Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 2.8e-75 285.4 170 100.0
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.5e-39 166.8 139 68.3
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 6.2e-38 161.4 144 65.3
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 6.2e-38 161.4 144 65.3
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 1.6e-33 146.7 139 65.5
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 1.9e-31 139.8 144 59.0
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 2.5e-31 139.4 142 57.7
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 5.6e-31 138.3 138 61.6
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 8.1e-30 134.4 148 59.5
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 2.3e-29 132.9 105 70.5
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 4.0e-29 132.1 138 58.7
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 2.0e-28 129.8 151 56.3
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 4.4e-28 128.6 135 59.3
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 1.3e-27 127.1 147 56.5
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 1.3e-27 127.1 147 56.5
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 1.3e-27 127.1 147 56.5
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 2.2e-27 126.3 149 54.4
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.4e-26 123.6 143 55.2
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 1.9e-26 123.2 152 54.6
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 3.2e-26 122.5 158 52.5
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 9.2e-26 120.9 135 58.5
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 9.2e-26 120.9 140 56.4
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.2e-25 120.6 116 63.8
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.6e-25 120.2 143 54.5
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 2.1e-25 119.8 146 53.4
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 2.1e-25 119.8 146 53.4
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 2.7e-25 119.4 162 55.6
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 6.0e-25 118.2 140 54.3
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 6.0e-25 118.2 114 64.0
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 7.8e-25 117.9 90 72.2
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 1.3e-24 117.1 140 54.3
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 1.7e-24 116.7 147 50.3
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 2.3e-24 116.3 148 51.4
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 3.0e-24 115.9 121 64.5
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 3.9e-24 115.5 129 55.0
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 3.9e-24 115.5 121 62.0
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 1.5e-23 113.6 131 55.7
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 1.5e-23 113.6 114 63.2
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 1.9e-23 113.2 145 54.5
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 3.3e-23 112.5 160 48.8
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 4.3e-23 112.1 145 51.0
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 4.3e-23 112.1 147 55.1
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 5.6e-23 111.7 140 54.3
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 7.3e-23 111.3 139 56.8
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 9.6e-23 110.9 91 69.2
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 9.6e-23 110.9 148 52.7
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 1.2e-22 110.5 142 54.9
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 1.2e-22 110.5 142 53.5
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 1.2e-22 110.5 143 52.4
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 1.2e-22 110.5 152 53.3
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.6e-22 110.2 145 55.2
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 2.8e-22 109.4 153 51.6
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 6.2e-22 108.2 131 54.2
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 8.1e-22 107.8 128 53.9
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.4e-21 107.1 106 67.0
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 1.8e-21 106.7 142 51.4
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 4.0e-21 105.5 151 50.3
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 5.2e-21 105.1 151 51.0
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 5.2e-21 105.1 142 51.4
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 2.6e-20 102.8 127 51.2
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.6e-20 102.8 113 60.2
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 9.9e-20 100.9 144 50.0
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 4.9e-19 98.6 128 50.8
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 4.9e-19 98.6 165 44.8
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 6.4e-19 98.2 153 45.8
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 1.1e-18 97.4 115 53.9
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 1.4e-18 97.1 124 54.0
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.4e-18 97.1 119 52.9
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.4e-18 97.1 119 52.9
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 1.9e-18 96.7 145 47.6
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 1.9e-18 96.7 136 50.0
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 3.2e-18 95.9 115 55.7
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 3.2e-18 95.9 145 49.7
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 1.6e-17 93.6 144 50.0
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 2.1e-17 93.2 144 45.1
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 4.6e-17 92.0 71 71.8
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 7.8e-17 91.3 132 48.5
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 7.8e-17 91.3 123 50.4
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 7.8e-17 91.3 147 49.0
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 1.0e-16 90.9 147 50.3
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 1.3e-16 90.5 74 71.6
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 1.3e-16 90.5 74 71.6
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 1.3e-16 90.5 67 74.6
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 2.3e-16 89.7 138 43.5
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 3.0e-16 89.4 142 43.0
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 1.1e-15 87.4 73 69.9
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 1.1e-15 87.4 73 69.9
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 1.1e-15 87.4 73 69.9
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 1.1e-15 87.4 133 50.4
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 5.6e-15 85.1 118 55.1
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 5.6e-15 85.1 141 41.8
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 1.6e-14 83.6 106 52.8
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 2.1e-14 83.2 133 45.9
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 4.8e-14 82.0 105 51.4
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 3.1e-13 79.3 74 64.9
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 4.0e-13 79.0 91 49.5
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 4.5e-12 75.5 156 38.5
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.7e-11 73.6 106 45.3
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 8.4e-11 71.2 69 58.0
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 1.2e-09 67.4 149 40.3
Zm00001eb299600 Zea mays HOM05D016300 ORTHO05D008639 5.6e-07 58.5 65 49.2
Zm00001eb299620 Zea mays HOM05D016300 ORTHO05D008639 5.6e-07 58.5 65 49.2
Zm00001eb440750 Zea mays HOM05D016300 ORTHO05D008639 5.6e-07 58.5 65 49.2
Mapoly0102s0035 Marchantia polymorpha HOM05D007264 ORTHO05D008639 2.8e-06 56.2 76 42.1
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 6.2e-06 55.1 112 39.3
Potri.009G034951 Populus trichocarpa HOM05D007264 ORTHO05D008639 8.1e-06 54.7 60 55.0


User provided reference genes

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