93 47.3
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.5e-11 73.6 38 81.6
PRCOL_00004780 Prasinoderma coloniale HOM05D005031 ORTHO05D006098 4.4e-08 62.0 145 27.6
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 5.8e-08 61.6 147 32.7
CARHR184590 Cardamine hirsuta HOM05D005031 ORTHO05D006098 1.4e-06 57.0 48 54.2


User provided reference genes

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