Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 3.1e-179 631.7 322 100.0
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 2.0e-98 363.2 319 62.4
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 2.3e-94 349.7 321 59.2
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 7.7e-90 334.7 321 57.6
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.9e-88 330.1 319 54.9
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 6.8e-86 321.6 319 55.2
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 8.8e-86 321.2 321 54.2
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 5.7e-85 318.5 320 55.9
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 7.5e-85 318.2 318 55.7
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 7.5e-85 318.2 317 54.3
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 4.1e-83 312.4 310 54.5
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 9.1e-83 311.2 317 54.3
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 2.0e-82 310.1 320 53.4
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 2.0e-82 310.1 319 53.3
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 7.7e-82 308.1 319 53.9
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 1.0e-81 307.8 321 51.7
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 1.7e-81 307.0 339 52.5
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 1.7e-81 307.0 299 54.8
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 2.9e-81 306.2 317 53.6
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 5.0e-81 305.4 319 53.3
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 5.0e-81 305.4 318 52.8
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 1.1e-80 304.3 321 52.6
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.1e-80 304.3 322 53.1
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 2.5e-80 303.1 319 52.0
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 7.2e-80 301.6 341 51.0
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 9.4e-80 301.2 347 51.0
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 1.2e-79 300.8 316 52.2
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 4.7e-79 298.9 322 52.8
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 4.7e-79 298.9 326 51.8
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 1.0e-78 297.7 320 51.6
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 1.4e-78 297.4 324 52.2
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.8e-78 297.0 321 53.0
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 3.0e-78 296.2 319 52.0
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 5.2e-78 295.4 321 51.4
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 8.8e-78 294.7 320 50.3
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 1.2e-77 294.3 302 53.6
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 3.4e-77 292.7 302 52.6
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 8.3e-76 288.1 321 50.2
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 2.0e-74 283.5 303 52.8
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 1.7e-73 280.4 319 50.2
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 1.7e-73 280.4 317 45.1
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 2.3e-73 280.0 317 47.9
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 6.6e-73 278.5 326 48.8
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 6.6e-73 278.5 345 47.5
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 1.5e-72 277.3 320 50.0
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 4.3e-72 275.8 316 50.0
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 9.5e-72 274.6 323 48.3
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 2.1e-71 273.5 347 45.0
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 1.8e-70 270.4 321 46.7
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 6.8e-70 268.5 316 48.1
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 2.0e-69 266.9 295 50.5
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 3.4e-69 266.2 320 46.9
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 3.4e-69 266.2 388 43.6
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 2.2e-68 263.5 320 47.2
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 2.2e-68 263.5 316 45.6
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 8.3e-68 261.5 325 45.8
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 7.0e-67 258.5 318 46.2
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 1.2e-66 257.7 331 44.1
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 1.6e-66 257.3 317 46.7
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 2.7e-66 256.5 316 44.6
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 2.7e-66 256.5 316 44.6
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 3.5e-66 256.1 316 46.5
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 5.9e-66 255.4 325 44.0
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 2.3e-65 253.4 313 45.4
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 2.3e-65 253.4 322 42.2
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 3.0e-65 253.1 316 44.9
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 3.9e-65 252.7 312 45.5
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 1.5e-64 250.8 345 42.9
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 3.3e-64 249.6 317 47.9
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 6.2e-63 245.4 316 43.7
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 1.0e-62 244.6 315 44.4
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 1.0e-62 244.6 364 40.9
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 2.3e-62 243.4 329 44.1
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 1.2e-61 241.1 336 44.0
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 3.4e-61 239.6 371 41.0
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 9.8e-61 238.0 321 43.9
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 1.3e-60 237.7 343 42.0
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 2.2e-60 236.9 323 42.4
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 4.9e-60 235.7 325 41.5
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 1.4e-59 234.2 319 42.0
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 1.2e-58 231.1 264 48.1
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 2.3e-57 226.9 320 42.2
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.5e-56 224.2 319 42.0
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 2.5e-56 223.4 405 35.6
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.8e-55 219.9 173 61.8
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 3.1e-54 216.5 242 52.5
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 3.7e-52 209.5 178 56.7
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 4.9e-52 209.1 275 47.3
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 5.6e-48 195.7 163 58.3
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 2.1e-47 193.7 224 46.0
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 3.6e-47 193.0 281 39.9
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 1.1e-46 191.4 281 39.1
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 4.0e-46 189.5 257 43.2
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 4.0e-46 189.5 257 43.2
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 8.4e-44 181.8 236 46.6
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 5.4e-43 179.1 141 61.0
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 1.0e-41 174.9 299 39.1
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 1.9e-35 154.1 236 41.1
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 9.6e-24 115.2 91 60.4
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 9.6e-24 115.2 91 60.4
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 7.6e-21 105.5 205 35.6
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 9.3e-19 98.6 107 51.4
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.1e-15 87.4 93 51.6
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 2.4e-14 84.0 88 53.4
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 5.3e-14 82.8 318 27.4
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 1.4e-11 74.7 87 46.0
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 2.5e-11 73.9 86 46.5
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 3.0e-09 67.0 93 41.9
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 1.3e-07 61.6 225 19.6
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 2.1e-07 60.8 59 49.2


User provided reference genes

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