Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g08019_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 2.0e-118 429.5 273 100.0
GSVIVG01031399001 Vitis vinifera HOM05D006297 ORTHO05D007873 6.9e-31 138.7 246 43.9
MBI05_g35633_MAGBIO Magnolia biondii HOM05D006297 ORTHO05D007873 1.4e-28 131.0 235 40.0
TAR369G0304 Trochodendron aralioides HOM05D006297 ORTHO05D007873 5.4e-28 129.0 240 40.4
Dinv34277 Davidia involucrata HOM05D006297 ORTHO05D007873 9.3e-28 128.3 241 43.2
Hma1.2p1_0615F.1_g189690 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 4.3e-25 119.4 235 40.4
Sabra09G0025100 Salix brachista HOM05D006297 ORTHO05D010418 4.8e-24 115.9 252 39.7
Actinidia33772 Actinidia chinensis HOM05D006297 ORTHO05D007873 5.8e-22 109.0 269 36.8
QL01p030412 Quercus lobata HOM05D006297 ORTHO05D007873 1.0e-21 108.2 296 37.5
Potri.009G035300 Populus trichocarpa HOM05D006297 ORTHO05D007873 2.2e-21 107.1 285 37.5
TWI79G0566 Tripterygium wilfordii HOM05D000001 ORTHO05D010418 6.5e-21 105.5 281 37.7
ATR0559G346 Amborella trichopoda HOM05D006297 ORTHO05D007873 8.4e-21 105.1 238 38.2
COL.COLO4_18571 Corchorus olitorius HOM05D006297 ORTHO05D007873 1.1e-20 104.8 244 39.3
Gohir.D07G104500 Gossypium hirsutum HOM05D006297 ORTHO05D007873 1.1e-20 104.8 212 42.0
PGR119G2469 Punica granatum HOM05D006297 ORTHO05D007873 5.5e-20 102.4 261 36.8
Manes.02G129500 Manihot esculenta HOM05D006297 ORTHO05D007873 9.3e-20 101.7 314 33.8
Duzib168G2114 Durio zibethinus HOM05D006297 ORTHO05D007873 2.1e-19 100.5 247 36.8
CSS0020880 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 2.3e-18 97.1 238 36.6
Haze_24152 Corylus avellana HOM05D006297 ORTHO05D007873 3.0e-18 96.7 279 35.1
Peaxi162Scf00481g00328 Petunia axillaris HOM05D006297 ORTHO05D007873 3.9e-18 96.3 267 34.8
Migut.D00880 Erythranthe guttata HOM05D006297 ORTHO05D007873 3.3e-17 93.2 267 37.8
Medtr4g064830 Medicago truncatula HOM05D006297 ORTHO05D007873 5.7e-17 92.4 306 30.7
Nitab4.5_0006916g0050 Nicotiana tabacum HOM05D006297 ORTHO05D007873 2.8e-16 90.1 270 32.6
CiPaw.13G089900 Carya illinoinensis HOM05D006297 ORTHO05D007873 4.8e-16 89.4 274 33.9
Glyma.11G136300 Glycine max HOM05D006297 ORTHO05D007873 4.8e-16 89.4 350 28.6
Psat7g210960 Pisum sativum HOM05D006297 ORTHO05D007873 8.2e-16 88.6 348 29.6
Ciclev10029821m.g Citrus clementina HOM05D006297 ORTHO05D007873 1.4e-15 87.8 275 36.7
TPR.G23574 Trifolium pratense HOM05D006297 ORTHO05D007873 2.4e-15 87.0 313 30.7
Thecc.09G316300 Theobroma cacao HOM05D006297 ORTHO05D007873 4.1e-15 86.3 279 32.6
Ca_20618_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 9.0e-15 85.1 306 30.4
DCAR_007431 Daucus carota HOM05D006297 ORTHO05D000003 1.5e-14 84.3 241 34.0
Glyma.12G060000 Glycine max HOM05D006297 ORTHO05D007873 1.5e-14 84.3 321 29.3
CsaV3_1G034520 Cucumis sativus L. HOM05D006297 ORTHO05D007873 2.0e-14 84.0 305 30.8
Nn2g13426 Nelumbo nucifera HOM05D006297 ORTHO05D007873 4.5e-14 82.8 354 28.2
Rhsim13G0077500 Rhododendron simsii HOM05D000001 ORTHO05D010418 7.6e-14 82.0 209 34.9
Prupe.6G070900 Prunus persica HOM05D006297 ORTHO05D007873 1.0e-13 81.6 330 31.2
Nn2g11187 Nelumbo nucifera HOM05D006297 ORTHO05D007873 2.9e-13 80.1 212 37.7
Cfa011548 Carpinus fangiana HOM05D006297 ORTHO05D007873 3.8e-13 79.7 273 32.6
FAN16G1466 Fragaria x ananassa HOM05D006297 ORTHO05D007873 3.8e-13 79.7 111 44.1
FAN25G2608 Fragaria x ananassa HOM05D006297 ORTHO05D007873 3.8e-13 79.7 108 45.4
Phvul.011G061900 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 5.0e-13 79.3 342 29.2
FvH4_3g36910 Fragaria vesca HOM05D006297 ORTHO05D007873 8.4e-13 78.6 96 49.0
FAN11G1892 Fragaria x ananassa HOM05D006297 ORTHO05D007873 8.4e-13 78.6 96 49.0
THA.LOC104799430 Tarenaya hassleriana HOM05D006297 ORTHO05D007873 8.4e-13 78.6 260 33.1
FAN21G2693 Fragaria x ananassa HOM05D006297 ORTHO05D007873 1.1e-12 78.2 111 44.1
CAN.G394.75 Capsicum annuum HOM05D006297 ORTHO05D007873 1.4e-12 77.8 284 30.6
Duzib170G0989 Durio zibethinus HOM05D006297 ORTHO05D007873 1.4e-12 77.8 200 37.5
VMungo1127G1804 Vigna mungo HOM05D006297 ORTHO05D007873 4.2e-12 76.3 339 28.3
MELO3C020609.2 Cucumis melo HOM05D006297 ORTHO05D007873 1.6e-11 74.3 309 29.8
RcHm_v2.0_Chr5g0066301 Rosa chinensis HOM05D006297 ORTHO05D007873 1.6e-11 74.3 103 44.7
Eucgr.B02311 Eucalyptus grandis HOM05D006297 ORTHO05D007873 2.1e-11 73.9 266 32.7
Lalb_Chr03g0026471 Lupinus albus HOM05D006297 ORTHO05D007873 2.1e-11 73.9 362 29.6
Sopen06g032780 Solanum pennellii HOM05D006297 ORTHO05D007873 2.1e-11 73.9 256 30.1
MD11G1095400 Malus domestica HOM05D006297 ORTHO05D007873 2.7e-11 73.6 340 28.8
Lalb_Chr22g0352441 Lupinus albus HOM05D006297 ORTHO05D007873 3.5e-11 73.2 291 29.6
Solyc06g076370.4 Solanum lycopersicum HOM05D006297 ORTHO05D007873 3.5e-11 73.2 255 31.4
arahy.Tifrunner.gnm1.ann1.19P32Y Arachis hypogaea HOM05D006297 ORTHO05D007873 4.6e-11 72.8 217 36.9
CANSAT54G0582 Cannabis sativa HOM05D006297 ORTHO05D007873 4.6e-11 72.8 335 28.4
Lalb_Chr01g0003491 Lupinus albus HOM05D006297 ORTHO05D007873 7.9e-11 72.0 365 28.2
Lj3g0014453 Lotus japonicus HOM05D006297 ORTHO05D007873 1.3e-10 71.2 317 27.4
Sabra16G0148100 Salix brachista HOM05D000026 ORTHO05D000094 1.8e-10 70.9 229 33.2
CiPaw.14G065800 Carya illinoinensis HOM05D006297 ORTHO05D007873 3.0e-10 70.1 220 33.6
Glyma.15G035500 Glycine max HOM05D006297 ORTHO05D007873 3.9e-10 69.7 341 26.7
Aqoxy1G00878 Aquilegia oxysepala HOM05D006297 ORTHO05D007873 1.1e-09 68.2 308 30.5
arahy.Tifrunner.gnm1.ann1.FG1CRE Arachis hypogaea HOM05D006297 ORTHO05D007873 1.5e-09 67.8 68 58.8
SalBow1G2607 Salvia bowleyana HOM05D006297 ORTHO05D007873 1.5e-09 67.8 70 57.1
SalBow6G6944 Salvia bowleyana HOM05D006297 ORTHO05D007873 1.5e-09 67.8 70 57.1
Lsat_1_v5_gn_8_72960 Lactuca sativa HOM05D006297 ORTHO05D007873 3.3e-09 66.6 251 30.7
Lsat_1_v5_gn_5_169521 Lactuca sativa HOM05D006297 ORTHO05D007873 5.7e-09 65.9 192 31.8
Potri.001G243900 Populus trichocarpa HOM05D006297 ORTHO05D007873 7.4e-09 65.5 349 27.8
Sed0017584 Sechium edule HOM05D006297 ORTHO05D007873 7.4e-09 65.5 287 29.3
SGA_v2.0_scaffold54G19479 Striga asiatica HOM05D006297 ORTHO05D007873 7.4e-09 65.5 236 30.1
Ca_01304_v3 Cicer arietinum L. HOM05D006297 ORTHO05D007873 9.7e-09 65.1 245 32.2
arahy.Tifrunner.gnm1.ann1.NT76K4 Arachis hypogaea HOM05D006297 ORTHO05D007873 1.6e-08 64.3 314 27.1
MSTRG.18559 Avicennia marina HOM05D006297 ORTHO05D007873 1.6e-08 64.3 305 29.5
ClCG03G001300 Citrullus lanatus HOM05D006297 ORTHO05D007873 2.2e-08 63.9 300 29.7
Sed0011562 Sechium edule HOM05D006297 ORTHO05D007873 2.2e-08 63.9 307 28.7
HanXRQChr05g0135261 Helianthus annuus HOM05D006297 ORTHO05D007873 2.8e-08 63.5 234 30.8
Medtr2g097710 Medicago truncatula HOM05D006297 ORTHO05D007873 2.8e-08 63.5 277 29.6
EL10Ac7g16061 Beta vulgaris HOM05D006297 ORTHO05D007873 4.8e-08 62.8 147 36.1
AUR62020026 Chenopodium quinoa HOM05D006297 ORTHO05D007873 6.3e-08 62.4 226 33.6
Glyma.13G338800 Glycine max HOM05D006297 ORTHO05D007873 6.3e-08 62.4 339 28.0
CSS0015831 Camellia sinensis var. sinensis HOM05D006297 ORTHO05D007873 1.1e-07 61.6 263 30.8
Dinv17042 Davidia involucrata HOM05D006297 ORTHO05D007873 1.1e-07 61.6 83 49.4
Dinv43112 Davidia involucrata HOM05D006297 ORTHO05D007873 1.1e-07 61.6 83 49.4
Psat5g118640 Pisum sativum HOM05D006297 ORTHO05D007873 1.4e-07 61.2 126 41.3
Nitab4.5_0023946g0010 Nicotiana tabacum HOM05D006297 ORTHO05D007873 1.8e-07 60.8 228 30.7
Sc12g0001260 Simmondsia chinensis HOM05D006297 ORTHO05D007873 2.4e-07 60.5 333 26.1
PSO513G0159 Papaver somniferum HOM05D006297 ORTHO05D007873 4.1e-07 59.7 105 36.2
A06p20810 Brassica napus HOM05D006297 ORTHO05D007873 5.3e-07 59.3 248 29.0
arahy.Tifrunner.gnm1.ann1.2MBI16 Arachis hypogaea HOM05D006297 ORTHO05D007873 6.9e-07 58.9 233 31.8
AUR62001745 Chenopodium quinoa HOM05D006297 ORTHO05D007873 6.9e-07 58.9 247 32.0
PSO339G0783 Papaver somniferum HOM05D006297 ORTHO05D007873 6.9e-07 58.9 106 37.7
unitig_899.g15423 Utricularia gibba HOM05D006297 ORTHO05D007873 6.9e-07 58.9 257 28.8
Hma1.2p1_0757F.1_g213410 Hydrangea macrophylla HOM05D006297 ORTHO05D007873 2.0e-06 57.4 111 40.5
DCAR_018924 Daucus carota HOM05D006297 ORTHO05D007873 3.4e-06 56.6 251 27.9
PGSC0003DMG400030329 Solanum tuberosum HOM05D006297 ORTHO05D007873 3.4e-06 56.6 226 27.0
Lj3g0003832 Lotus japonicus HOM05D006297 ORTHO05D007873 4.5e-06 56.2 168 36.9
Phvul.L008043 Phaseolus vulgaris HOM05D006297 ORTHO05D007873 4.5e-06 56.2 176 35.8
Ah.08g219890 Amaranthus hybridus HOM05D006297 ORTHO05D007873 5.9e-06 55.8 58 50.0


User provided reference genes

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