Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 6.8e-63 243.8 123 100.0
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.5e-46 189.5 149 71.1
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 6.3e-24 114.4 154 48.7
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 2.6e-22 109.0 144 48.6
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 5.0e-21 104.8 154 45.5
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 1.1e-20 103.6 148 46.6
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 9.3e-20 100.5 151 43.0
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 1.2e-19 100.1 155 41.9
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.2e-19 100.1 153 40.5
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 1.6e-19 99.8 144 47.2
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 2.7e-19 99.0 153 42.5
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 2.7e-19 99.0 153 43.1
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 1.8e-18 96.3 152 43.4
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 2.3e-18 95.9 153 42.5
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 3.0e-18 95.5 153 39.9
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 3.9e-18 95.1 157 43.3
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 5.1e-18 94.7 153 41.8
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 5.1e-18 94.7 145 44.1
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 6.7e-18 94.4 144 43.8
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 6.7e-18 94.4 152 40.8
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 1.1e-17 93.6 153 41.8
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.1e-17 93.6 153 41.2
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.5e-17 93.2 154 39.0
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.9e-17 92.8 157 44.6
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 2.5e-17 92.4 152 42.8
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 3.3e-17 92.0 155 44.5
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 4.3e-17 91.7 153 40.5
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.7e-17 91.3 153 40.5
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 5.7e-17 91.3 150 40.7
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 5.7e-17 91.3 150 40.7
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 7.4e-17 90.9 152 40.8
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.7e-16 89.7 153 41.8
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 2.2e-16 89.4 154 41.6
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.2e-16 89.4 153 41.2
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.2e-16 89.4 153 41.8
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.2e-16 89.4 153 41.2
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 2.2e-16 89.4 155 41.3
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 3.7e-16 88.6 145 41.4
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.7e-16 88.6 145 41.4
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 3.7e-16 88.6 153 41.8
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.7e-16 88.6 159 37.1
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 4.8e-16 88.2 153 41.8
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 6.3e-16 87.8 149 43.0
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.3e-16 87.8 152 40.1
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.8e-15 86.3 145 42.8
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.8e-15 86.3 148 42.6
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 1.8e-15 86.3 147 42.9
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.4e-15 85.9 153 40.5
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.1e-15 85.5 154 40.9
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 3.1e-15 85.5 152 38.2
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 6.9e-15 84.3 153 39.9
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 6.9e-15 84.3 145 40.0
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 9.1e-15 84.0 144 41.0
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.2e-14 83.6 151 39.7
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 2.6e-14 82.4 148 38.5
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 7.7e-14 80.9 151 37.7
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 1.0e-13 80.5 153 37.9
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 1.0e-13 80.5 144 42.4
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 2.2e-13 79.3 144 42.4
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 2.9e-13 79.0 144 37.5
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 2.9e-13 79.0 182 33.0
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 3.8e-13 78.6 152 38.8
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 5.0e-13 78.2 141 39.0
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 6.5e-13 77.8 150 36.0
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 8.5e-13 77.4 148 35.8
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 8.5e-13 77.4 150 37.3
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 8.5e-13 77.4 153 35.9
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.4e-12 76.6 150 36.0
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.4e-12 76.6 149 36.2
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 1.4e-12 76.6 92 47.8
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 2.5e-12 75.9 152 36.8
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 3.2e-12 75.5 148 34.5
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 3.2e-12 75.5 141 36.9
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 5.5e-12 74.7 92 51.1
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 9.4e-12 73.9 150 35.3
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 1.6e-11 73.2 153 36.6
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 1.6e-11 73.2 153 36.6
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 3.6e-11 72.0 149 38.3
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 3.6e-11 72.0 154 35.1
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 6.1e-11 71.2 151 35.1
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 7.9e-11 70.9 153 35.3
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 7.9e-11 70.9 148 34.5
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 1.4e-10 70.1 149 34.9
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 2.3e-10 69.3 155 35.5
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 2.3e-10 69.3 148 35.1
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 5.1e-10 68.2 148 34.5
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 6.7e-10 67.8 151 31.8
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 8.8e-10 67.4 145 33.8
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.5e-09 66.6 219 30.1
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 2.0e-09 66.2 144 34.7
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 2.0e-09 66.2 150 32.7
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 3.3e-09 65.5 145 36.6
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 3.3e-09 65.5 148 31.8
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 4.4e-09 65.1 101 44.6
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 5.7e-09 64.7 150 32.0
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 7.4e-09 64.3 243 28.4
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 9.7e-09 63.9 148 33.8
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 1.3e-08 63.5 147 36.1
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.3e-08 63.5 152 32.9
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.2e-08 62.8 148 31.8
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 2.2e-08 62.8 142 36.6
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.8e-08 62.4 152 32.2
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 4.8e-08 61.6 144 31.9
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 4.8e-08 61.6 144 31.9
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 1.1e-07 60.5 141 35.5
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.4e-07 60.1 153 30.7
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 1.8e-07 59.7 144 31.9
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.4e-07 59.3 149 31.5
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 2.4e-07 59.3 150 34.0
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 7.0e-07 57.8 130 34.6
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 9.1e-07 57.4 150 36.0
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 1.2e-06 57.0 137 38.7
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 1.2e-06 57.0 137 38.7
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 1.2e-06 57.0 137 38.7
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 1.2e-06 57.0 137 38.7
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 1.2e-06 57.0 133 35.3
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.5e-06 56.6 161 31.7
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 1.5e-06 56.6 123 37.4
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 2.0e-06 56.2 133 35.3
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 2.0e-06 56.2 132 36.4
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 2.0e-06 56.2 131 36.6
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 2.0e-06 56.2 120 38.3
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 2.6e-06 55.8 128 33.6
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 4.5e-06 55.1 132 32.6
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 4.5e-06 55.1 128 33.6
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 4.5e-06 55.1 128 33.6
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 4.5e-06 55.1 128 33.6
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 5.9e-06 54.7 154 31.2
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 7.7e-06 54.3 133 36.8


User provided reference genes

Program Settings