Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI14_g06401_MAGBIO Magnolia biondii HOM05D005270 ORTHO05D006239 3.6e-77 292.0 200 100.0
MBI15_g47610_MAGBIO Magnolia biondii HOM05D001260 ORTHO05D004134 5.6e-22 108.6 53 98.1
TAR629G2769 Trochodendron aralioides HOM05D005270 ORTHO05D006239 1.1e-17 94.4 51 90.2
CANSAT21G2027 Cannabis sativa HOM05D005270 ORTHO05D006239 1.9e-17 93.6 53 84.9
HanXRQChr03g0087851 Helianthus annuus HOM05D005270 ORTHO05D006239 2.4e-17 93.2 53 86.8
Actinidia27450 Actinidia chinensis HOM05D005270 ORTHO05D006239 9.2e-17 91.3 53 84.9
FvH4_5g00280 Fragaria vesca HOM05D005270 ORTHO05D006239 9.2e-17 91.3 53 83.0
FAN04G3018 Fragaria x ananassa HOM05D005270 ORTHO05D006239 9.2e-17 91.3 53 83.0
FAN08G1405 Fragaria x ananassa HOM05D005270 ORTHO05D006239 9.2e-17 91.3 53 83.0
FAN13G2928 Fragaria x ananassa HOM05D005270 ORTHO05D006239 9.2e-17 91.3 53 83.0
FAN18G1040 Fragaria x ananassa HOM05D005270 ORTHO05D006239 9.2e-17 91.3 53 83.0
Hma1.2p1_1414F.1_g281890 Hydrangea macrophylla HOM05D005270 ORTHO05D006239 9.2e-17 91.3 51 88.2
Lsat_1_v5_gn_6_90321 Lactuca sativa HOM05D005270 ORTHO05D006239 9.2e-17 91.3 51 88.2
Manes.01G076600 Manihot esculenta HOM05D005270 ORTHO05D006239 9.2e-17 91.3 51 88.2
RcHm_v2.0_Chr7g0202331 Rosa chinensis HOM05D005270 ORTHO05D006239 9.2e-17 91.3 53 83.0
HPP92_022434 Vanilla planifolia HOM05D005270 ORTHO05D006239 1.6e-16 90.5 65 69.2
Atru.chr9.1379_Atru.chr9.1380 Acer truncatum HOM05D005270 ORTHO05D006239 2.1e-16 90.1 51 86.3
ClCG01G003850 Citrullus lanatus HOM05D005270 ORTHO05D006239 2.1e-16 90.1 51 86.3
COL.COLO4_37215 Corchorus olitorius HOM05D005270 ORTHO05D006239 2.1e-16 90.1 51 86.3
MELO3C005559.2 Cucumis melo HOM05D005270 ORTHO05D006239 2.1e-16 90.1 51 86.3
CsaV3_5G003980 Cucumis sativus L. HOM05D005270 ORTHO05D006239 2.1e-16 90.1 51 86.3
Sed0019529 Sechium edule HOM05D005270 ORTHO05D006239 2.1e-16 90.1 51 86.3
GSVIVG01001274001 Vitis vinifera HOM05D005270 ORTHO05D006239 2.7e-16 89.7 51 86.3
GSVIVG01004774001 Vitis vinifera HOM05D005270 ORTHO05D006239 2.7e-16 89.7 51 86.3
CSS0023019 Camellia sinensis var. sinensis HOM05D005270 ORTHO05D006239 3.5e-16 89.4 51 86.3
CSS0046114 Camellia sinensis var. sinensis HOM05D005270 ORTHO05D006239 3.5e-16 89.4 51 86.3
AUR62007475 Chenopodium quinoa HOM05D005270 ORTHO05D006239 3.5e-16 89.4 52 84.6
Eucgr.D02030 Eucalyptus grandis HOM05D005270 ORTHO05D006239 3.5e-16 89.4 51 86.3
Duzib068G0557 Durio zibethinus HOM05D005270 ORTHO05D006239 4.6e-16 89.0 51 84.3
ECA240G0014 Erigeron canadensis HOM05D000201 ORTHO05D006239 4.6e-16 89.0 51 86.3
Gohir.A03G010000 Gossypium hirsutum HOM05D005270 ORTHO05D006239 4.6e-16 89.0 51 84.3
MD06G1067000 Malus domestica HOM05D005270 ORTHO05D006239 4.6e-16 89.0 51 84.3
Prupe.5G075500 Prunus persica HOM05D005270 ORTHO05D006239 4.6e-16 89.0 51 84.3
CiPaw.11G150400 Carya illinoinensis HOM05D005270 ORTHO05D006239 6.0e-16 88.6 51 86.3
Haze_07851 Corylus avellana HOM05D005270 ORTHO05D006239 6.0e-16 88.6 50 88.0
PSO017G6911 Papaver somniferum HOM05D005270 ORTHO05D006239 6.0e-16 88.6 51 86.3
PSO170G6680 Papaver somniferum HOM05D005270 ORTHO05D006239 6.0e-16 88.6 51 86.3
Lj2A211T58 Lonicera japonica HOM05D005270 ORTHO05D006239 7.8e-16 88.2 51 84.3
QL12p013868 Quercus lobata HOM05D005270 ORTHO05D006239 7.8e-16 88.2 51 84.3
SalBow1G5553 Salvia bowleyana HOM05D005270 ORTHO05D006239 7.8e-16 88.2 75 61.3
Sc01g0009340 Simmondsia chinensis HOM05D005270 ORTHO05D006239 7.8e-16 88.2 51 84.3
Actinidia05188 Actinidia chinensis HOM05D005270 ORTHO05D006239 1.0e-15 87.8 51 84.3
Ciclev10020501m.g Citrus clementina HOM05D005270 ORTHO05D006239 1.0e-15 87.8 51 84.3
Cc08_g12920 Coffea canephora HOM05D005270 ORTHO05D006239 1.0e-15 87.8 69 63.8
Dinv39103 Davidia involucrata HOM05D000201 ORTHO05D001515 1.0e-15 87.8 51 86.3
MBI16_g06311_MAGBIO Magnolia biondii HOM05D001260 ORTHO05D004134 1.0e-15 87.8 41 100.0
Potri.001G120400 Populus trichocarpa HOM05D005270 ORTHO05D006239 1.0e-15 87.8 51 84.3
Gohir.A09G195500 Gossypium hirsutum HOM05D005270 ORTHO05D006239 1.3e-15 87.4 51 82.4
Gohir.D09G190100 Gossypium hirsutum HOM05D005270 ORTHO05D006239 1.3e-15 87.4 51 82.4
Gorai.006G212700 Gossypium raimondii HOM05D005270 ORTHO05D006239 1.3e-15 87.4 51 82.4
MBI04_g37584_MAGBIO Magnolia biondii HOM05D005270 ORTHO05D006239 1.3e-15 87.4 51 84.3
Duzib205G1833 Durio zibethinus HOM05D005270 ORTHO05D006239 1.7e-15 87.0 50 84.0
Gohir.D03G160700 Gossypium hirsutum HOM05D005270 ORTHO05D006239 1.7e-15 87.0 51 82.4
PGR031G3926 Punica granatum HOM05D005270 ORTHO05D006239 1.7e-15 87.0 51 80.4
TWI81G0718 Tripterygium wilfordii HOM05D005270 ORTHO05D006239 1.7e-15 87.0 51 80.4
Dinv21601 Davidia involucrata HOM05D005270 ORTHO05D006239 2.3e-15 86.7 51 84.3
Migut.E01048 Erythranthe guttata HOM05D005270 ORTHO05D006239 2.3e-15 86.7 51 82.4
Rhsim07G0104300 Rhododendron simsii HOM05D005270 ORTHO05D006239 3.0e-15 86.3 51 82.4
DCAR_006814 Daucus carota HOM05D005270 ORTHO05D006239 3.9e-15 85.9 53 81.1
Thecc.03G257000 Theobroma cacao HOM05D005270 ORTHO05D006239 3.9e-15 85.9 51 80.4
Sabra01G0092800 Salix brachista HOM05D005270 ORTHO05D006239 8.6e-15 84.7 51 80.4
SalBow1G0839 Salvia bowleyana HOM05D005270 ORTHO05D006239 8.6e-15 84.7 53 77.4
vmacro14106 Vaccinium macrocarpon HOM05D005270 ORTHO05D006239 8.6e-15 84.7 51 80.4
Cpa.g.sc29.127 Carica papaya HOM05D005270 ORTHO05D006239 1.1e-14 84.3 51 78.4
ATR1152G004 Amborella trichopoda HOM05D005270 ORTHO05D006239 1.5e-14 84.0 51 76.5
MSTRG.25537 Avicennia marina HOM05D005270 ORTHO05D006239 1.5e-14 84.0 51 78.4
CARHR012530 Cardamine hirsuta HOM05D005270 ORTHO05D006239 1.5e-14 84.0 53 79.2
Lalb_Chr05g0225581 Lupinus albus HOM05D005270 ORTHO05D006239 1.9e-14 83.6 51 82.4
Solyc08g079070.2 Solanum lycopersicum HOM05D005270 ORTHO05D006239 1.9e-14 83.6 53 73.6
Sopen08g027530 Solanum pennellii HOM05D005270 ORTHO05D006239 1.9e-14 83.6 53 73.6
SGA_v2.0_scaffold144G35994 Striga asiatica HOM05D005270 ORTHO05D003965 1.9e-14 83.6 51 78.4
THA.LOC104809459 Tarenaya hassleriana HOM05D005270 ORTHO05D006239 1.9e-14 83.6 50 80.0
AL1G23510 Arabidopsis lyrata HOM05D005270 ORTHO05D006239 2.5e-14 83.2 50 82.0
Carub.0001s1190 Capsella rubella HOM05D005270 ORTHO05D006239 2.5e-14 83.2 50 82.0
Glyma.05G056400 Glycine max HOM05D005270 ORTHO05D006239 2.5e-14 83.2 51 82.4
Glyma.17G138600 Glycine max HOM05D005270 ORTHO05D006239 2.5e-14 83.2 51 82.4
VMungo0251G3554 Vigna mungo HOM05D005270 ORTHO05D006239 2.5e-14 83.2 51 82.4
A06p09330 Brassica napus HOM05D005270 ORTHO05D006239 3.3e-14 82.8 50 82.0
C05p11010 Brassica napus HOM05D005270 ORTHO05D006239 3.3e-14 82.8 50 82.0
BolC5t29844H Brassica oleracea HOM05D005270 ORTHO05D006239 3.3e-14 82.8 50 82.0
BraA06t24120Z Brassica rapa HOM05D005270 ORTHO05D006239 3.3e-14 82.8 50 82.0
MBI18_g46779_MAGBIO Magnolia biondii HOM05D005270 ORTHO05D004199 3.3e-14 82.8 49 85.7
Nitab4.5_0009175g0010 Nicotiana tabacum HOM05D005270 ORTHO05D006239 3.3e-14 82.8 51 78.4
Peaxi162Scf00002g00815 Petunia axillaris HOM05D005270 ORTHO05D006239 3.3e-14 82.8 47 83.0
Sp1g10840 Schrenkiella parvula HOM05D005270 ORTHO05D006239 3.3e-14 82.8 50 82.0
AT1G12230 Arabidopsis thaliana HOM05D005270 ORTHO05D006239 5.6e-14 82.0 50 80.0
Thhalv10007790m.g Eutrema salsugineum HOM05D005270 ORTHO05D006239 5.6e-14 82.0 50 82.0
Phvul.003G218000 Phaseolus vulgaris HOM05D005270 ORTHO05D006239 5.6e-14 82.0 51 80.4
arahy.Tifrunner.gnm1.ann1.9F7ELE Arachis hypogaea HOM05D005270 ORTHO05D006239 7.3e-14 81.6 51 78.4
CAN.G1217.18 Capsicum annuum HOM05D000486 ORTHO05D000375 9.5e-14 81.3 51 74.5
CDE12G0422 Ceratophyllum demersum HOM05D005270 ORTHO05D006239 9.5e-14 81.3 69 60.9
Oeu038010.1 Olea europaea HOM05D005270 ORTHO05D006239 9.5e-14 81.3 51 74.5
PGSC0003DMG400004791 Solanum tuberosum HOM05D005270 ORTHO05D006239 9.5e-14 81.3 51 74.5
Aqoxy7G00723 Aquilegia oxysepala HOM05D005270 ORTHO05D006239 1.2e-13 80.9 49 81.6
Medtr4g101620 Medicago truncatula HOM05D005270 ORTHO05D006239 1.2e-13 80.9 51 78.4
Aa31LG1G2400 Aethionema arabicum HOM05D005270 ORTHO05D006239 1.6e-13 80.5 50 80.0
Nitab4.5_0000993g0070 Nicotiana tabacum HOM05D005270 ORTHO05D006239 1.6e-13 80.5 51 74.5
AagrBONN_evm.TU.Sc2ySwM_369.586 Anthoceros agrestis HOM05D005270 ORTHO05D006239 2.1e-13 80.1 51 74.5
arahy.Tifrunner.gnm1.ann1.VW53Z5 Arachis hypogaea HOM05D005270 ORTHO05D006239 3.6e-13 79.3 51 76.5
unitig_0.g1234 Utricularia gibba HOM05D005270 ORTHO05D006239 3.6e-13 79.3 51 74.5
Psat4g070360 Pisum sativum HOM05D005270 ORTHO05D006239 6.2e-13 78.6 51 76.5
EL10Ac5g13010 Beta vulgaris HOM05D005270 ORTHO05D006239 8.1e-13 78.2 45 84.4
TPR.G37612 Trifolium pratense HOM05D005270 ORTHO05D006239 8.1e-13 78.2 51 76.5
Zm00001eb172680 Zea mays HOM05D005270 ORTHO05D006239 8.1e-13 78.2 49 75.5
Lj4g0020394 Lotus japonicus HOM05D005270 ORTHO05D006239 1.1e-12 77.8 51 76.5
SEGI_05849 Sequoiadendron giganteum HOM05D005270 ORTHO05D006239 1.8e-12 77.0 49 73.5
Ca_25339_v3 Cicer arietinum L. HOM05D005270 ORTHO05D006239 2.4e-12 76.6 51 74.5
CDE04G2727 Ceratophyllum demersum HOM05D005270 ORTHO05D006239 3.1e-12 76.3 47 78.7
Pp3c15_6350 Physcomitrium patens HOM05D005270 ORTHO05D006239 1.2e-11 74.3 53 66.0
Psat5g235160 Pisum sativum HOM05D005270 ORTHO05D006239 3.4e-11 72.8 49 73.5
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 9.9e-11 71.2 52 61.5
Psat5g232960 Pisum sativum HOM05D005270 ORTHO05D006239 9.9e-11 71.2 49 71.4
CBR_g37411 Chara braunii HOM05D005270 ORTHO05D006239 2.9e-10 69.7 51 64.7
BcaC05g25195 Brassica carinata HOM05D005270 ORTHO05D006239 1.1e-09 67.8 43 76.7
Mapoly0029s0029 Marchantia polymorpha HOM05D005270 ORTHO05D006239 7.1e-09 65.1 51 58.8
Gorai.N027100 Gossypium raimondii HOM05D005270 ORTHO05D006239 1.0e-07 61.2 35 77.1


User provided reference genes

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