Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g08895_MAGBIO Magnolia biondii HOM05D001827 ORTHO05D001790 2.5e-49 198.7 121 100.0
MBI14_g13533_MAGBIO Magnolia biondii HOM05D001827 ORTHO05D001790 1.7e-21 106.3 97 78.4
Sed0007556 Sechium edule HOM05D001827 ORTHO05D001790 1.6e-11 73.2 48 87.5
CsaV3_3G004170 Cucumis sativus L. HOM05D001827 ORTHO05D001790 8.6e-10 67.4 48 81.2
MELO3C014113.2 Cucumis melo HOM05D001827 ORTHO05D001790 1.1e-09 67.0 48 81.2
Peaxi162Scf00006g00416 Petunia axillaris HOM05D001827 ORTHO05D001790 1.1e-09 67.0 64 68.8
CiPaw.12G139200 Carya illinoinensis HOM05D001827 ORTHO05D001790 2.5e-09 65.9 55 70.9
Aa31LG5G11980 Aethionema arabicum HOM05D001812 ORTHO05D001874 3.3e-09 65.5 48 77.1
Glyma.02G301400 Glycine max HOM05D001827 ORTHO05D001790 5.6e-09 64.7 48 77.1
Sp6g17740 Schrenkiella parvula HOM05D001827 ORTHO05D001790 5.6e-09 64.7 57 68.4
GSVIVG01014707001 Vitis vinifera HOM05D001827 ORTHO05D001790 5.6e-09 64.7 56 71.4
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 7.3e-09 64.3 56 71.4
Eucgr.F02039 Eucalyptus grandis HOM05D001827 ORTHO05D001790 7.3e-09 64.3 69 62.3
PSO210G4928 Papaver somniferum HOM05D001827 ORTHO05D001790 7.3e-09 64.3 60 68.3
PSO210G6911 Papaver somniferum HOM05D001827 ORTHO05D001790 7.3e-09 64.3 60 68.3
Lj6A253T12 Lonicera japonica HOM05D001827 ORTHO05D001790 1.6e-08 63.2 48 75.0
MSTRG.7004 Avicennia marina HOM05D001827 ORTHO05D001790 2.1e-08 62.8 104 49.0
BcaC04g20191 Brassica carinata HOM05D001827 ORTHO05D001790 2.8e-08 62.4 57 66.7
A10p13080 Brassica napus HOM05D001827 ORTHO05D001790 2.8e-08 62.4 57 66.7
C09p46840 Brassica napus HOM05D001827 ORTHO05D001790 2.8e-08 62.4 57 66.7
BolC9t57534H Brassica oleracea HOM05D001827 ORTHO05D001790 2.8e-08 62.4 57 66.7
Cc05_g15100 Coffea canephora HOM05D001827 ORTHO05D001790 2.8e-08 62.4 43 88.4
Dinv40871 Davidia involucrata HOM05D001827 ORTHO05D001790 2.8e-08 62.4 63 63.5
HPP92_003811 Vanilla planifolia HOM05D001827 ORTHO05D001790 2.8e-08 62.4 44 79.5
CSS0010892 Camellia sinensis var. sinensis HOM05D001827 ORTHO05D001790 4.7e-08 61.6 66 65.2
CSS0027094 Camellia sinensis var. sinensis HOM05D001827 ORTHO05D001790 4.7e-08 61.6 66 65.2
CARHR269240 Cardamine hirsuta HOM05D001827 ORTHO05D001790 4.7e-08 61.6 72 56.9
AUR62035660 Chenopodium quinoa HOM05D001827 ORTHO05D001790 4.7e-08 61.6 62 62.9
Gohir.D05G384900 Gossypium hirsutum HOM05D001827 ORTHO05D001790 4.7e-08 61.6 59 71.2
Lj1C892G3 Lonicera japonica HOM05D001827 ORTHO05D001790 4.7e-08 61.6 36 94.4
Solyc07g065680.3 Solanum lycopersicum HOM05D001827 ORTHO05D001790 4.7e-08 61.6 36 94.4
Sopen07g033890 Solanum pennellii HOM05D001827 ORTHO05D001790 4.7e-08 61.6 36 94.4
PGSC0003DMG400022271 Solanum tuberosum HOM05D001827 ORTHO05D001790 4.7e-08 61.6 36 94.4
BraA03t10681Z Brassica rapa HOM05D001827 ORTHO05D001790 6.2e-08 61.2 58 67.2
AUR62017147 Chenopodium quinoa HOM05D001827 ORTHO05D001790 6.2e-08 61.2 62 62.9
Thhalv10012934m.g Eutrema salsugineum HOM05D001827 ORTHO05D001790 6.2e-08 61.2 57 64.9
BcaNung07010 Brassica carinata HOM05D001827 ORTHO05D001790 8.1e-08 60.8 57 64.9
CANSAT11G0161 Cannabis sativa HOM05D001827 ORTHO05D001790 8.1e-08 60.8 57 68.4
CDE01G0234 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 8.1e-08 60.8 48 70.8
SalBow8G5165 Salvia bowleyana HOM05D001827 ORTHO05D001790 8.1e-08 60.8 63 61.9
CAN.G623.22 Capsicum annuum HOM05D001827 ORTHO05D001790 1.1e-07 60.5 101 44.6
Gohir.A04G005000 Gossypium hirsutum HOM05D001827 ORTHO05D001790 1.1e-07 60.5 58 70.7
Gorai.009G451600 Gossypium raimondii HOM05D001827 ORTHO05D001790 1.1e-07 60.5 58 70.7
Lj6g0015113 Lotus japonicus HOM05D001827 ORTHO05D001790 1.1e-07 60.5 36 91.7
Manes.15G058600 Manihot esculenta HOM05D001827 ORTHO05D001790 1.1e-07 60.5 37 89.2
CDE02G3428 Ceratophyllum demersum HOM05D001827 ORTHO05D001790 1.4e-07 60.1 47 70.2
Lalb_Chr15g0082201 Lupinus albus HOM05D001827 ORTHO05D001790 1.4e-07 60.1 58 63.8
Prupe.6G025300 Prunus persica HOM05D001827 ORTHO05D001790 1.4e-07 60.1 43 83.7
THA.LOC104817709 Tarenaya hassleriana HOM05D001827 ORTHO05D001790 1.4e-07 60.1 41 82.9
Ah.06g180970 Amaranthus hybridus HOM05D001827 ORTHO05D001790 1.8e-07 59.7 104 47.1
AL236U10010 Arabidopsis lyrata HOM05D001827 ORTHO05D001790 1.8e-07 59.7 55 67.3
MSTRG.14494 Avicennia marina HOM05D001827 ORTHO05D001790 1.8e-07 59.7 37 89.2
CiPaw.11G205100 Carya illinoinensis HOM05D001827 ORTHO05D001790 1.8e-07 59.7 42 81.0
Ciclev10007701m.g Citrus clementina HOM05D001827 ORTHO05D001790 1.8e-07 59.7 44 79.5
Actinidia30387 Actinidia chinensis HOM05D001827 ORTHO05D001790 2.3e-07 59.3 43 83.7
Carub.0008s1622 Capsella rubella HOM05D001827 ORTHO05D001790 2.3e-07 59.3 54 66.7
Hma1.2p1_1516F.1_g288370 Hydrangea macrophylla HOM05D001827 ORTHO05D001790 2.3e-07 59.3 61 63.9
MD03G1029200 Malus domestica HOM05D001827 ORTHO05D001790 2.3e-07 59.3 61 62.3
Hund01866 Selenicereus undatus HOM05D001827 ORTHO05D001790 2.3e-07 59.3 56 62.5
ClCG10G004390 Citrullus lanatus HOM05D001827 ORTHO05D001790 3.1e-07 58.9 37 86.5
FAN16G2144 Fragaria x ananassa HOM05D001827 ORTHO05D001790 3.1e-07 58.9 35 91.4
RcHm_v2.0_Chr5g0076481 Rosa chinensis HOM05D001827 ORTHO05D001790 3.1e-07 58.9 57 64.9
Atru.chr2.3710 Acer truncatum HOM05D001827 ORTHO05D001790 4.0e-07 58.5 44 77.3
Aqoxy1G04278 Aquilegia oxysepala HOM05D001827 ORTHO05D001790 4.0e-07 58.5 48 72.9
Duzib213G1002 Durio zibethinus HOM05D001827 ORTHO05D001790 4.0e-07 58.5 63 61.9
Nitab4.5_0004583g0090 Nicotiana tabacum HOM05D001827 ORTHO05D001790 4.0e-07 58.5 101 39.6
Oeu046939.1 Olea europaea HOM05D001827 ORTHO05D001790 4.0e-07 58.5 35 91.4
Peaxi162Scf00139g01120 Petunia axillaris HOM05D001827 ORTHO05D001790 4.0e-07 58.5 35 91.4
Psat5g165560 Pisum sativum HOM05D001827 ORTHO05D001790 4.0e-07 58.5 46 73.9
Rhsim06G0231100 Rhododendron simsii HOM05D001827 ORTHO05D001790 4.0e-07 58.5 44 79.5
Duzib268G1786 Durio zibethinus HOM05D001827 ORTHO05D001790 5.2e-07 58.2 63 63.5
Glyma.08G330800 Glycine max HOM05D001827 ORTHO05D001790 6.8e-07 57.8 44 79.5
Haze_09842 Corylus avellana HOM05D001827 ORTHO05D001790 8.9e-07 57.4 41 82.9
FAN21G2473 Fragaria x ananassa HOM05D001827 ORTHO05D001790 8.9e-07 57.4 62 61.3
Glyma.18G075600 Glycine max HOM05D001827 ORTHO05D001790 8.9e-07 57.4 43 81.4
Medtr3g060660 Medicago truncatula HOM05D001827 ORTHO05D001790 8.9e-07 57.4 43 79.1
Phvul.008G279900 Phaseolus vulgaris HOM05D001827 ORTHO05D001790 8.9e-07 57.4 48 66.7
QL08p003651 Quercus lobata HOM05D001827 ORTHO05D001790 8.9e-07 57.4 43 76.7
Ca_06402_v3 Cicer arietinum L. HOM05D001827 ORTHO05D001790 1.2e-06 57.0 52 71.2
FvH4_3g42741 Fragaria vesca HOM05D001827 ORTHO05D001790 1.2e-06 57.0 57 64.9
FAN11G2212 Fragaria x ananassa HOM05D001827 ORTHO05D001790 1.2e-06 57.0 57 64.9
FAN25G2361 Fragaria x ananassa HOM05D001827 ORTHO05D001790 1.2e-06 57.0 57 64.9
Manes.03G142600 Manihot esculenta HOM05D001827 ORTHO05D001790 1.2e-06 57.0 43 79.1
Nitab4.5_0003692g0050 Nicotiana tabacum HOM05D001827 ORTHO05D001790 1.2e-06 57.0 101 38.6
PGR083G1584 Punica granatum HOM05D001827 ORTHO05D001790 1.2e-06 57.0 44 75.0
Ca_12442_v3 Cicer arietinum L. HOM05D001827 ORTHO05D001790 1.5e-06 56.6 44 77.3
Ciclev10006878m.g Citrus clementina HOM05D001827 ORTHO05D001790 1.5e-06 56.6 44 70.5
Medtr5g096080 Medicago truncatula HOM05D001827 ORTHO05D001790 1.5e-06 56.6 65 52.3
Phvul.006G058800 Phaseolus vulgaris HOM05D001827 ORTHO05D001790 1.5e-06 56.6 44 77.3
Sabra16G0242100 Salix brachista HOM05D001827 ORTHO05D001790 1.5e-06 56.6 34 91.2
Sc03g0011630 Simmondsia chinensis HOM05D001827 ORTHO05D001790 1.5e-06 56.6 33 93.9
Thecc.07G010300 Theobroma cacao HOM05D001827 ORTHO05D001790 1.5e-06 56.6 44 77.3
vmacro11602 Vaccinium macrocarpon HOM05D001827 ORTHO05D001790 1.5e-06 56.6 44 77.3
Actinidia04995 Actinidia chinensis HOM05D001827 ORTHO05D001790 2.0e-06 56.2 43 76.7
MSTRG.13024 Avicennia marina HOM05D001827 ORTHO05D001790 2.0e-06 56.2 36 86.1
A03p13780 Brassica napus HOM05D001827 ORTHO05D001790 2.0e-06 56.2 51 70.6
C03p16210 Brassica napus HOM05D001827 ORTHO05D001790 2.0e-06 56.2 71 60.6
BolC3t14044H Brassica oleracea HOM05D001827 ORTHO05D001790 2.0e-06 56.2 51 70.6
Potri.001G369200 Populus trichocarpa HOM05D001827 ORTHO05D001790 2.0e-06 56.2 35 85.7
TAR517G0007 Trochodendron aralioides HOM05D001827 ORTHO05D001790 2.0e-06 56.2 33 93.9
AT5G55860 Arabidopsis thaliana HOM05D001827 ORTHO05D001790 2.6e-06 55.8 50 68.0
arahy.Tifrunner.gnm1.ann1.21F8WZ Arachis hypogaea HOM05D001827 ORTHO05D001790 2.6e-06 55.8 37 83.8
arahy.Tifrunner.gnm1.ann1.U3UNQX Arachis hypogaea HOM05D001827 ORTHO05D001790 2.6e-06 55.8 34 91.2
arahy.Tifrunner.gnm1.ann1.UDIE03 Arachis hypogaea HOM05D001827 ORTHO05D001790 2.6e-06 55.8 34 91.2
Cfa016913 Carpinus fangiana HOM05D001827 ORTHO05D001790 2.6e-06 55.8 41 80.5
COL.COLO4_09854 Corchorus olitorius HOM05D001827 ORTHO05D001790 2.6e-06 55.8 57 63.2
Medtr3g007920 Medicago truncatula HOM05D001827 ORTHO05D001790 2.6e-06 55.8 65 52.3
RcHm_v2.0_Chr5g0076551 Rosa chinensis HOM05D001827 ORTHO05D001790 2.6e-06 55.8 55 67.3
AL8G31440 Arabidopsis lyrata HOM05D001827 ORTHO05D001790 3.4e-06 55.5 50 68.0
THA.LOC104811675 Tarenaya hassleriana HOM05D001827 ORTHO05D001790 3.4e-06 55.5 43 72.1
VMungo0540G0539 Vigna mungo HOM05D001827 ORTHO05D001790 3.4e-06 55.5 99 44.4
Aa31LG3G11780 Aethionema arabicum HOM05D001827 ORTHO05D001790 4.4e-06 55.1 56 60.7
HanXRQChr03g0080331 Helianthus annuus HOM05D001827 ORTHO05D001790 4.4e-06 55.1 53 62.3
Hma1.2p1_1094F.1_g256430 Hydrangea macrophylla HOM05D001827 ORTHO05D001790 4.4e-06 55.1 32 93.8
TWI38G2079 Tripterygium wilfordii HOM05D001827 ORTHO05D001790 4.4e-06 55.1 43 76.7
EL10Ac4g07523 Beta vulgaris HOM05D001827 ORTHO05D001790 5.8e-06 54.7 61 63.9
Lj6A248T28 Lonicera japonica HOM05D001827 ORTHO05D001790 5.8e-06 54.7 37 78.4
DCAR_013243 Daucus carota HOM05D001827 ORTHO05D001790 7.6e-06 54.3 35 82.9
unitig_0.g2012 Utricularia gibba HOM05D001827 ORTHO05D001790 7.6e-06 54.3 36 80.6
arahy.Tifrunner.gnm1.ann1.5CFI8R Arachis hypogaea HOM05D001827 ORTHO05D001790 9.9e-06 53.9 36 83.3


User provided reference genes

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