Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g44214_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 4.4e-152 541.2 262 100.0
MBI13_g32993_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 1.2e-141 506.5 282 89.4
Nn7g37225 Nelumbo nucifera HOM05D007318 ORTHO05D009289 6.0e-101 371.3 276 62.7
QL04p044887 Quercus lobata HOM05D007318 ORTHO05D009289 4.3e-99 365.2 277 62.5
Atru.chr12.1022 Acer truncatum HOM05D007318 ORTHO05D009289 7.7e-96 354.4 277 61.7
Ciclev10016201m.g Citrus clementina HOM05D007318 ORTHO05D009289 1.0e-95 354.0 278 60.4
MD02G1257000 Malus domestica HOM05D007318 ORTHO05D009289 6.5e-95 351.3 278 58.3
Duzib151G0977 Durio zibethinus HOM05D007318 ORTHO05D009289 3.2e-94 349.0 278 60.1
Manes.03G085100 Manihot esculenta HOM05D007318 ORTHO05D009289 4.2e-94 348.6 276 59.4
Dinv09616 Davidia involucrata HOM05D007318 ORTHO05D009289 2.7e-93 345.9 276 59.1
CiPaw.14G032900 Carya illinoinensis HOM05D007318 ORTHO05D009289 3.6e-93 345.5 278 57.6
Actinidia18618 Actinidia chinensis HOM05D007318 ORTHO05D009289 5.1e-92 341.7 274 57.7
Haze_02511 Corylus avellana HOM05D007318 ORTHO05D009289 1.5e-91 340.1 273 59.0
Rhsim03G0098000 Rhododendron simsii HOM05D007318 ORTHO05D009289 2.5e-91 339.3 278 55.8
GSVIVG01001002001 Vitis vinifera HOM05D007318 ORTHO05D009289 3.3e-91 339.0 276 58.7
TWI63G0749 Tripterygium wilfordii HOM05D007318 ORTHO05D009289 5.7e-91 338.2 273 57.9
Gohir.D02G016400 Gossypium hirsutum HOM05D007318 ORTHO05D009289 7.4e-91 337.8 278 57.6
Eucgr.J00256 Eucalyptus grandis HOM05D007318 ORTHO05D009289 2.8e-90 335.9 278 57.9
CSS0001089 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 3.7e-90 335.5 279 56.3
Gorai.005G019900 Gossypium raimondii HOM05D007318 ORTHO05D009289 6.3e-90 334.7 278 57.2
COL.COLO4_33011 Corchorus olitorius HOM05D007318 ORTHO05D009289 8.2e-90 334.3 278 56.8
Oeu026589.2 Olea europaea HOM05D007318 ORTHO05D009289 8.2e-90 334.3 273 57.5
Sabra10G0186800 Salix brachista HOM05D007318 ORTHO05D009289 1.1e-89 334.0 278 56.8
CSS0042589 Camellia sinensis var. sinensis HOM05D007318 ORTHO05D009289 3.1e-89 332.4 279 55.9
Prupe.2G075500 Prunus persica HOM05D007318 ORTHO05D009289 5.9e-88 328.2 235 63.0
RcHm_v2.0_Chr1g0332361 Rosa chinensis HOM05D007318 ORTHO05D009289 8.5e-87 324.3 272 55.1
Sed0005914 Sechium edule HOM05D007318 ORTHO05D009289 1.1e-86 323.9 277 56.3
Hund22276 Selenicereus undatus HOM05D007318 ORTHO05D009289 1.4e-86 323.6 272 55.9
Peaxi162Scf00173g00322 Petunia axillaris HOM05D007318 ORTHO05D009289 3.2e-86 322.4 262 59.2
SalBow6G3105 Salvia bowleyana HOM05D007318 ORTHO05D009289 3.2e-86 322.4 271 57.2
CAN.G645.12 Capsicum annuum HOM05D007318 ORTHO05D009289 5.5e-86 321.6 270 57.8
DCAR_018980 Daucus carota HOM05D007318 ORTHO05D009289 5.5e-86 321.6 273 55.3
Nitab4.5_0001437g0020 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.2e-85 320.5 271 56.1
Lalb_Chr01g0010421 Lupinus albus HOM05D007318 ORTHO05D009289 1.0e-84 317.4 275 56.0
Nitab4.5_0011538g0040 Nicotiana tabacum HOM05D007318 ORTHO05D009289 1.0e-84 317.4 271 55.7
CANSAT56G0802 Cannabis sativa HOM05D007318 ORTHO05D009289 2.3e-84 316.2 297 52.5
CsaV3_5G035390 Cucumis sativus L. HOM05D007318 ORTHO05D009289 2.3e-84 316.2 274 55.8
Glyma.15G117500 Glycine max HOM05D007318 ORTHO05D009289 3.0e-84 315.8 277 56.0
Migut.F01608 Erythranthe guttata HOM05D007318 ORTHO05D009289 5.1e-84 315.1 271 54.6
Sopen11g002850 Solanum pennellii HOM05D007318 ORTHO05D009289 8.8e-84 314.3 277 55.2
Lj6g0015884 Lotus japonicus HOM05D007318 ORTHO05D009289 1.3e-82 310.5 276 53.6
ECA238G4459 Erigeron canadensis HOM05D007318 ORTHO05D009289 3.7e-82 308.9 273 53.8
Zm00001eb196200 Zea mays HOM05D007318 ORTHO05D009289 1.4e-81 307.0 269 56.1
Phvul.007G242433 Phaseolus vulgaris HOM05D007318 ORTHO05D009289 1.8e-81 306.6 276 54.3
VMungo0720G2068 Vigna mungo HOM05D007318 ORTHO05D009289 2.4e-81 306.2 276 54.0
FAN06G3353 Fragaria x ananassa HOM05D007318 ORTHO05D009289 3.1e-81 305.8 268 54.1
Aqoxy1G02117 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 4.1e-81 305.4 278 55.8
FAN01G1304 Fragaria x ananassa HOM05D007318 ORTHO05D009289 7.0e-81 304.7 268 53.7
Cc02_g09660 Coffea canephora HOM05D007318 ORTHO05D009289 1.2e-80 303.9 274 52.2
FvH4_7g05530 Fragaria vesca HOM05D007318 ORTHO05D009289 3.5e-80 302.4 268 53.7
ATR1096G030 Amborella trichopoda HOM05D007318 ORTHO05D009289 5.9e-80 301.6 231 61.0
Os11g0136500 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 7.7e-80 301.2 267 53.9
Aqoxy1G02095 Aquilegia oxysepala HOM05D007318 ORTHO05D009289 5.0e-79 298.5 290 53.1
HanXRQChr07g0194021 Helianthus annuus HOM05D007318 ORTHO05D009289 5.0e-79 298.5 273 53.5
PSO384G0062 Papaver somniferum HOM05D007318 ORTHO05D009289 8.5e-79 297.7 279 52.0
Potri.010G238500 Populus trichocarpa HOM05D007318 ORTHO05D009289 1.6e-77 293.5 224 60.3
arahy.Tifrunner.gnm1.ann1.CJJ3HV Arachis hypogaea HOM05D007318 ORTHO05D009289 5.2e-76 288.5 278 51.1
arahy.Tifrunner.gnm1.ann1.CYVU5X Arachis hypogaea HOM05D007318 ORTHO05D009289 5.2e-76 288.5 278 51.1
MELO3C012351.2 Cucumis melo HOM05D007318 ORTHO05D009289 5.2e-76 288.5 287 50.9
arahy.Tifrunner.gnm1.ann1.PPG341 Arachis hypogaea HOM05D007318 ORTHO05D009289 8.8e-76 287.7 278 51.1
Os12g0133400 Oryza sativa ssp. japonica HOM05D007318 ORTHO05D009289 8.8e-76 287.7 267 51.7
Cpa.g.sc5.264 Carica papaya HOM05D007318 ORTHO05D009289 1.1e-75 287.3 235 57.4
SGA_v2.0_scaffold13G06456 Striga asiatica HOM05D007318 ORTHO05D009289 2.6e-75 286.2 271 50.9
TPR.G10614 Trifolium pratense HOM05D007318 ORTHO05D009289 2.6e-75 286.2 279 52.3
EL10Ac4g08684 Beta vulgaris HOM05D007318 ORTHO05D009289 5.7e-75 285.0 271 50.2
Ca_20265_v3 Cicer arietinum L. HOM05D007318 ORTHO05D009289 3.7e-74 282.3 287 50.2
PGR044G0176 Punica granatum HOM05D007318 ORTHO05D009289 1.4e-73 280.4 224 57.6
HPP92_018209 Vanilla planifolia HOM05D007318 ORTHO05D009289 3.1e-73 279.3 277 49.1
Lsat_1_v5_gn_2_104460 Lactuca sativa HOM05D007318 ORTHO05D009289 7.0e-73 278.1 279 50.9
Medtr1g050425 Medicago truncatula HOM05D007318 ORTHO05D009289 3.5e-72 275.8 307 46.9
Solyc11g006930.3 Solanum lycopersicum HOM05D007318 ORTHO05D009289 1.5e-70 270.4 225 58.2
Lj2A32G32 Lonicera japonica HOM05D007318 ORTHO05D009289 1.9e-70 270.0 277 48.0
ClCG05G018410 Citrullus lanatus HOM05D007318 ORTHO05D009289 3.6e-69 265.8 267 51.3
unitig_0.g1560 Utricularia gibba HOM05D007318 ORTHO05D009289 1.0e-68 264.2 272 47.8
Psat2g020440 Pisum sativum HOM05D007318 ORTHO05D009289 1.5e-67 260.4 318 44.7
ClCG05G021760 Citrullus lanatus HOM05D007318 ORTHO05D009289 1.2e-64 250.8 186 61.8
Cfa011269 Carpinus fangiana HOM05D007318 ORTHO05D009289 2.7e-64 249.6 192 59.4
AagrBONN_evm.TU.Sc2ySwM_368.1913 Anthoceros agrestis HOM05D007318 ORTHO05D009289 1.3e-63 247.3 276 43.8
TAR636G1683 Trochodendron aralioides HOM05D007318 ORTHO05D009289 1.5e-62 243.8 176 67.6
Mapoly0020s0170 Marchantia polymorpha HOM05D007318 ORTHO05D009289 8.3e-58 228.0 238 46.2
AUR62043602 Chenopodium quinoa HOM05D007318 ORTHO05D009289 1.9e-54 216.9 181 54.7
Thecc.03G070600 Theobroma cacao HOM05D007318 ORTHO05D009289 2.1e-53 213.4 163 63.2
MBI13_g43865_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 4.7e-53 212.2 118 83.9
AUR62042079 Chenopodium quinoa HOM05D007318 ORTHO05D009289 2.3e-52 209.9 181 53.6
Glyma.02G164100 Glycine max HOM05D007318 ORTHO05D009289 3.5e-48 196.1 178 53.9
MSTRG.421 Avicennia marina HOM05D007318 ORTHO05D009289 1.7e-47 193.7 170 57.1
SMO172G0015 Selaginella moellendorffii HOM05D007318 ORTHO05D009289 4.3e-46 189.1 198 48.0
PRCOL_00002097 Prasinoderma coloniale HOM05D007318 ORTHO05D009289 1.2e-43 181.0 285 33.7
Psat6g095000 Pisum sativum HOM05D007318 ORTHO05D009289 1.5e-43 180.6 278 38.1
SEGI_17929 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 2.0e-43 180.3 135 64.4
Pp3c5_16220 Physcomitrium patens HOM05D007318 ORTHO05D009289 2.6e-43 179.9 230 42.2
ClCG00G005260 Citrullus lanatus HOM05D007318 ORTHO05D009289 5.8e-43 178.7 135 59.3
Gohir.A02G015000 Gossypium hirsutum HOM05D007318 ORTHO05D009289 3.0e-39 166.4 135 54.8
MCO07G233 Micromonas commoda HOM05D007318 ORTHO05D009289 1.6e-29 134.0 273 31.9
Lsat_1_v5_gn_5_177140 Lactuca sativa HOM05D007318 ORTHO05D009289 1.2e-27 127.9 146 49.3
SEGI_12071 Sequoiadendron giganteum HOM05D007318 ORTHO05D009289 3.2e-25 119.8 173 39.3
Dinv09612 Davidia involucrata HOM05D007318 ORTHO05D009289 6.2e-21 105.5 118 50.8
Cre07.g323750 Chlamydomonas reinhardtii HOM05D007318 ORTHO05D009289 8.1e-21 105.1 231 32.0
PGSC0003DMG400023973 Solanum tuberosum HOM05D007318 ORTHO05D009289 1.7e-18 97.4 83 57.8
MBI13_g44208_MAGBIO Magnolia biondii HOM05D007318 ORTHO05D009289 6.0e-16 89.0 40 95.0
TAR636G1493 Trochodendron aralioides HOM05D007318 ORTHO05D009289 4.9e-10 69.3 53 58.5
Glyma.20G074100 Glycine max HOM05D007318 ORTHO05D009289 7.8e-08 62.0 74 44.6
Aa31LG3G4790 Aethionema arabicum HOM05D005118 ORTHO05D006038 4.3e-06 56.2 198 26.8
AUR62006198 Chenopodium quinoa HOM05D005118 ORTHO05D006038 5.6e-06 55.8 220 21.8


User provided reference genes

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