Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g46381_MAGBIO Magnolia biondii HOM05D000515 ORTHO05D005511 4.3e-125 451.4 247 100.0
MBI13_g09206_MAGBIO Magnolia biondii HOM05D000515 ORTHO05D005511 5.2e-62 241.9 161 77.0
TAR623G0628 Trochodendron aralioides HOM05D000515 ORTHO05D005511 2.3e-41 173.3 120 69.2
Dinv21481 Davidia involucrata HOM05D000515 ORTHO05D005511 1.6e-39 167.2 120 66.7
Prupe.7G028900 Prunus persica HOM05D000515 ORTHO05D005511 1.1e-38 164.5 120 63.3
CANSAT64G0753 Cannabis sativa HOM05D000515 ORTHO05D005511 1.4e-38 164.1 126 60.3
CSS0006678 Camellia sinensis var. sinensis HOM05D000515 ORTHO05D005511 2.4e-38 163.3 126 61.1
CSS0034372 Camellia sinensis var. sinensis HOM05D000515 ORTHO05D005511 4.0e-38 162.5 120 62.5
Lj1A1086T48 Lonicera japonica HOM05D000515 ORTHO05D005511 4.0e-38 162.5 120 64.2
Hma1.2p1_0254F.1_g103230 Hydrangea macrophylla HOM05D000515 ORTHO05D005511 5.3e-38 162.2 120 62.5
Potri.006G035700 Populus trichocarpa HOM05D000515 ORTHO05D005511 1.2e-37 161.0 125 60.0
AUR62030289 Chenopodium quinoa HOM05D000515 ORTHO05D005511 1.5e-37 160.6 120 61.7
Aqoxy2G00507 Aquilegia oxysepala HOM05D000515 ORTHO05D005511 2.0e-37 160.2 122 59.8
Sabra06G0023900 Salix brachista HOM05D000515 ORTHO05D005511 2.0e-37 160.2 125 60.0
Nn7g36906 Nelumbo nucifera HOM05D000515 ORTHO05D005511 2.6e-37 159.8 120 62.5
Ciclev10011059m.g Citrus clementina HOM05D000515 ORTHO05D005511 3.4e-37 159.5 120 62.5
MD00G1159900 Malus domestica HOM05D000515 ORTHO05D005511 3.4e-37 159.5 126 58.7
Hund24560 Selenicereus undatus HOM05D000515 ORTHO05D005511 1.3e-36 157.5 120 61.7
AT5G05130 Arabidopsis thaliana HOM05D000515 ORTHO05D005511 1.7e-36 157.1 125 59.2
Thhalv10012664m.g Eutrema salsugineum HOM05D000515 ORTHO05D005511 1.7e-36 157.1 125 59.2
AUR62018373 Chenopodium quinoa HOM05D000515 ORTHO05D005511 2.2e-36 156.8 120 60.8
TAR623G1309 Trochodendron aralioides HOM05D000515 ORTHO05D005511 2.2e-36 156.8 122 63.1
Haze_20252 Corylus avellana HOM05D000515 ORTHO05D005511 2.9e-36 156.4 122 63.1
Rhsim04G0113800 Rhododendron simsii HOM05D000515 ORTHO05D005511 2.9e-36 156.4 120 60.8
AL6G14960 Arabidopsis lyrata HOM05D000515 ORTHO05D005511 3.8e-36 156.0 125 59.2
QL07p012138 Quercus lobata HOM05D000515 ORTHO05D005511 4.9e-36 155.6 123 61.8
THA.LOC104827449 Tarenaya hassleriana HOM05D000515 ORTHO05D005511 4.9e-36 155.6 126 57.9
Sp6g37710 Schrenkiella parvula HOM05D000515 ORTHO05D005511 6.4e-36 155.2 125 58.4
CARHR208140 Cardamine hirsuta HOM05D000515 ORTHO05D005511 8.4e-36 154.8 125 56.8
CiPaw.10G042400 Carya illinoinensis HOM05D000515 ORTHO05D005511 8.4e-36 154.8 122 63.1
Ah.04g150800 Amaranthus hybridus HOM05D000515 ORTHO05D005511 1.1e-35 154.5 121 62.0
Cc06_g19970 Coffea canephora HOM05D000515 ORTHO05D005511 1.1e-35 154.5 120 59.2
Migut.K00146 Erythranthe guttata HOM05D000515 ORTHO05D005511 1.1e-35 154.5 120 60.8
Oeu005219.1 Olea europaea HOM05D000515 ORTHO05D005511 1.1e-35 154.5 120 59.2
Carub.0006s0406 Capsella rubella HOM05D000515 ORTHO05D005511 1.4e-35 154.1 125 57.6
AUR62018374 Chenopodium quinoa HOM05D000515 ORTHO05D005511 1.9e-35 153.7 120 58.3
FAN18G0066 Fragaria x ananassa HOM05D000515 ORTHO05D005511 1.9e-35 153.7 121 59.5
AUR62030288 Chenopodium quinoa HOM05D000515 ORTHO05D005511 2.4e-35 153.3 121 58.7
FvH4_5g29290 Fragaria vesca HOM05D000515 ORTHO05D005511 3.2e-35 152.9 121 59.5
Manes.09G002900 Manihot esculenta HOM05D000515 ORTHO05D005511 4.2e-35 152.5 125 56.8
Nitab4.5_0000653g0130 Nicotiana tabacum HOM05D000515 ORTHO05D005511 4.2e-35 152.5 120 60.8
Nitab4.5_0010640g0010 Nicotiana tabacum HOM05D000515 ORTHO05D005511 4.2e-35 152.5 120 60.8
Dinv08255 Davidia involucrata HOM05D000515 ORTHO05D005511 7.1e-35 151.8 106 65.1
EL10Ac3g07263 Beta vulgaris HOM05D000515 ORTHO05D005511 9.3e-35 151.4 120 58.3
FAN08G2165 Fragaria x ananassa HOM05D000515 ORTHO05D005511 9.3e-35 151.4 121 58.7
BolC9t59918H Brassica oleracea HOM05D000515 ORTHO05D005511 1.2e-34 151.0 126 58.7
A10p31050 Brassica napus HOM05D000515 ORTHO05D005511 1.6e-34 150.6 126 58.7
BraA10t45149Z Brassica rapa HOM05D000515 ORTHO05D005511 1.6e-34 150.6 126 58.7
HPP92_001142 Vanilla planifolia HOM05D000515 ORTHO05D005511 1.6e-34 150.6 125 60.0
RcHm_v2.0_Chr7g0222151 Rosa chinensis HOM05D000515 ORTHO05D005511 3.5e-34 149.4 121 58.7
C09p71570 Brassica napus HOM05D000515 ORTHO05D005511 6.0e-34 148.7 126 57.9
Cpa.g.sc92.77 Carica papaya HOM05D000515 ORTHO05D005511 6.0e-34 148.7 125 56.0
Peaxi162Scf00076g00328 Petunia axillaris HOM05D000515 ORTHO05D005511 6.0e-34 148.7 120 59.2
PGR142G1719 Punica granatum HOM05D000515 ORTHO05D005511 6.0e-34 148.7 124 59.7
SGA_v2.0_scaffold106G30530 Striga asiatica HOM05D000515 ORTHO05D005511 7.9e-34 148.3 121 60.3
TWI74G0167 Tripterygium wilfordii HOM05D000515 ORTHO05D005511 1.0e-33 147.9 123 56.9
CDE08G0661 Ceratophyllum demersum HOM05D000515 ORTHO05D005511 5.1e-33 145.6 118 52.5
MSTRG.26167 Avicennia marina HOM05D000515 ORTHO05D005511 6.6e-33 145.2 125 55.2
Duzib128G1588 Durio zibethinus HOM05D000515 ORTHO05D005511 8.7e-33 144.8 120 60.0
vmacro08997 Vaccinium macrocarpon HOM05D000515 ORTHO05D005511 1.1e-32 144.4 120 55.8
Cfa019981 Carpinus fangiana HOM05D000515 ORTHO05D005511 5.6e-32 142.1 120 56.7
Lalb_Chr22g0357741 Lupinus albus HOM05D000515 ORTHO05D005511 7.3e-32 141.7 120 56.7
PSO339G0711 Papaver somniferum HOM05D000515 ORTHO05D005511 1.6e-31 140.6 120 56.7
SHI24537 Sapria himalayana HOM05D000515 ORTHO05D005511 1.6e-31 140.6 120 55.8
Glyma.03G124900 Glycine max HOM05D000515 ORTHO05D005511 3.6e-31 139.4 120 53.3
PSO384G3808 Papaver somniferum HOM05D000515 ORTHO05D005511 6.2e-31 138.7 120 55.8
Gohir.A13G001900 Gossypium hirsutum HOM05D000515 ORTHO05D005511 8.1e-31 138.3 120 55.8
Thecc.05G121100 Theobroma cacao HOM05D000515 ORTHO05D005511 8.1e-31 138.3 120 56.7
unitig_899.g15089 Utricularia gibba HOM05D000515 ORTHO05D005511 1.1e-30 137.9 120 56.7
ATR0307G017 Amborella trichopoda HOM05D000515 ORTHO05D005511 1.4e-30 137.5 123 52.8
Solyc12g020110.2 Solanum lycopersicum HOM05D000515 ORTHO05D005511 1.4e-30 137.5 120 54.2
Sopen12g011610 Solanum pennellii HOM05D000515 ORTHO05D005511 1.4e-30 137.5 120 54.2
Sc19g0008090 Simmondsia chinensis HOM05D000515 ORTHO05D005511 1.8e-30 137.1 122 56.6
PGSC0003DMG400008774 Solanum tuberosum HOM05D000515 ORTHO05D005511 1.8e-30 137.1 120 55.8
COL.COLO4_07034 Corchorus olitorius HOM05D000515 ORTHO05D005511 2.4e-30 136.7 120 55.0
Gohir.D13G001300 Gossypium hirsutum HOM05D000515 ORTHO05D005511 2.4e-30 136.7 120 55.0
Gorai.013G001200 Gossypium raimondii HOM05D000515 ORTHO05D005511 2.4e-30 136.7 120 55.0
Lsat_1_v5_gn_7_61860 Lactuca sativa HOM05D000515 ORTHO05D005511 2.4e-30 136.7 122 54.1
CAN.G489.3 Capsicum annuum HOM05D000515 ORTHO05D005511 4.0e-30 136.0 119 54.6
Os07g0642400 Oryza sativa ssp. japonica HOM05D000515 ORTHO05D005511 2.0e-29 133.7 121 52.9
Lj1g0003942 Lotus japonicus HOM05D000515 ORTHO05D005511 7.6e-29 131.7 122 50.8
ECA248G3093 Erigeron canadensis HOM05D000515 ORTHO05D005511 2.9e-28 129.8 126 51.6
Prupe.7G029000 Prunus persica HOM05D000515 ORTHO05D005511 4.9e-28 129.0 106 52.8
Phvul.001G120300 Phaseolus vulgaris HOM05D000515 ORTHO05D005511 8.4e-28 128.3 121 48.8
TPR.G16098 Trifolium pratense HOM05D000515 ORTHO05D005511 1.1e-27 127.9 135 48.1
VMungo1383G0097 Vigna mungo HOM05D000515 ORTHO05D005511 1.4e-27 127.5 120 49.2
Ca_27817_v3 Cicer arietinum L. HOM05D000515 ORTHO05D005511 4.2e-27 125.9 134 49.3
Psat3g080400 Pisum sativum HOM05D000515 ORTHO05D005511 4.2e-27 125.9 130 50.0
Zm00001eb329060 Zea mays HOM05D000515 ORTHO05D005511 1.6e-26 124.0 122 50.8
HanXRQChr13g0406691 Helianthus annuus HOM05D000515 ORTHO05D005511 3.5e-26 122.9 120 51.7
arahy.Tifrunner.gnm1.ann1.WT7LXE Arachis hypogaea HOM05D000515 ORTHO05D005511 1.8e-25 120.6 122 51.6
Medtr7g089190 Medicago truncatula HOM05D000515 ORTHO05D005511 3.0e-25 119.8 135 47.4
arahy.Tifrunner.gnm1.ann1.C6MU4Z Arachis hypogaea HOM05D000515 ORTHO05D005511 6.7e-25 118.6 122 50.8
Eucgr.K01651 Eucalyptus grandis HOM05D000515 ORTHO05D005511 1.5e-24 117.5 68 73.5
SEGI_29164 Sequoiadendron giganteum HOM05D000515 ORTHO05D005511 2.5e-24 116.7 127 47.2
BcaC06g32222 Brassica carinata HOM05D000515 ORTHO05D005511 1.6e-23 114.0 72 68.1
Eucgr.K01656 Eucalyptus grandis HOM05D000515 ORTHO05D005511 2.8e-23 113.2 68 70.6
Eucgr.H00628 Eucalyptus grandis HOM05D000515 ORTHO05D005511 1.4e-22 110.9 97 52.6
PSO675G0750 Papaver somniferum HOM05D000515 ORTHO05D005511 9.0e-22 108.2 101 51.5
Potri.016G033800 Populus trichocarpa HOM05D000515 ORTHO05D005511 1.5e-21 107.5 84 57.1
Sabra16G0036700 Salix brachista HOM05D000515 ORTHO05D005511 1.5e-21 107.5 68 67.6
Sabra16G0054300 Salix brachista HOM05D000515 ORTHO05D005511 3.4e-21 106.3 68 66.2
Sabra16G0054400 Salix brachista HOM05D000515 ORTHO05D005511 4.5e-21 105.9 86 57.0
DCAR_020590 Daucus carota HOM05D000515 ORTHO05D005511 5.8e-21 105.5 112 47.3
Potri.016G034000 Populus trichocarpa HOM05D000515 ORTHO05D005511 1.7e-20 104.0 68 63.2
Potri.016G033600 Populus trichocarpa HOM05D000515 ORTHO05D005511 2.2e-20 103.6 86 54.7
Sabra16G0036600 Salix brachista HOM05D000515 ORTHO05D005511 4.9e-20 102.4 86 57.0
Potri.016G033700 Populus trichocarpa HOM05D000515 ORTHO05D005511 1.9e-19 100.5 67 64.2
SMO169G0179 Selaginella moellendorffii HOM05D000515 ORTHO05D005511 2.1e-18 97.1 106 47.2
CDE08G1597 Ceratophyllum demersum HOM05D000515 ORTHO05D005511 6.0e-18 95.5 57 64.9
HPP92_001115 Vanilla planifolia HOM05D000515 ORTHO05D025478 7.9e-18 95.1 95 52.6
MCO11G082 Micromonas commoda HOM05D000515 ORTHO05D005511 1.3e-17 94.4 95 46.3
AagrBONN_evm.TU.Sc2ySwM_344.3828 Anthoceros agrestis HOM05D000515 ORTHO05D005511 1.8e-17 94.0 113 43.4
Pp3c24_8230 Physcomitrium patens HOM05D000515 ORTHO05D005511 2.3e-17 93.6 105 48.6
SMO203G0195 Selaginella moellendorffii HOM05D000515 ORTHO05D005511 1.9e-16 90.5 94 47.9
GSVIVG01025773001 Vitis vinifera HOM05D000515 ORTHO05D005511 7.4e-16 88.6 44 79.5
MD15G1139300 Malus domestica HOM05D000515 ORTHO05D005511 2.1e-15 87.0 126 38.9
Sabra16G0036500 Salix brachista HOM05D000515 ORTHO05D005511 1.1e-14 84.7 68 55.9
DCAR_009135 Daucus carota HOM05D000515 ORTHO05D005511 7.6e-13 78.6 72 45.8
DCAR_009131 Daucus carota HOM05D000515 ORTHO05D005511 1.7e-12 77.4 72 45.8
PSO063G6687 Papaver somniferum HOM05D000515 ORTHO05D005511 1.7e-12 77.4 74 50.0
arahy.Tifrunner.gnm1.ann1.1JC5TC Arachis hypogaea HOM05D000515 ORTHO05D005511 2.9e-12 76.6 117 36.8
Cre14.g614400 Chlamydomonas reinhardtii HOM05D000515 ORTHO05D005511 1.4e-11 74.3 97 41.2
PRCOL_00006629 Prasinoderma coloniale HOM05D000515 ORTHO05D005511 2.5e-11 73.6 107 38.3
Zm00001eb020820 Zea mays HOM05D000515 ORTHO05D005511 7.2e-11 72.0 49 61.2
QL11p004347 Quercus lobata HOM05D000515 ORTHO05D005511 1.3e-07 61.2 65 49.2


User provided reference genes

Program Settings