Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g08147_MAGBIO Magnolia biondii HOM05D006228 ORTHO05D007847 1.4e-251 872.5 439 100.0
TAR633G1830 Trochodendron aralioides HOM05D006228 ORTHO05D007847 1.4e-163 580.1 441 66.2
Dinv34431 Davidia involucrata HOM05D006228 ORTHO05D007847 1.8e-161 573.2 440 65.9
Nn2g13585 Nelumbo nucifera HOM05D006228 ORTHO05D007847 4.9e-156 555.1 430 65.8
Actinidia13913 Actinidia chinensis HOM05D006228 ORTHO05D007847 2.7e-154 549.3 423 65.2
CSS0000174 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 6.9e-150 534.6 426 64.1
CSS0026214 Camellia sinensis var. sinensis HOM05D006228 ORTHO05D007847 1.2e-149 533.9 426 63.8
Rhsim09G0171700 Rhododendron simsii HOM05D006228 ORTHO05D007847 1.2e-149 533.9 448 62.3
PSO384G3635 Papaver somniferum HOM05D006228 ORTHO05D007847 9.4e-147 524.2 435 62.3
Potri.008G063500 Populus trichocarpa HOM05D006228 ORTHO05D007847 1.2e-146 523.9 451 62.1
Aqoxy1G00736 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 4.3e-144 515.4 431 62.2
PGSC0003DMG400007303 Solanum tuberosum HOM05D006228 ORTHO05D007847 5.7e-144 515.0 413 62.2
GSVIVG01016380001 Vitis vinifera HOM05D006228 ORTHO05D007847 5.7e-144 515.0 442 59.3
Solyc06g009690.3 Solanum lycopersicum HOM05D006228 ORTHO05D007847 2.2e-143 513.1 429 60.4
Aqoxy3G00589 Aquilegia oxysepala HOM05D006228 ORTHO05D007847 1.8e-142 510.0 431 61.5
Sopen06g004350 Solanum pennellii HOM05D006228 ORTHO05D007847 3.1e-142 509.2 415 61.4
CiPaw.01G295100 Carya illinoinensis HOM05D006228 ORTHO05D007847 5.3e-142 508.4 442 59.0
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 5.3e-142 508.4 425 62.4
Prupe.2G245100 Prunus persica HOM05D006228 ORTHO05D007847 6.9e-142 508.1 440 58.9
CAN.G1280.21 Capsicum annuum HOM05D006228 ORTHO05D007847 1.2e-141 507.3 431 59.2
TWI09G0225 Tripterygium wilfordii HOM05D006228 ORTHO05D007847 1.2e-141 507.3 430 61.4
EL10Ac2g04780 Beta vulgaris HOM05D006228 ORTHO05D007847 1.3e-140 503.8 425 60.0
Thecc.10G027500 Theobroma cacao HOM05D006228 ORTHO05D007847 1.3e-140 503.8 427 59.7
RcHm_v2.0_Chr1g0369221 Rosa chinensis HOM05D006228 ORTHO05D007847 3.8e-140 502.3 422 60.2
AUR62022833 Chenopodium quinoa HOM05D006228 ORTHO05D007847 1.4e-139 500.4 427 59.3
Nitab4.5_0012179g0020 Nicotiana tabacum HOM05D006228 ORTHO05D007847 4.2e-139 498.8 445 58.2
MD07G1212900 Malus domestica HOM05D006228 ORTHO05D007847 1.6e-138 496.9 430 58.1
Cc02_g06990 Coffea canephora HOM05D006228 ORTHO05D007847 6.1e-138 495.0 441 58.5
Peaxi162Scf00401g00030 Petunia axillaris HOM05D006228 ORTHO05D007847 1.0e-137 494.2 418 60.5
Nitab4.5_0000278g0180 Nicotiana tabacum HOM05D006228 ORTHO05D007847 5.1e-137 491.9 419 59.7
Migut.F00709 Erythranthe guttata HOM05D006228 ORTHO05D007847 2.6e-136 489.6 425 59.3
Manes.10G018500 Manihot esculenta HOM05D006228 ORTHO05D007847 6.3e-135 485.0 448 57.4
Cfa005508 Carpinus fangiana HOM05D006228 ORTHO05D007847 1.8e-134 483.4 420 60.0
Gohir.D06G170400 Gossypium hirsutum HOM05D006228 ORTHO05D007847 1.8e-134 483.4 418 58.4
Gorai.010G199300 Gossypium raimondii HOM05D006228 ORTHO05D007847 3.1e-134 482.6 418 58.1
COL.COLO4_25614 Corchorus olitorius HOM05D006228 ORTHO05D007847 4.1e-134 482.3 419 57.3
Lj6g0016911 Lotus japonicus HOM05D006228 ORTHO05D007847 3.5e-133 479.2 444 55.9
Oeu006660.1 Olea europaea HOM05D006228 ORTHO05D007847 7.7e-133 478.0 427 58.3
Glyma.18G031000 Glycine max HOM05D006228 ORTHO05D007847 1.3e-132 477.2 436 56.0
ClCG11G010510 Citrullus lanatus HOM05D006228 ORTHO05D007847 2.2e-132 476.5 435 57.5
Lj1A949T58 Lonicera japonica HOM05D006228 ORTHO05D007847 2.2e-132 476.5 457 55.6
CsaV3_5G008840 Cucumis sativus L. HOM05D006228 ORTHO05D007847 1.1e-131 474.2 440 56.4
Gohir.A06G164900 Gossypium hirsutum HOM05D006228 ORTHO05D007847 2.5e-131 473.0 418 57.7
Hund13827 Selenicereus undatus HOM05D006228 ORTHO05D007847 2.5e-131 473.0 492 53.0
AUR62012200 Chenopodium quinoa HOM05D006228 ORTHO05D007847 3.2e-131 472.6 414 56.3
VMungo1383G2528 Vigna mungo HOM05D006228 ORTHO05D007847 4.2e-131 472.2 429 56.4
Ca_17139_v3 Cicer arietinum L. HOM05D006228 ORTHO05D007847 9.4e-131 471.1 428 55.8
THA.LOC104810050 Tarenaya hassleriana HOM05D006228 ORTHO05D007847 2.1e-130 469.9 429 58.0
Psat5g127520 Pisum sativum HOM05D006228 ORTHO05D007847 3.6e-130 469.2 428 54.0
Medtr3g070010 Medicago truncatula HOM05D006228 ORTHO05D007847 4.7e-130 468.8 423 55.1
FAN03G1418 Fragaria x ananassa HOM05D006228 ORTHO05D007847 6.1e-130 468.4 431 55.7
SGA_v2.0_scaffold2G01060 Striga asiatica HOM05D006228 ORTHO05D007847 6.1e-130 468.4 416 57.9
Sabra08G0046800 Salix brachista HOM05D006228 ORTHO05D007847 1.4e-129 467.2 451 57.2
Lalb_Chr18g0052781 Lupinus albus HOM05D006228 ORTHO05D007847 1.1e-128 464.2 435 55.6
Sed0002982 Sechium edule HOM05D006228 ORTHO05D007847 1.5e-128 463.8 428 57.9
TPR.G29810 Trifolium pratense HOM05D006228 ORTHO05D007847 2.0e-128 463.4 426 53.5
Ah.16g103060 Amaranthus hybridus HOM05D006228 ORTHO05D007847 7.4e-128 461.5 437 55.8
arahy.Tifrunner.gnm1.ann1.H1F5T1 Arachis hypogaea HOM05D006228 ORTHO05D007847 7.4e-128 461.5 443 55.3
Hma1.2p1_0026F.1_g016930 Hydrangea macrophylla HOM05D006228 ORTHO05D007847 2.8e-127 459.5 303 71.3
Aa31LG5G19710 Aethionema arabicum HOM05D006228 ORTHO05D007847 8.2e-127 458.0 419 55.8
FAN06G4757 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.2e-125 454.1 423 55.1
FAN01G0169 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.0e-125 453.4 423 55.1
ATR0580G418 Amborella trichopoda HOM05D006228 ORTHO05D007847 2.6e-125 453.0 416 55.8
FvH4_7g23870 Fragaria vesca HOM05D006228 ORTHO05D007847 4.5e-125 452.2 439 53.8
HanXRQChr09g0246891 Helianthus annuus HOM05D006228 ORTHO05D007847 1.0e-124 451.1 417 55.2
Thhalv10016686m.g Eutrema salsugineum HOM05D006228 ORTHO05D007847 2.2e-124 449.9 424 55.2
AT2G39910 Arabidopsis thaliana HOM05D006228 ORTHO05D007847 2.5e-123 446.4 422 54.3
ECA232G3403 Erigeron canadensis HOM05D006228 ORTHO05D007847 1.6e-122 443.7 415 54.5
vmacro10067 Vaccinium macrocarpon HOM05D006228 ORTHO05D007847 1.6e-122 443.7 483 53.4
BraA03t11466Z Brassica rapa HOM05D006228 ORTHO05D007847 2.7e-122 443.0 417 54.9
AL4G37490 Arabidopsis lyrata HOM05D006228 ORTHO05D007847 3.6e-122 442.6 422 53.6
SalBow5G2373 Salvia bowleyana HOM05D006228 ORTHO05D007847 3.6e-122 442.6 403 56.3
Sp4g22220 Schrenkiella parvula HOM05D006228 ORTHO05D007847 6.1e-122 441.8 423 53.4
A03p22360 Brassica napus HOM05D006228 ORTHO05D007847 8.0e-122 441.4 417 54.4
C03p26500 Brassica napus HOM05D006228 ORTHO05D007847 1.8e-121 440.3 424 53.8
Phvul.001G239600 Phaseolus vulgaris HOM05D006228 ORTHO05D007847 2.3e-121 439.9 419 55.8
BolC3t15036H Brassica oleracea HOM05D006228 ORTHO05D007847 2.0e-120 436.8 415 54.2
Carub.0004s2204 Capsella rubella HOM05D006228 ORTHO05D007847 2.0e-120 436.8 431 53.6
CARHR134830 Cardamine hirsuta HOM05D006228 ORTHO05D007847 5.7e-120 435.3 420 54.5
Zm00001eb226270 Zea mays HOM05D006228 ORTHO05D007847 7.5e-120 434.9 421 53.0
PSO585G0034 Papaver somniferum HOM05D006228 ORTHO05D007847 6.3e-119 431.8 303 69.0
Sc11g0007370 Simmondsia chinensis HOM05D006228 ORTHO05D007847 8.3e-119 431.4 362 60.8
MELO3C025144.2 Cucumis melo HOM05D006228 ORTHO05D007847 2.4e-118 429.9 450 52.2
BcaC01g05454 Brassica carinata HOM05D006228 ORTHO05D007847 3.1e-118 429.5 423 52.7
Duzib106G2031 Durio zibethinus HOM05D006228 ORTHO05D007847 9.1e-118 427.9 418 53.8
Os06g0694100 Oryza sativa ssp. japonica HOM05D006228 ORTHO05D007847 2.7e-117 426.4 433 49.9
PGR044G0451 Punica granatum HOM05D006228 ORTHO05D007847 7.7e-117 424.9 446 52.2
BcaB01g03579 Brassica carinata HOM05D006228 ORTHO05D007847 1.0e-116 424.5 431 51.3
DCAR_011778 Daucus carota HOM05D006228 ORTHO05D007847 2.2e-116 423.3 436 52.5
Lsat_1_v5_gn_9_63220 Lactuca sativa HOM05D006228 ORTHO05D007847 1.6e-114 417.2 438 53.2
Ciclev10031701m.g Citrus clementina HOM05D006228 ORTHO05D007847 2.1e-114 416.8 419 53.7
Atru.chr12.264 Acer truncatum HOM05D006228 ORTHO05D007847 1.2e-109 401.0 375 57.1
SHI03521 Sapria himalayana HOM05D006228 ORTHO05D007847 3.5e-109 399.4 429 49.7
FAN10G3493 Fragaria x ananassa HOM05D006228 ORTHO05D007847 2.5e-107 393.3 425 50.8
Eucgr.J00246 Eucalyptus grandis HOM05D006228 ORTHO05D007847 4.7e-106 389.0 438 50.2
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 1.6e-101 374.0 339 55.8
arahy.Tifrunner.gnm1.ann1.PGVU2S Arachis hypogaea HOM05D006228 ORTHO05D007847 2.7e-101 373.2 355 56.6
SEGI_03712 Sequoiadendron giganteum HOM05D006228 ORTHO05D007847 5.9e-101 372.1 421 48.0
unitig_747.g21715 Utricularia gibba HOM05D006228 ORTHO05D007847 1.0e-92 344.7 429 45.0
FAN06G0021 Fragaria x ananassa HOM05D006228 ORTHO05D007847 1.3e-79 301.2 316 51.6
Cpa.g.sc19.228 Carica papaya HOM05D006228 ORTHO05D007847 1.6e-69 267.7 428 39.7
HPP92_018568 Vanilla planifolia HOM05D006228 ORTHO05D007847 2.3e-68 263.8 270 53.3
AagrBONN_evm.TU.Sc2ySwM_344.5121 Anthoceros agrestis HOM05D006228 ORTHO05D007847 1.7e-60 237.7 366 38.3
BcaC02g07378 Brassica carinata HOM05D006228 ORTHO05D007847 1.2e-56 224.9 252 49.6
QL08p062537 Quercus lobata HOM05D006228 ORTHO05D007847 3.4e-56 223.4 159 65.4
Mapoly0014s0032 Marchantia polymorpha HOM05D006228 ORTHO05D007847 4.5e-56 223.0 358 36.0
Sed0008304 Sechium edule HOM05D006228 ORTHO05D007847 6.4e-55 219.2 343 41.4
Pp3c11_8050 Physcomitrium patens HOM05D006228 ORTHO05D007847 3.2e-54 216.9 341 37.8
SMO273G0042 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 1.6e-53 214.5 248 41.9
Actinidia00930 Actinidia chinensis HOM05D006228 ORTHO05D007847 2.1e-53 214.2 155 66.5
BcaB06g29116 Brassica carinata HOM05D006228 ORTHO05D007847 7.9e-53 212.2 219 49.8
RcHm_v2.0_Chr2g0110551 Rosa chinensis HOM05D006228 ORTHO05D007847 1.1e-49 201.8 137 65.0
MSTRG.8975 Avicennia marina HOM05D006228 ORTHO05D007847 1.0e-47 195.3 216 55.1
HPP92_018569 Vanilla planifolia HOM05D006228 ORTHO05D007847 3.0e-44 183.7 147 57.1
Actinidia25353 Actinidia chinensis HOM05D006228 ORTHO05D007847 1.9e-43 181.0 160 58.8
RcHm_v2.0_Chr1g0339731 Rosa chinensis HOM05D006228 ORTHO05D007847 1.0e-36 158.7 137 56.2
SMO147G0063 Selaginella moellendorffii HOM05D006228 ORTHO05D007847 8.7e-36 155.6 248 34.3
BolC4t28269H Brassica oleracea HOM05D006228 ORTHO05D007847 6.9e-33 146.0 165 49.1
Cre01.g048600 Chlamydomonas reinhardtii HOM05D006228 ORTHO05D007847 3.9e-20 103.6 201 28.9
MCO16G020 Micromonas commoda HOM05D006228 ORTHO05D007847 4.8e-18 96.7 260 23.1
arahy.Tifrunner.gnm1.ann1.DSNI2G Arachis hypogaea HOM05D002669 ORTHO05D003001 1.6e-16 91.7 65 61.5
arahy.Tifrunner.gnm1.ann1.YTZ5F3 Arachis hypogaea HOM05D006228 ORTHO05D007847 2.0e-16 91.3 65 63.1
C04p67680 Brassica napus HOM05D006228 ORTHO05D007847 6.7e-12 76.3 108 40.7
PRCOL_00002967 Prasinoderma coloniale HOM05D006228 ORTHO05D007847 2.8e-10 70.9 175 28.0


User provided reference genes

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