Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 3.7e-160 568.2 286 100.0
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 7.5e-113 411.0 274 78.1
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 9.5e-108 394.0 271 73.8
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 2.3e-106 389.4 271 71.6
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 4.0e-106 388.7 289 67.8
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 5.8e-105 384.8 249 75.5
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 1.7e-104 383.3 275 70.2
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 2.4e-103 379.4 267 71.9
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 3.2e-103 379.0 292 65.8
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 1.2e-102 377.1 271 70.5
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 2.1e-102 376.3 271 70.1
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 2.1e-102 376.3 270 68.1
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 2.1e-102 376.3 271 71.2
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 3.5e-102 375.6 275 67.6
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 4.6e-102 375.2 271 67.5
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 3.0e-101 372.5 275 67.6
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 1.9e-100 369.8 270 67.8
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.2e-99 367.1 267 67.4
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 1.2e-99 367.1 272 69.1
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 1.6e-99 366.7 271 66.8
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 1.6e-99 366.7 271 67.9
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 1.6e-99 366.7 272 66.9
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 6.2e-99 364.8 273 68.5
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 1.1e-98 364.0 247 72.9
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 1.4e-98 363.6 281 66.5
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 3.1e-98 362.5 276 66.3
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 4.0e-98 362.1 274 65.0
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 5.2e-98 361.7 275 66.9
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 1.2e-97 360.5 273 69.2
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 1.5e-97 360.1 269 67.3
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.5e-97 360.1 269 67.3
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 3.4e-97 359.0 301 62.8
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 4.4e-97 358.6 262 66.8
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 4.4e-97 358.6 269 66.5
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 5.8e-97 358.2 272 66.5
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.3e-96 357.1 263 66.5
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 2.2e-96 356.3 280 63.9
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 2.9e-96 355.9 275 65.8
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 4.9e-96 355.1 311 62.7
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 4.9e-96 355.1 271 66.1
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 1.4e-95 353.6 269 65.1
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 3.2e-95 352.4 276 65.2
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 4.1e-95 352.1 271 65.7
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 4.1e-95 352.1 271 64.9
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 5.4e-95 351.7 266 65.0
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 9.2e-95 350.9 269 66.2
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 3.5e-94 349.0 253 66.0
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 6.0e-94 348.2 273 64.1
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 7.8e-94 347.8 253 66.0
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 1.3e-93 347.1 267 65.9
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 1.5e-92 343.6 324 56.2
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 3.3e-92 342.4 289 62.6
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 3.3e-92 342.4 235 68.1
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 4.3e-92 342.0 275 63.6
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 5.6e-92 341.7 279 62.0
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 9.6e-92 340.9 243 70.4
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 2.8e-91 339.3 251 66.1
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 8.9e-90 334.3 273 61.2
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 2.6e-89 332.8 273 60.8
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 2.6e-89 332.8 273 60.4
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 1.7e-88 330.1 260 65.8
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 3.8e-88 328.9 319 54.5
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 4.9e-88 328.6 292 57.5
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 4.9e-88 328.6 319 53.9
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 2.4e-87 326.2 277 59.2
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 4.2e-87 325.5 275 58.5
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 7.1e-87 324.7 274 58.8
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 4.6e-86 322.0 273 62.3
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 8.7e-85 317.8 210 73.3
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 9.6e-84 314.3 288 55.2
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 1.1e-82 310.8 288 55.9
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 1.1e-82 310.8 288 55.9
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 1.4e-82 310.5 280 56.8
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 5.3e-82 308.5 269 63.2
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 6.9e-82 308.1 272 57.7
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 1.2e-81 307.4 272 57.4
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 2.0e-81 306.6 209 69.9
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 2.6e-81 306.2 230 65.7
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 7.6e-81 304.7 272 57.0
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 9.9e-81 304.3 240 65.8
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 7.1e-79 298.1 258 59.3
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 1.7e-77 293.5 212 67.5
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 8.7e-77 291.2 234 62.8
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 5.6e-76 288.5 209 64.1
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 2.1e-75 286.6 197 68.5
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 2.8e-75 286.2 275 53.8
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 1.1e-74 284.3 235 57.9
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 1.3e-72 277.3 267 56.6
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 3.2e-71 272.7 235 58.7
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 8.7e-69 264.6 225 57.8
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 2.0e-65 253.4 178 71.9
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 1.0e-64 251.1 223 61.9
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 5.1e-61 238.8 189 64.6
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 5.9e-57 225.3 169 68.6
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 7.2e-55 218.4 215 55.8
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 9.3e-55 218.0 177 64.4
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 3.7e-51 206.1 165 64.8
Nitab4.5_0001642g0020 Nicotiana tabacum HOM05D006519 ORTHO05D008306 4.5e-49 199.1 133 72.2
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 7.7e-49 198.4 158 63.3
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 7.2e-47 191.8 214 50.5
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 8.8e-45 184.9 176 54.5
Cre09.g394584 Chlamydomonas reinhardtii HOM05D006519 ORTHO05D008306 3.3e-44 183.0 305 39.3
MCO15G300 Micromonas commoda HOM05D006519 ORTHO05D008306 7.4e-44 181.8 237 46.0
Actinidia19081 Actinidia chinensis HOM05D006519 ORTHO05D008306 8.5e-40 168.3 139 61.9
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 1.1e-36 157.9 100 75.0
Glyma.17G093302 Glycine max HOM05D006519 ORTHO05D008306 2.8e-35 153.3 102 70.6
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 3.5e-33 146.4 125 55.2
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 9.4e-31 138.3 128 58.6
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 8.8e-29 131.7 104 60.6
CDE06G0478 Ceratophyllum demersum HOM05D006519 ORTHO05D008306 2.6e-28 130.2 83 74.7
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 2.2e-27 127.1 100 64.0
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 1.8e-26 124.0 104 54.8
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 2.7e-25 120.2 98 61.2
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 8.5e-24 115.2 97 52.6
arahy.Tifrunner.gnm1.ann1.9L22J7 Arachis hypogaea HOM05D006519 ORTHO05D014446 4.7e-22 109.4 102 51.0
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 6.1e-22 109.0 124 50.8
PRCOL_00000545 Prasinoderma coloniale HOM05D006519 ORTHO05D008306 9.8e-20 101.7 233 32.2
BcaC05g25762 Brassica carinata HOM05D006519 ORTHO05D008306 2.0e-17 94.0 79 60.8
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 1.0e-16 91.7 86 52.3
SEGI_16810 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 4.2e-15 86.3 50 82.0
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 2.1e-14 84.0 96 49.0
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 2.6e-12 77.0 65 55.4
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 3.4e-12 76.6 68 51.5
Potri.015G071001 Populus trichocarpa HOM05D006519 ORTHO05D008306 9.8e-12 75.1 54 66.7
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 2.2e-11 73.9 65 55.4


User provided reference genes

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