Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 1.3e-252 875.9 454 100.0
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 2.0e-131 473.4 439 62.6
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 4.7e-125 452.2 436 57.3
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 3.0e-116 422.9 406 59.1
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 9.8e-115 417.9 395 59.5
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 4.8e-114 415.6 437 55.1
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 1.1e-113 414.5 406 56.4
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 9.1e-113 411.4 387 60.7
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 2.9e-111 406.4 403 54.3
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 8.6e-111 404.8 438 54.8
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 5.5e-110 402.1 433 54.3
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 9.5e-110 401.4 445 55.5
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 1.6e-109 400.6 431 56.1
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 2.3e-108 396.7 394 56.3
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 6.8e-108 395.2 386 57.5
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 1.2e-107 394.4 398 57.8
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 2.0e-107 393.7 397 57.4
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 5.7e-107 392.1 425 55.1
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 1.8e-105 387.1 434 52.1
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 1.8e-105 387.1 430 52.3
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 2.4e-105 386.7 439 53.5
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 3.1e-105 386.3 398 55.5
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 4.1e-105 386.0 436 52.8
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 5.4e-105 385.6 421 53.0
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 9.2e-105 384.8 431 53.6
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.2e-104 384.4 439 52.6
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 1.2e-104 384.4 431 52.7
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 4.5e-104 382.5 425 54.1
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 5.9e-104 382.1 434 51.6
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 1.0e-103 381.3 442 52.7
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 1.7e-103 380.6 419 52.3
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 8.6e-103 378.3 420 51.7
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 8.6e-103 378.3 450 52.2
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 8.6e-103 378.3 401 54.4
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 1.9e-102 377.1 386 55.2
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 3.3e-102 376.3 390 56.2
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 7.3e-102 375.2 421 52.3
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 9.5e-102 374.8 398 54.0
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 4.0e-100 369.4 428 51.4
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 9.8e-99 364.8 395 53.4
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 1.3e-98 364.4 395 53.2
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 2.2e-98 363.6 414 52.9
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 4.9e-98 362.5 405 50.9
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 6.4e-98 362.1 414 51.4
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 6.4e-98 362.1 391 52.7
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 9.2e-97 358.2 410 52.2
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 3.9e-95 352.8 396 51.8
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 4.7e-93 345.9 436 47.5
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 6.2e-93 345.5 369 56.9
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 2.3e-92 343.6 392 50.8
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 5.2e-92 342.4 395 50.4
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 2.0e-91 340.5 391 49.4
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 2.0e-91 340.5 431 48.5
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 4.4e-91 339.3 435 46.9
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 4.4e-91 339.3 436 47.5
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 5.8e-91 339.0 394 50.8
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 5.8e-91 339.0 434 47.5
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 5.8e-91 339.0 435 47.6
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 9.8e-91 338.2 392 50.0
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 9.8e-91 338.2 425 47.8
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 6.4e-90 335.5 417 48.7
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 1.9e-89 334.0 392 49.5
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 3.2e-89 333.2 388 49.2
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 5.4e-89 332.4 393 49.4
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 1.2e-88 331.3 379 52.5
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 1.6e-88 330.9 414 51.0
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 4.6e-88 329.3 425 47.5
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 6.0e-88 328.9 373 53.1
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 7.8e-88 328.6 460 45.2
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 1.0e-87 328.2 409 46.5
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 2.3e-87 327.0 308 60.1
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 3.0e-87 326.6 471 45.9
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 8.6e-87 325.1 438 46.3
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 1.5e-86 324.3 406 47.5
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 3.6e-85 319.7 388 48.2
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 4.7e-85 319.3 394 49.0
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 4.0e-84 316.2 419 43.9
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 4.4e-83 312.8 322 56.5
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 1.9e-81 307.4 439 43.7
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 1.3e-79 301.2 432 42.6
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 2.3e-79 300.4 430 43.3
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 3.0e-79 300.1 414 45.2
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 3.9e-79 299.7 365 49.0
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 3.1e-76 290.0 429 43.6
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 3.2e-73 280.0 340 52.1
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 9.2e-73 278.5 338 51.5
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 3.5e-72 276.6 249 55.4
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 1.0e-71 275.0 361 46.8
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 3.6e-69 266.5 303 52.8
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 4.0e-68 263.1 216 64.4
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 5.3e-68 262.7 394 41.4
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 5.8e-67 259.2 497 37.6
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 4.6e-64 249.6 335 44.5
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.6e-61 241.1 200 62.0
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 4.5e-59 233.0 334 44.0
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 7.1e-57 225.7 290 45.2
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 2.7e-56 223.8 434 36.4
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 4.6e-56 223.0 344 43.6
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 5.3e-52 209.5 386 40.2
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 5.1e-47 193.0 371 35.0
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 4.8e-45 186.4 409 31.8
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 3.4e-43 180.3 391 35.3
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 1.7e-42 177.9 208 46.6
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 1.1e-41 175.3 391 34.8
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 4.8e-37 159.8 405 33.1
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 1.0e-34 152.1 269 36.4
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 7.2e-33 146.0 121 61.2
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 5.7e-30 136.3 172 48.8
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 1.0e-26 125.6 298 33.9
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 2.2e-26 124.4 411 29.4
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 2.7e-24 117.5 275 34.5
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 8.8e-23 112.5 104 57.7
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 1.4e-20 105.1 94 56.4
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 1.8e-20 104.8 129 50.4
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 2.0e-14 84.7 82 58.5
TPR.G40448 Trifolium pratense HOM05D006045 ORTHO05D007678 2.0e-06 58.2 58 46.6
Medtr7g062690 Medicago truncatula HOM05D006045 ORTHO05D007678 2.6e-06 57.8 72 43.1
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 9.7e-06 55.8 101 33.7


User provided reference genes

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