Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.2e-88 328.9 167 100.0
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.5e-60 235.7 169 75.1
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.2e-55 218.8 165 72.1
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 7.1e-55 217.6 171 72.5
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 1.6e-54 216.5 166 70.5
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 4.3e-52 208.4 165 67.3
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 4.3e-52 208.4 165 67.3
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 5.6e-52 208.0 170 66.5
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 3.7e-51 205.3 168 68.5
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 6.2e-51 204.5 166 66.3
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 6.2e-51 204.5 166 66.3
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 8.2e-51 204.1 166 67.5
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.2e-49 200.3 169 67.5
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 1.2e-49 200.3 169 68.0
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.5e-49 199.9 167 64.7
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 2.6e-49 199.1 170 64.7
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 3.4e-49 198.7 167 66.5
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 4.5e-49 198.4 167 64.1
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 5.8e-49 198.0 169 63.9
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 7.6e-49 197.6 168 67.9
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.7e-48 196.4 164 64.0
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 2.2e-48 196.1 164 64.0
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 2.2e-48 196.1 171 67.3
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 2.9e-48 195.7 165 67.3
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 4.9e-48 194.9 167 65.9
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 6.5e-48 194.5 165 67.3
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 6.5e-48 194.5 165 67.3
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 6.5e-48 194.5 164 65.9
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 8.4e-48 194.1 165 67.3
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 1.1e-47 193.7 164 65.2
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 1.1e-47 193.7 164 65.2
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 1.1e-47 193.7 164 65.2
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.9e-47 193.0 164 65.2
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.9e-47 193.0 164 65.2
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.9e-47 193.0 167 62.9
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.9e-47 193.0 151 70.2
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 2.5e-47 192.6 168 66.7
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.5e-47 192.6 168 66.7
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 2.5e-47 192.6 138 74.6
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 3.2e-47 192.2 164 65.2
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 3.2e-47 192.2 168 66.7
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 3.2e-47 192.2 164 67.1
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 3.2e-47 192.2 167 65.3
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 4.2e-47 191.8 152 68.4
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 4.2e-47 191.8 164 65.9
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 5.5e-47 191.4 166 65.1
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 5.5e-47 191.4 152 69.1
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 9.3e-47 190.7 168 66.7
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 9.3e-47 190.7 167 63.5
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 9.3e-47 190.7 168 63.1
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 1.2e-46 190.3 165 66.1
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 1.2e-46 190.3 165 66.1
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 1.2e-46 190.3 164 65.2
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 1.2e-46 190.3 164 65.2
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 2.1e-46 189.5 164 64.6
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 2.1e-46 189.5 164 64.0
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 2.1e-46 189.5 164 64.6
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 2.1e-46 189.5 164 64.6
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 2.1e-46 189.5 164 64.0
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.1e-46 189.5 167 65.3
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 2.1e-46 189.5 151 67.5
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 2.7e-46 189.1 165 64.8
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 2.7e-46 189.1 149 70.5
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.5e-46 188.7 167 65.3
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 3.5e-46 188.7 165 63.6
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 3.5e-46 188.7 168 63.1
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 4.6e-46 188.3 165 64.8
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 4.6e-46 188.3 166 65.1
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 6.0e-46 188.0 164 63.4
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 6.0e-46 188.0 168 63.1
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 7.9e-46 187.6 140 71.4
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 7.9e-46 187.6 167 64.1
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 1.3e-45 186.8 166 61.4
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 2.3e-45 186.0 165 64.8
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 3.0e-45 185.7 172 64.0
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 3.9e-45 185.3 171 64.9
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 3.9e-45 185.3 140 71.4
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 5.1e-45 184.9 165 64.2
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 5.1e-45 184.9 165 64.2
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 5.1e-45 184.9 164 62.2
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 8.7e-45 184.1 165 63.6
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 1.5e-44 183.3 165 63.6
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 1.5e-44 183.3 164 61.6
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 2.5e-44 182.6 165 63.6
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 2.5e-44 182.6 166 62.0
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 3.3e-44 182.2 100 88.0
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 3.3e-44 182.2 100 88.0
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 3.3e-44 182.2 166 61.4
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 4.3e-44 181.8 153 64.1
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 4.3e-44 181.8 103 87.4
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 5.7e-44 181.4 166 60.8
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 9.7e-44 180.6 139 69.1
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 1.3e-43 180.3 168 60.1
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 1.6e-43 179.9 154 65.6
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 1.6e-43 179.9 166 63.9
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 2.2e-43 179.5 166 62.7
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 2.8e-43 179.1 157 63.1
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 2.8e-43 179.1 169 62.1
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 3.7e-43 178.7 100 87.0
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 6.3e-43 177.9 165 60.0
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 8.2e-43 177.6 116 78.4
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 8.2e-43 177.6 111 80.2
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 1.4e-42 176.8 139 67.6
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 1.8e-42 176.4 168 62.5
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 5.3e-42 174.9 166 59.6
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 5.3e-42 174.9 100 83.0
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 9.0e-42 174.1 117 76.9
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 1.2e-41 173.7 157 61.1
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 2.0e-41 172.9 143 67.1
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 3.4e-41 172.2 165 60.0
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 2.1e-38 162.9 98 81.6
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 2.7e-38 162.5 166 57.8
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.9e-36 156.4 161 59.0
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 2.8e-35 152.5 166 54.2
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 3.7e-35 152.1 115 67.0
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 6.3e-35 151.4 147 53.7
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 3.1e-34 149.1 166 55.4
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 7.7e-33 144.4 146 54.1
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 2.7e-30 136.0 96 68.8
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 4.7e-30 135.2 116 59.5
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 3.9e-29 132.1 114 57.9
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 3.4e-25 119.0 165 48.5
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 3.8e-24 115.5 74 77.0
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 2.8e-19 99.4 129 48.8
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 8.2e-19 97.8 91 54.9
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.0e-16 90.9 134 44.0
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 2.5e-15 86.3 52 80.8
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 1.2e-14 84.0 50 82.0
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 1.2e-14 84.0 50 82.0
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 1.4e-10 70.5 118 35.6


User provided reference genes

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