Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g08143_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 3.7e-61 238.0 122 100.0
Nn4g26368 Nelumbo nucifera HOM05D005612 ORTHO05D007014 6.2e-32 141.0 113 67.3
GSVIVG01027677001 Vitis vinifera HOM05D005612 ORTHO05D007014 1.2e-30 136.7 116 60.3
TAR375G1134 Trochodendron aralioides HOM05D005612 ORTHO05D007014 2.2e-29 132.5 113 62.8
Cpa.g.sc18.108 Carica papaya HOM05D005612 ORTHO05D007014 1.9e-28 129.4 114 59.6
Aqoxy1G04104 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 2.4e-28 129.0 113 58.4
Aqoxy3G02061 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 3.2e-28 128.6 113 57.5
Ciclev10010228m.g Citrus clementina HOM05D005612 ORTHO05D007014 3.2e-28 128.6 113 61.1
Prupe.6G155400 Prunus persica HOM05D005612 ORTHO05D007014 2.7e-27 125.6 113 56.6
CiPaw.01G263000 Carya illinoinensis HOM05D005612 ORTHO05D007014 7.8e-27 124.0 113 61.1
Atru.chr2.2479 Acer truncatum HOM05D005612 ORTHO05D007014 3.0e-26 122.1 113 58.4
CSS0047351 Camellia sinensis var. sinensis HOM05D005612 ORTHO05D007014 3.0e-26 122.1 113 53.1
Cfa015219 Carpinus fangiana HOM05D005612 ORTHO05D007014 1.5e-25 119.8 116 58.6
Dinv43696 Davidia involucrata HOM05D005612 ORTHO05D007014 2.5e-25 119.0 113 60.2
Manes.05G046700 Manihot esculenta HOM05D005612 ORTHO05D007014 2.5e-25 119.0 101 60.4
Haze_16797 Corylus avellana HOM05D005612 ORTHO05D007014 3.3e-25 118.6 113 58.4
MELO3C006197.2 Cucumis melo HOM05D005612 ORTHO05D007014 4.3e-25 118.2 114 57.0
Sc16g0011470 Simmondsia chinensis HOM05D005612 ORTHO05D007014 4.3e-25 118.2 113 57.5
TWI14G1300 Tripterygium wilfordii HOM05D005612 ORTHO05D007014 5.6e-25 117.9 113 54.0
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 7.3e-25 117.5 113 56.6
CsaV3_3G009760 Cucumis sativus L. HOM05D005612 ORTHO05D007014 1.3e-24 116.7 99 60.6
QL08p052678 Quercus lobata HOM05D005612 ORTHO05D007014 1.3e-24 116.7 115 57.4
Gorai.004G162600 Gossypium raimondii HOM05D005612 ORTHO05D007014 2.1e-24 115.9 100 61.0
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 2.1e-24 115.9 113 60.2
Potri.014G068500 Populus trichocarpa HOM05D005612 ORTHO05D007014 3.6e-24 115.2 114 57.0
Hund07502 Selenicereus undatus HOM05D005612 ORTHO05D007014 3.6e-24 115.2 114 55.3
Manes.01G266600 Manihot esculenta HOM05D005612 ORTHO05D007014 4.8e-24 114.8 101 56.4
Peaxi162Scf00045g01936 Petunia axillaris HOM05D005612 ORTHO05D007014 8.1e-24 114.0 100 59.0
vmacro13411 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 8.1e-24 114.0 113 55.8
Cc02_g24020 Coffea canephora HOM05D005612 ORTHO05D007014 1.1e-23 113.6 108 57.4
ECA236G2759 Erigeron canadensis HOM05D005612 ORTHO05D007014 1.1e-23 113.6 110 53.6
Nitab4.5_0000264g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 1.1e-23 113.6 110 55.5
Sabra14G0048200 Salix brachista HOM05D005612 ORTHO05D007014 1.1e-23 113.6 113 55.8
Eucgr.E01443 Eucalyptus grandis HOM05D005612 ORTHO05D007014 2.4e-23 112.5 113 55.8
TPR.G17234 Trifolium pratense HOM05D005612 ORTHO05D007014 2.4e-23 112.5 102 63.7
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 5.3e-23 111.3 113 53.1
Gohir.D08G156300 Gossypium hirsutum HOM05D005612 ORTHO05D007014 5.3e-23 111.3 131 50.4
Sed0014004 Sechium edule HOM05D005612 ORTHO05D007014 5.3e-23 111.3 113 55.8
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 6.9e-23 110.9 101 56.4
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea HOM05D005612 ORTHO05D007014 9.0e-23 110.5 110 55.5
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 9.0e-23 110.5 113 58.4
THA.LOC104827614 Tarenaya hassleriana HOM05D005612 ORTHO05D007014 1.2e-22 110.2 115 50.4
MSTRG.17178 Avicennia marina HOM05D005612 ORTHO05D007014 1.5e-22 109.8 116 53.4
Lj3g0004128 Lotus japonicus HOM05D005612 ORTHO05D007014 1.5e-22 109.8 115 56.5
CAN.G530.1 Capsicum annuum HOM05D005612 ORTHO05D007014 2.0e-22 109.4 115 49.6
Medtr4g053430 Medicago truncatula HOM05D005612 ORTHO05D007014 2.6e-22 109.0 96 63.5
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea HOM05D005612 ORTHO05D007014 3.4e-22 108.6 110 55.5
Lalb_Chr03g0039601 Lupinus albus HOM05D005612 ORTHO05D007014 3.4e-22 108.6 100 59.0
Solyc08g006610.3 Solanum lycopersicum HOM05D005612 ORTHO05D007014 3.4e-22 108.6 110 53.6
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 3.4e-22 108.6 110 53.6
Ca_19396_v3 Cicer arietinum L. HOM05D005612 ORTHO05D007014 4.4e-22 108.2 102 60.8
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 4.4e-22 108.2 113 53.1
Sopen08g002560 Solanum pennellii HOM05D005612 ORTHO05D007014 5.8e-22 107.8 110 53.6
Lsat_1_v5_gn_8_86120 Lactuca sativa HOM05D005612 ORTHO05D007014 9.9e-22 107.1 112 53.6
Psat0s2995g0040 Pisum sativum HOM05D005612 ORTHO05D007014 9.9e-22 107.1 96 62.5
CANSAT01G1400 Cannabis sativa HOM05D005612 ORTHO05D007014 1.3e-21 106.7 113 55.8
DCAR_008555 Daucus carota HOM05D005612 ORTHO05D007014 1.3e-21 106.7 113 50.4
Lj7C530T5 Lonicera japonica HOM05D005612 ORTHO05D007014 1.7e-21 106.3 113 48.7
Phvul.011G138100 Phaseolus vulgaris HOM05D005612 ORTHO05D007014 1.7e-21 106.3 113 53.1
PGR042G0232 Punica granatum HOM05D005612 ORTHO05D007014 1.7e-21 106.3 102 58.8
Carub.0004s2795 Capsella rubella HOM05D005612 ORTHO05D007014 2.9e-21 105.5 104 51.0
AUR62000130 Chenopodium quinoa HOM05D005612 ORTHO05D007014 2.9e-21 105.5 113 52.2
EL10Ac4g10240 Beta vulgaris HOM05D005612 ORTHO05D007014 4.9e-21 104.8 114 53.5
PSO339G2081 Papaver somniferum HOM05D005612 ORTHO05D007014 4.9e-21 104.8 100 55.0
MD00G1094900 Malus domestica HOM05D005612 ORTHO05D007014 6.4e-21 104.4 122 54.9
Gohir.A08G135200 Gossypium hirsutum HOM05D005612 ORTHO05D007014 8.4e-21 104.0 93 59.1
Gohir.A08G135500 Gossypium hirsutum HOM05D005612 ORTHO05D007014 8.4e-21 104.0 93 59.1
Gohir.A08G135550 Gossypium hirsutum HOM05D005612 ORTHO05D007014 8.4e-21 104.0 93 59.1
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 1.1e-20 103.6 113 51.3
Migut.B01623 Erythranthe guttata HOM05D005612 ORTHO05D007014 1.1e-20 103.6 114 49.1
Oeu055499.1 Olea europaea HOM05D005612 ORTHO05D007014 1.1e-20 103.6 110 49.1
Lalb_Chr01g0021461 Lupinus albus HOM05D005612 ORTHO05D007014 1.4e-20 103.2 109 52.3
PSO384G4101 Papaver somniferum HOM05D005612 ORTHO05D007014 2.4e-20 102.4 100 54.0
SalBow5G3218 Salvia bowleyana HOM05D005612 ORTHO05D007014 2.4e-20 102.4 120 49.2
Glyma.12G134000 Glycine max HOM05D005612 ORTHO05D007014 3.2e-20 102.1 113 54.0
Thecc.01G378200 Theobroma cacao HOM05D005612 ORTHO05D007014 3.2e-20 102.1 121 47.9
Glyma.06G270700 Glycine max HOM05D005612 ORTHO05D007014 9.3e-20 100.5 113 54.0
AT2G45320 Arabidopsis thaliana HOM05D005612 ORTHO05D007014 1.2e-19 100.1 96 55.2
FAN28G0581 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.2e-19 100.1 119 48.7
Duzib138G1608 Durio zibethinus HOM05D005612 ORTHO05D007014 1.6e-19 99.8 93 58.1
FvH4_1g28100 Fragaria vesca HOM05D005612 ORTHO05D007014 1.6e-19 99.8 121 47.1
CARHR140530 Cardamine hirsuta HOM05D005612 ORTHO05D007014 2.1e-19 99.4 103 50.5
CDE07G1659 Ceratophyllum demersum HOM05D005612 ORTHO05D007014 3.5e-19 98.6 113 46.9
Thhalv10001485m.g Eutrema salsugineum HOM05D005612 ORTHO05D007014 4.6e-19 98.2 107 49.5
AL4G44420 Arabidopsis lyrata HOM05D005612 ORTHO05D007014 7.9e-19 97.4 96 54.2
RcHm_v2.0_Chr3g0497141 Rosa chinensis HOM05D005612 ORTHO05D007014 1.3e-18 96.7 115 51.3
FAN23G2738 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.7e-18 96.3 119 47.1
FAN28G2973 Fragaria x ananassa HOM05D005612 ORTHO05D007014 3.0e-18 95.5 119 47.1
unitig_749.g14376 Utricularia gibba HOM05D005612 ORTHO05D007014 3.0e-18 95.5 120 47.5
Zm00001eb195050 Zea mays HOM05D005612 ORTHO05D007014 5.6e-17 91.3 96 55.2
Sp4g27340 Schrenkiella parvula HOM05D005612 ORTHO05D007014 7.3e-17 90.9 111 47.7
ATR1100G025 Amborella trichopoda HOM05D005612 ORTHO05D007014 1.6e-16 89.7 103 50.5
BcaB01g03271 Brassica carinata HOM05D005612 ORTHO05D007014 1.6e-16 89.7 98 50.0
HanXRQChr04g0122751 Helianthus annuus HOM05D005612 ORTHO05D007014 1.6e-16 89.7 113 48.7
FAN26G0204 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.1e-16 89.4 141 40.4
A03p25180 Brassica napus HOM05D005612 ORTHO05D007014 6.2e-16 87.8 97 46.4
BraA03t11718Z Brassica rapa HOM05D005612 ORTHO05D007014 6.2e-16 87.8 96 47.9
vmacro21020 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 8.1e-16 87.4 110 44.5
BcaC01g05140 Brassica carinata HOM05D005612 ORTHO05D007014 3.4e-14 82.0 97 46.4
BolC3t15349H Brassica oleracea HOM05D005612 ORTHO05D007014 3.4e-14 82.0 97 46.4
C03p30020 Brassica napus HOM05D005612 ORTHO05D007014 7.6e-14 80.9 97 47.4
Os06g0571300 Oryza sativa ssp. japonica HOM05D005612 ORTHO05D007014 6.4e-13 77.8 93 53.8
CiPaw.09G176500 Carya illinoinensis HOM05D005612 ORTHO05D007014 2.4e-12 75.9 73 54.8
Medtr8g102042 Medicago truncatula HOM05D005612 ORTHO05D007014 5.4e-12 74.7 63 63.5
Nitab4.5_0005450g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 9.3e-12 73.9 73 53.4
SEGI_33395 Sequoiadendron giganteum HOM05D005612 ORTHO05D007014 1.2e-11 73.6 96 44.8
unitig_76.g29085 Utricularia gibba HOM05D005612 ORTHO05D007014 5.1e-10 68.2 120 39.2
Dinv32369 Davidia involucrata HOM05D005612 ORTHO05D007014 1.9e-09 66.2 73 53.4
SGA_v2.0_scaffold153G37000 Striga asiatica HOM05D005612 ORTHO05D007014 6.9e-07 57.8 73 46.6


User provided reference genes

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