Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 5.0e-67 257.7 134 100.0
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 2.6e-39 165.6 138 68.1
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 1.3e-38 163.3 138 67.4
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 1.1e-37 160.2 138 67.4
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 5.4e-37 157.9 138 64.5
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 7.0e-37 157.5 101 83.2
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 2.7e-36 155.6 90 86.7
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 3.5e-36 155.2 110 75.5
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 3.5e-36 155.2 110 75.5
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 4.6e-36 154.8 108 75.0
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 4.6e-36 154.8 85 88.2
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 1.0e-35 153.7 89 85.4
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 1.3e-35 153.3 134 66.4
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 1.3e-35 153.3 146 61.6
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 1.7e-35 152.9 135 67.4
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 2.3e-35 152.5 111 74.8
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 2.3e-35 152.5 111 74.8
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 2.3e-35 152.5 125 70.4
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 2.9e-35 152.1 99 76.8
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 2.9e-35 152.1 134 70.1
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 2.9e-35 152.1 89 86.5
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 3.9e-35 151.8 131 66.4
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 5.0e-35 151.4 142 61.3
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 6.6e-35 151.0 132 65.2
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 8.6e-35 150.6 91 81.3
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 8.6e-35 150.6 133 64.7
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 8.6e-35 150.6 90 82.2
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 8.6e-35 150.6 90 82.2
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 1.1e-34 150.2 96 78.1
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 1.1e-34 150.2 134 67.9
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 1.1e-34 150.2 137 66.4
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 1.1e-34 150.2 89 84.3
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 1.9e-34 149.4 88 84.1
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 1.9e-34 149.4 123 68.3
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 2.5e-34 149.1 128 65.6
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 3.3e-34 148.7 89 80.9
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 4.3e-34 148.3 86 86.0
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 4.3e-34 148.3 137 62.8
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 5.6e-34 147.9 134 64.9
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 7.3e-34 147.5 93 78.5
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 7.3e-34 147.5 128 65.6
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 9.5e-34 147.1 89 82.0
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 9.5e-34 147.1 139 62.6
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 1.2e-33 146.7 133 63.9
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 1.2e-33 146.7 90 80.0
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 1.6e-33 146.4 138 63.8
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 1.6e-33 146.4 89 80.9
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 1.6e-33 146.4 132 65.2
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 2.1e-33 146.0 90 80.0
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 2.1e-33 146.0 112 68.8
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 2.1e-33 146.0 123 63.4
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 2.1e-33 146.0 83 85.5
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 2.1e-33 146.0 89 79.8
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 2.8e-33 145.6 88 80.7
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 2.8e-33 145.6 88 80.7
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 3.6e-33 145.2 143 60.1
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 3.6e-33 145.2 83 86.7
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 3.6e-33 145.2 128 64.8
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 3.6e-33 145.2 90 78.9
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 4.7e-33 144.8 128 64.8
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 4.7e-33 144.8 136 61.8
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 6.2e-33 144.4 137 63.5
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 1.0e-32 143.7 90 77.8
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 1.0e-32 143.7 117 67.5
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.4e-32 143.3 143 60.8
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.4e-32 143.3 140 62.1
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 1.4e-32 143.3 138 59.4
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 1.8e-32 142.9 138 61.6
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 1.8e-32 142.9 134 61.9
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 2.3e-32 142.5 133 63.2
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 2.3e-32 142.5 84 81.0
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 3.1e-32 142.1 132 62.9
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 4.0e-32 141.7 91 78.0
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 4.0e-32 141.7 146 58.2
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 5.2e-32 141.4 108 70.4
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 5.2e-32 141.4 133 61.7
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 8.9e-32 140.6 83 81.9
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 1.2e-31 140.2 111 67.6
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 1.2e-31 140.2 159 54.7
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 1.5e-31 139.8 91 76.9
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 2.6e-31 139.0 140 59.3
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 3.4e-31 138.7 135 60.7
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 4.4e-31 138.3 133 60.9
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 4.4e-31 138.3 132 62.1
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 5.8e-31 137.9 130 60.8
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 5.8e-31 137.9 137 59.1
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 7.5e-31 137.5 82 81.7
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 7.5e-31 137.5 133 60.2
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 7.5e-31 137.5 133 60.2
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 9.8e-31 137.1 132 60.6
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 9.8e-31 137.1 130 60.0
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 2.9e-30 135.6 82 79.3
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 4.9e-30 134.8 90 71.1
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 4.9e-30 134.8 129 60.5
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.4e-29 132.5 121 59.5
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 4.1e-29 131.7 130 59.2
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 7.8e-28 127.5 134 53.7
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 6.6e-27 124.4 112 65.2
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 8.6e-27 124.0 87 67.8
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 2.5e-26 122.5 122 59.0
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 4.0e-24 115.2 137 51.1
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 6.8e-24 114.4 89 67.4
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 2.2e-22 109.4 100 65.0
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 1.5e-15 86.7 85 55.3
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 5.8e-15 84.7 46 82.6
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 2.0e-07 59.7 90 47.8


User provided reference genes

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