Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 0.0e+00 1406.3 723 100.0
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 1.2e-175 620.9 751 51.9
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 2.4e-168 596.7 881 43.0
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 1.9e-160 570.5 731 50.6
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 1.3e-158 564.3 733 46.9
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 3.0e-158 563.1 911 41.5
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 4.8e-156 555.8 713 47.1
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 9.4e-136 488.4 760 41.1
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 1.2e-130 471.5 761 42.0
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 2.9e-129 466.8 757 41.1
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 6.5e-129 465.7 745 42.6
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 3.6e-127 459.9 805 40.0
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 3.9e-126 456.4 772 41.6
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 7.0e-123 445.7 742 41.2
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 6.5e-121 439.1 740 41.6
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 4.2e-120 436.4 751 41.3
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 1.6e-119 434.5 773 41.1
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 6.1e-119 432.6 743 40.9
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 3.1e-115 420.2 751 39.5
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 6.5e-113 412.5 757 39.9
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 1.7e-108 397.9 775 37.5
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 1.1e-107 395.2 756 39.8
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 9.1e-107 392.1 764 39.5
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 2.3e-105 387.5 761 40.2
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 1.5e-104 384.8 740 39.5
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 9.5e-104 382.1 767 38.9
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 1.2e-103 381.7 764 38.7
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 2.3e-102 377.5 757 39.8
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 1.7e-100 371.3 747 37.8
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 2.8e-100 370.5 776 36.0
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.4e-99 367.5 754 35.5
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 4.1e-99 366.7 758 39.3
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 2.9e-97 360.5 768 36.3
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 5.0e-97 359.8 689 38.0
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 6.6e-97 359.4 774 37.3
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 1.6e-95 354.8 738 37.5
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 2.8e-95 354.0 780 35.0
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 6.1e-95 352.8 763 37.0
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 1.4e-94 351.7 738 37.7
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 4.0e-94 350.1 725 37.4
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 6.4e-92 342.8 747 36.5
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 2.0e-90 337.8 833 35.1
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.3e-89 335.1 773 35.8
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 3.0e-89 334.0 751 36.4
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 3.0e-89 334.0 748 35.6
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 3.9e-89 333.6 751 34.6
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 3.9e-89 333.6 752 36.6
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 5.0e-89 333.2 773 35.8
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 5.0e-89 333.2 760 35.5
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 8.6e-89 332.4 757 34.9
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 1.4e-86 325.1 755 33.9
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 1.4e-86 325.1 757 34.6
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 8.9e-86 322.4 754 33.3
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 1.7e-84 318.2 757 34.1
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 4.9e-84 316.6 759 36.0
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 4.1e-83 313.5 721 33.1
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.6e-82 311.6 761 36.0
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 2.1e-82 311.2 770 33.5
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 3.5e-82 310.5 763 35.9
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 1.3e-81 308.5 740 34.7
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 3.0e-81 307.4 761 35.7
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 5.0e-81 306.6 740 34.1
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 1.1e-80 305.4 755 34.7
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 2.5e-80 304.3 753 32.9
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 1.6e-79 301.6 755 32.7
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 1.1e-78 298.9 771 35.4
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 1.1e-78 298.9 729 34.7
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 5.2e-78 296.6 754 32.4
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 7.5e-77 292.7 744 32.9
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.4e-75 288.5 743 34.7
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 1.6e-74 285.0 747 32.7
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 3.9e-73 280.4 732 32.1
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 1.2e-71 275.4 728 32.4
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 2.4e-67 261.2 768 33.2
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 1.2e-66 258.8 775 32.6
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 2.3e-65 254.6 745 31.9
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 5.1e-65 253.4 807 33.5
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 3.3e-64 250.8 744 31.2
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 4.7e-63 246.9 765 29.9
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 1.8e-62 245.0 761 33.8
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 1.8e-62 245.0 772 31.9
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 1.5e-61 241.9 789 30.2
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 9.9e-61 239.2 701 30.8
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 1.9e-59 235.0 767 31.7
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 7.1e-59 233.0 758 30.9
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 1.6e-58 231.9 685 31.5
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 2.1e-58 231.5 740 33.4
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 2.7e-58 231.1 780 30.9
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 2.3e-57 228.0 737 30.8
ATR0021G035 Amborella trichopoda HOM05D005664 ORTHO05D006509 5.1e-57 226.9 859 32.2
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 2.8e-55 221.1 742 29.5
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 3.6e-55 220.7 763 30.3
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 1.8e-54 218.4 732 30.1
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 1.3e-52 212.2 695 30.1
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 6.4e-52 209.9 709 30.7
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 6.4e-52 209.9 702 29.9
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 1.4e-51 208.8 706 29.3
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 4.2e-51 207.2 750 29.9
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 9.3e-51 206.1 730 30.1
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 1.6e-50 205.3 807 32.3
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 1.1e-48 199.1 780 30.1
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 3.3e-48 197.6 785 30.4
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 4.3e-48 197.2 760 28.8
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 9.6e-48 196.1 776 30.7
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 1.8e-46 191.8 826 29.3
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 6.9e-46 189.9 791 29.3
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 6.9e-46 189.9 300 41.3
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 2.9e-44 184.5 698 29.9
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 8.4e-44 183.0 793 28.5
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 1.9e-43 181.8 737 28.2
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 1.2e-42 179.1 793 28.4
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 7.9e-42 176.4 703 27.6
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 1.0e-41 176.0 713 29.5
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 1.9e-40 171.8 698 29.2
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 1.9e-40 171.8 158 57.0
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 2.8e-39 167.9 699 28.3
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 2.8e-39 167.9 699 28.3
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 4.8e-39 167.2 766 27.4
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 1.8e-38 165.2 705 28.7
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 1.8e-38 165.2 705 28.7
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 4.0e-38 164.1 765 29.3
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 2.6e-37 161.4 779 29.1
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 7.6e-37 159.8 779 29.0
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 4.9e-36 157.1 765 27.7
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 2.5e-35 154.8 744 28.0
SEGI_32826 Sequoiadendron giganteum HOM05D005664 ORTHO05D006509 4.3e-32 144.1 856 25.7
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 1.3e-31 142.5 707 25.9
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 1.3e-31 142.5 787 26.7
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 6.5e-28 130.2 665 26.9
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 2.5e-27 128.3 118 50.8
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 5.7e-24 117.1 190 37.4
Os04g0431000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D006509 1.9e-19 102.1 228 35.1
HPP92_028056 Vanilla planifolia HOM05D005664 ORTHO05D006509 9.4e-19 99.8 244 36.1
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 9.7e-16 89.7 511 26.0
Os02g0550000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D037008 7.7e-13 80.1 766 22.5
Zm00001eb243360 Zea mays HOM05D019841 ORTHO05D037008 2.2e-07 62.0 197 29.9


User provided reference genes

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