Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 3.7e-154 548.1 270 100.0
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 5.3e-76 288.5 196 67.9
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 5.3e-76 288.5 204 66.2
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 1.5e-75 287.0 207 66.7
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 7.7e-75 284.6 204 65.7
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 7.7e-75 284.6 200 65.0
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.3e-74 283.9 196 69.4
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 3.8e-74 282.3 196 66.3
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 5.0e-74 282.0 196 67.3
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 5.0e-74 282.0 198 66.7
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 6.5e-74 281.6 200 66.5
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 6.5e-74 281.6 196 67.3
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 8.5e-74 281.2 196 68.9
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 1.1e-73 280.8 196 67.3
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 1.1e-73 280.8 204 66.7
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.1e-73 280.8 196 68.4
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 1.1e-73 280.8 202 67.8
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 1.9e-73 280.0 195 66.2
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 3.2e-73 279.3 196 66.8
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 4.2e-73 278.9 196 68.9
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 4.2e-73 278.9 189 69.8
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 5.5e-73 278.5 209 62.2
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 7.2e-73 278.1 202 62.4
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 1.2e-72 277.3 201 66.7
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 1.2e-72 277.3 195 68.2
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 1.2e-72 277.3 204 64.7
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 1.6e-72 276.9 196 65.8
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 3.6e-72 275.8 197 65.5
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 3.6e-72 275.8 196 67.3
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 3.6e-72 275.8 194 64.9
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 3.6e-72 275.8 204 61.3
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 4.7e-72 275.4 200 65.0
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 6.1e-72 275.0 204 63.2
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 6.1e-72 275.0 198 66.2
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 7.9e-72 274.6 196 65.8
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 7.9e-72 274.6 200 66.5
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 1.4e-71 273.9 195 67.2
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 1.4e-71 273.9 198 64.1
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.8e-71 273.5 196 65.8
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 2.3e-71 273.1 198 65.7
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 3.0e-71 272.7 196 67.3
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 3.9e-71 272.3 204 63.7
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 3.9e-71 272.3 196 65.8
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 5.1e-71 271.9 198 64.6
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 6.7e-71 271.6 195 65.6
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 1.1e-70 270.8 198 63.1
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 4.4e-70 268.9 196 65.8
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 5.7e-70 268.5 196 63.8
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 5.7e-70 268.5 200 63.0
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 9.7e-70 267.7 196 64.3
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 9.7e-70 267.7 196 62.2
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 1.3e-69 267.3 196 62.8
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 1.7e-69 266.9 196 64.3
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 2.2e-69 266.5 196 64.3
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 2.8e-69 266.2 196 63.3
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 4.8e-69 265.4 181 70.2
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 8.2e-69 264.6 196 63.3
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 8.2e-69 264.6 200 63.0
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 1.8e-68 263.5 193 65.8
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 2.4e-68 263.1 196 64.8
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 3.1e-68 262.7 200 61.0
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 5.3e-68 261.9 177 71.2
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 7.0e-68 261.5 194 64.9
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 9.1e-68 261.2 196 63.8
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 9.1e-68 261.2 184 65.8
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 1.2e-67 260.8 196 63.8
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 1.2e-67 260.8 195 64.6
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 3.5e-67 259.2 178 69.7
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 4.5e-67 258.8 187 67.9
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 4.5e-67 258.8 184 65.8
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 4.5e-67 258.8 184 65.8
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 4.5e-67 258.8 196 62.2
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 4.5e-67 258.8 196 63.8
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 7.7e-67 258.1 196 60.2
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 7.7e-67 258.1 184 65.2
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 1.0e-66 257.7 189 66.1
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 1.3e-66 257.3 196 61.2
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 2.2e-66 256.5 196 60.7
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 2.9e-66 256.1 198 61.1
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 2.9e-66 256.1 196 60.7
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 2.9e-66 256.1 204 59.8
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 3.8e-66 255.8 196 60.7
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 5.0e-66 255.4 196 60.7
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 6.5e-66 255.0 196 61.2
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 1.1e-65 254.2 195 63.1
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 1.9e-65 253.4 196 61.7
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 2.5e-65 253.1 196 64.3
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 3.2e-65 252.7 196 60.2
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 4.2e-65 252.3 196 63.8
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 5.5e-65 251.9 196 60.2
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 5.5e-65 251.9 205 60.5
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 7.2e-65 251.5 205 60.0
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 9.4e-65 251.1 184 65.2
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 1.2e-64 250.8 195 61.0
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.2e-64 250.8 196 59.7
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 2.1e-64 250.0 192 65.1
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 2.7e-64 249.6 197 63.5
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 3.6e-64 249.2 199 59.3
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 3.6e-64 249.2 196 60.2
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 4.7e-64 248.8 195 60.0
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 6.1e-64 248.4 196 60.7
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 8.0e-64 248.1 196 60.2
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 1.0e-63 247.7 196 60.2
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 1.4e-63 247.3 184 63.6
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 2.3e-63 246.5 196 60.7
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 4.0e-63 245.7 196 61.7
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 5.2e-63 245.4 196 57.7
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 2.6e-62 243.0 196 60.2
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 2.6e-62 243.0 196 59.7
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 5.7e-62 241.9 189 64.6
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 5.7e-62 241.9 185 63.2
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 7.4e-62 241.5 176 61.9
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 1.4e-60 237.3 202 58.9
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.8e-60 236.9 190 60.0
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 1.8e-60 236.9 162 71.0
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 7.0e-60 235.0 187 63.6
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 1.6e-59 233.8 196 59.7
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 4.5e-59 232.3 179 64.8
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 1.3e-58 230.7 193 59.6
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 5.0e-58 228.8 178 59.0
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 4.2e-57 225.7 181 58.0
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 4.7e-56 222.2 142 71.8
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 8.0e-56 221.5 142 69.7
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 1.0e-55 221.1 142 71.8
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 8.3e-53 211.5 142 69.7
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 9.1e-52 208.0 191 53.4
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 2.7e-51 206.5 185 54.1
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 1.7e-50 203.8 156 62.8
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 6.8e-47 191.8 176 52.8
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 4.4e-46 189.1 112 73.2
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 5.7e-46 188.7 157 59.9
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.7e-45 187.2 197 51.3
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 3.6e-40 169.5 95 74.7
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 2.0e-38 163.7 190 45.3
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 2.6e-38 163.3 126 67.5
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 1.1e-36 157.9 191 44.5
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 2.5e-33 146.7 196 43.9
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 4.0e-31 139.4 182 47.8
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 2.0e-27 127.1 189 39.7
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 1.4e-23 114.4 72 66.7
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 2.9e-21 106.7 183 36.6
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 1.1e-20 104.8 117 46.2
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 4.1e-20 102.8 107 49.5
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 2.7e-19 100.1 112 49.1
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 2.5e-17 93.6 111 46.8
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 9.5e-17 91.7 101 48.5
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 1.2e-16 91.3 144 39.6
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 2.1e-16 90.5 71 54.9
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 1.3e-13 81.3 190 33.7
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 3.7e-13 79.7 53 69.8


User provided reference genes

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