Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 9.1e-40 166.4 81 100.0
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 8.3e-25 116.7 75 70.7
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.9e-17 90.9 85 50.6
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 2.4e-16 88.6 85 50.6
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 5.4e-16 87.4 86 51.2
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 9.2e-16 86.7 85 49.4
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 1.2e-15 86.3 85 48.2
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 1.0e-14 83.2 84 48.8
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 1.0e-14 83.2 86 51.2
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 1.0e-14 83.2 80 50.0
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.3e-14 82.8 76 48.7
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.3e-14 82.8 76 48.7
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 1.3e-14 82.8 76 48.7
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 1.7e-14 82.4 84 48.8
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 1.7e-14 82.4 76 51.3
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 1.7e-14 82.4 87 44.8
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 2.3e-14 82.0 84 46.4
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 2.3e-14 82.0 86 45.3
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 3.9e-14 81.3 79 49.4
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 3.9e-14 81.3 85 49.4
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 3.9e-14 81.3 77 49.4
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 3.9e-14 81.3 88 46.6
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 3.9e-14 81.3 84 46.4
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 5.0e-14 80.9 85 45.9
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 5.0e-14 80.9 84 46.4
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 6.6e-14 80.5 86 45.3
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 6.6e-14 80.5 86 45.3
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 6.6e-14 80.5 77 49.4
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 6.6e-14 80.5 86 45.3
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 8.6e-14 80.1 85 44.7
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 8.6e-14 80.1 79 49.4
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 8.6e-14 80.1 84 47.6
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 8.6e-14 80.1 85 49.4
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 1.5e-13 79.3 84 45.2
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 1.5e-13 79.3 85 42.4
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 1.5e-13 79.3 76 48.7
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 1.9e-13 79.0 84 44.0
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 1.9e-13 79.0 85 41.2
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 2.5e-13 78.6 85 49.4
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 2.5e-13 78.6 84 46.4
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 2.5e-13 78.6 83 45.8
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 2.5e-13 78.6 85 43.5
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 3.3e-13 78.2 85 44.7
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 3.3e-13 78.2 85 47.1
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 3.3e-13 78.2 85 47.1
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 3.3e-13 78.2 85 47.1
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 3.3e-13 78.2 83 47.0
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 3.3e-13 78.2 83 45.8
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 3.3e-13 78.2 85 50.6
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 4.3e-13 77.8 83 45.8
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 4.3e-13 77.8 77 44.2
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 5.6e-13 77.4 83 44.6
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 5.6e-13 77.4 83 44.6
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 5.6e-13 77.4 83 45.8
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 7.3e-13 77.0 85 45.9
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 7.3e-13 77.0 82 45.1
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 9.5e-13 76.6 84 46.4
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 9.5e-13 76.6 84 45.2
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 1.2e-12 76.3 82 46.3
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 1.2e-12 76.3 85 44.7
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 1.2e-12 76.3 85 43.5
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 1.2e-12 76.3 82 47.6
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 1.6e-12 75.9 83 43.4
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 1.6e-12 75.9 84 45.2
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 1.6e-12 75.9 82 46.3
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 1.6e-12 75.9 84 46.4
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 1.6e-12 75.9 83 44.6
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 1.6e-12 75.9 84 44.0
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 2.1e-12 75.5 85 45.9
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 2.8e-12 75.1 89 40.4
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 2.8e-12 75.1 87 41.4
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 2.8e-12 75.1 82 45.1
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 2.8e-12 75.1 77 42.9
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 3.6e-12 74.7 86 45.3
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 3.6e-12 74.7 84 45.2
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 3.6e-12 74.7 85 42.4
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 4.7e-12 74.3 84 44.0
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 6.2e-12 73.9 84 42.9
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 6.2e-12 73.9 85 42.4
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 8.1e-12 73.6 90 40.0
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 8.1e-12 73.6 91 40.7
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 8.1e-12 73.6 84 44.0
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 1.1e-11 73.2 84 44.0
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 1.1e-11 73.2 84 41.7
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.4e-11 72.8 82 45.1
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 1.4e-11 72.8 87 39.1
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 1.4e-11 72.8 87 39.1
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 1.8e-11 72.4 82 47.6
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 3.1e-11 71.6 82 46.3
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 6.8e-11 70.5 80 42.5
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 6.8e-11 70.5 84 44.0
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 8.9e-11 70.1 86 44.2
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 8.9e-11 70.1 82 43.9
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 8.9e-11 70.1 77 39.0
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 1.5e-10 69.3 86 41.9
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 2.0e-10 68.9 80 43.8
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 2.6e-10 68.6 85 40.0
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 2.6e-10 68.6 78 44.9
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 4.4e-10 67.8 85 41.2
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 2.2e-09 65.5 83 41.0
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 3.7e-09 64.7 75 45.3
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 2.4e-08 62.0 79 36.7
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 1.2e-07 59.7 69 47.8
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 6.0e-07 57.4 55 50.9
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 1.3e-06 56.2 44 47.7
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 1.7e-06 55.8 43 53.5
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 5.1e-06 54.3 78 37.2


User provided reference genes

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