Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MBI13_g43929_MAGBIO Magnolia biondii HOM05D002544 ORTHO05D007277 5.2e-69 264.2 130 100.0
RcHm_v2.0_Chr3g0492321 Rosa chinensis HOM05D002544 ORTHO05D007277 5.0e-40 167.9 100 80.0
Thecc.04G063800 Theobroma cacao HOM05D002544 ORTHO05D007277 1.5e-39 166.4 100 79.0
Atru.chr1.2027 Acer truncatum HOM05D002544 ORTHO05D007277 3.3e-39 165.2 100 76.0
Actinidia17195 Actinidia chinensis HOM05D002544 ORTHO05D007277 3.3e-39 165.2 101 75.2
QL02p059524 Quercus lobata HOM05D002544 ORTHO05D007277 3.3e-39 165.2 100 78.0
TAR374G1472 Trochodendron aralioides HOM05D002544 ORTHO05D007277 3.3e-39 165.2 100 79.0
MD09G1267400 Malus domestica HOM05D002544 ORTHO05D007277 4.3e-39 164.9 100 78.0
MSTRG.15655 Avicennia marina HOM05D002544 ORTHO05D007277 9.5e-39 163.7 100 78.0
LjContig00141g0018139 Lotus japonicus HOM05D002544 ORTHO05D007277 9.5e-39 163.7 100 76.0
Prupe.3G165000 Prunus persica HOM05D002544 ORTHO05D007277 1.2e-38 163.3 100 76.0
Glyma.14G212800 Glycine max HOM05D002544 ORTHO05D007277 1.6e-38 162.9 100 76.0
Ca_26386_v3 Cicer arietinum L. HOM05D002544 ORTHO05D007277 2.1e-38 162.5 100 75.0
Eucgr.F02880 Eucalyptus grandis HOM05D002544 ORTHO05D007277 2.1e-38 162.5 98 77.6
Rhsim10G0180300 Rhododendron simsii HOM05D002544 ORTHO05D007856 2.8e-38 162.2 102 72.5
Sabra04G0055200 Salix brachista HOM05D002544 ORTHO05D007856 2.8e-38 162.2 104 75.0
Migut.K00934 Erythranthe guttata HOM05D002544 ORTHO05D007277 3.6e-38 161.8 100 74.0
Lalb_Chr04g0251431 Lupinus albus HOM05D002544 ORTHO05D007277 3.6e-38 161.8 99 76.8
CAN.G733.10 Capsicum annuum HOM05D002544 ORTHO05D007277 6.2e-38 161.0 100 76.0
Manes.17G002000 Manihot esculenta HOM05D002544 ORTHO05D007277 6.2e-38 161.0 99 76.8
Glyma.02G243700 Glycine max HOM05D002544 ORTHO05D007277 8.0e-38 160.6 100 75.0
Nitab4.5_0010055g0010 Nicotiana tabacum HOM05D002544 ORTHO05D007277 8.0e-38 160.6 100 76.0
Solyc05g051230.4 Solanum lycopersicum HOM05D002544 ORTHO05D007277 8.0e-38 160.6 100 75.0
Sopen05g029600 Solanum pennellii HOM05D002544 ORTHO05D007277 8.0e-38 160.6 100 75.0
Hund02530 Selenicereus undatus HOM05D002544 ORTHO05D007277 1.1e-37 160.2 99 76.8
FvH4_1g29991 Fragaria vesca HOM05D002544 ORTHO05D007277 1.4e-37 159.8 100 76.0
FAN26G0021 Fragaria x ananassa HOM05D002544 ORTHO05D007277 1.4e-37 159.8 100 76.0
vmacro20588 Vaccinium macrocarpon HOM05D002544 ORTHO05D007277 1.4e-37 159.8 99 74.7
Cpa.g.sc116.80 Carica papaya HOM05D002544 ORTHO05D007277 1.8e-37 159.5 99 74.7
COL.COLO4_11381 Corchorus olitorius HOM05D002544 ORTHO05D007277 1.8e-37 159.5 98 77.6
ATR0021G008 Amborella trichopoda HOM05D002544 ORTHO05D007277 2.3e-37 159.1 100 75.0
Potri.004G083200 Populus trichocarpa HOM05D002544 ORTHO05D007277 4.0e-37 158.3 100 75.0
SalBow5G3645 Salvia bowleyana HOM05D002544 ORTHO05D007277 4.0e-37 158.3 97 78.4
AUR62032172 Chenopodium quinoa HOM05D002544 ORTHO05D007277 5.2e-37 157.9 98 77.6
Sed0005203 Sechium edule HOM05D002544 ORTHO05D007277 5.2e-37 157.9 99 73.7
CSS0024967 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007277 6.8e-37 157.5 100 73.0
Gohir.D11G175100 Gossypium hirsutum HOM05D002544 ORTHO05D007277 6.8e-37 157.5 100 75.0
Gorai.007G187700 Gossypium raimondii HOM05D002544 ORTHO05D007277 6.8e-37 157.5 100 75.0
GSVIVG01015995001 Vitis vinifera HOM05D002544 ORTHO05D007277 6.8e-37 157.5 100 76.0
Gohir.A11G168900 Gossypium hirsutum HOM05D002544 ORTHO05D007277 8.9e-37 157.1 100 75.0
Medtr5g077840 Medicago truncatula HOM05D002544 ORTHO05D007277 8.9e-37 157.1 100 73.0
PGSC0003DMG401014608 Solanum tuberosum HOM05D002544 ORTHO05D007277 1.2e-36 156.8 100 74.0
EL10Ac5g11231 Beta vulgaris HOM05D002544 ORTHO05D007277 1.5e-36 156.4 98 77.6
CSS0009784 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007277 1.5e-36 156.4 100 72.0
AUR62036929 Chenopodium quinoa HOM05D002544 ORTHO05D007277 1.5e-36 156.4 98 76.5
ClCG05G002460 Citrullus lanatus HOM05D002544 ORTHO05D007277 1.5e-36 156.4 99 71.7
FAN19G1253 Fragaria x ananassa HOM05D002544 ORTHO05D007277 1.5e-36 156.4 100 74.0
Lj2C517G4 Lonicera japonica HOM05D002544 ORTHO05D007277 1.5e-36 156.4 99 72.7
arahy.Tifrunner.gnm1.ann1.N8969K Arachis hypogaea HOM05D002544 ORTHO05D007277 2.0e-36 156.0 98 74.5
Ciclev10003868m.g Citrus clementina HOM05D002544 ORTHO05D007277 2.0e-36 156.0 98 75.5
Hma1.2p1_1443F.1_g283890 Hydrangea macrophylla HOM05D002544 ORTHO05D007277 2.0e-36 156.0 101 76.2
Phvul.008G237900 Phaseolus vulgaris HOM05D002544 ORTHO05D007277 2.0e-36 156.0 99 75.8
Ah.11g047270 Amaranthus hybridus HOM05D002544 ORTHO05D007277 2.6e-36 155.6 98 73.5
arahy.Tifrunner.gnm1.ann1.8QPJ7C Arachis hypogaea HOM05D002544 ORTHO05D007277 2.6e-36 155.6 98 73.5
TWI74G0587 Tripterygium wilfordii HOM05D002544 ORTHO05D007277 2.6e-36 155.6 100 75.0
Lsat_1_v5_gn_3_64121 Lactuca sativa HOM05D002544 ORTHO05D007277 3.4e-36 155.2 99 74.7
arahy.Tifrunner.gnm1.ann1.F4VH9C Arachis hypogaea HOM05D002544 ORTHO05D007277 5.8e-36 154.5 98 73.5
PGR004G1667 Punica granatum HOM05D002544 ORTHO05D007277 7.5e-36 154.1 100 72.0
QL03p020249 Quercus lobata HOM05D002544 ORTHO05D007277 7.5e-36 154.1 118 66.1
arahy.Tifrunner.gnm1.ann1.Y37JRT Arachis hypogaea HOM05D002544 ORTHO05D007277 1.3e-35 153.3 98 73.5
VMungo0647G0515 Vigna mungo HOM05D002544 ORTHO05D007277 1.3e-35 153.3 99 71.7
Aa31LG9G17540 Aethionema arabicum HOM05D002544 ORTHO05D007277 1.7e-35 152.9 98 73.5
CANSAT54G1265 Cannabis sativa HOM05D002544 ORTHO05D007277 1.7e-35 152.9 98 73.5
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 1.7e-35 152.9 98 73.5
Haze_14287 Corylus avellana HOM05D002544 ORTHO05D007277 2.2e-35 152.5 121 64.5
unitig_32.g10720 Utricularia gibba HOM05D002544 ORTHO05D007277 2.9e-35 152.1 98 74.5
PSO421G0270 Papaver somniferum HOM05D002544 ORTHO05D007277 3.7e-35 151.8 100 70.0
MELO3C006210.2 Cucumis melo HOM05D002544 ORTHO05D007277 8.3e-35 150.6 113 66.4
Thhalv10027822m.g Eutrema salsugineum HOM05D002544 ORTHO05D007277 8.3e-35 150.6 98 70.4
AL7G46290 Arabidopsis lyrata HOM05D002544 ORTHO05D007277 1.4e-34 149.8 98 70.4
BcaB06g27087 Brassica carinata HOM05D002544 ORTHO05D007277 1.4e-34 149.8 99 69.7
Sp7g04620 Schrenkiella parvula HOM05D002544 ORTHO05D007277 1.4e-34 149.8 98 70.4
Sc04g0005090 Simmondsia chinensis HOM05D002544 ORTHO05D007277 1.4e-34 149.8 99 71.7
Carub.0007s3270 Capsella rubella HOM05D002544 ORTHO05D007277 1.9e-34 149.4 98 70.4
AT5G37530 Arabidopsis thaliana HOM05D002544 ORTHO05D007277 2.4e-34 149.1 98 69.4
CDE05G0883 Ceratophyllum demersum HOM05D002544 ORTHO05D007277 4.1e-34 148.3 99 71.7
HanXRQChr16g0532851 Helianthus annuus HOM05D002544 ORTHO05D007277 4.1e-34 148.3 99 71.7
BcaC02g09580 Brassica carinata HOM05D002544 ORTHO05D007277 5.4e-34 147.9 97 70.1
C04p44390 Brassica napus HOM05D002544 ORTHO05D007277 5.4e-34 147.9 97 70.1
BolC4t26010H Brassica oleracea HOM05D002544 ORTHO05D007277 5.4e-34 147.9 97 70.1
CARHR215380 Cardamine hirsuta HOM05D002544 ORTHO05D007277 9.2e-34 147.1 98 69.4
PSO063G7385 Papaver somniferum HOM05D002544 ORTHO05D007277 9.2e-34 147.1 100 68.0
THA.LOC104823837 Tarenaya hassleriana HOM05D002544 ORTHO05D007277 9.2e-34 147.1 98 68.4
A04p10670 Brassica napus HOM05D002544 ORTHO05D007277 2.7e-33 145.6 97 69.1
BraA04t16734Z Brassica rapa HOM05D002544 ORTHO05D007277 2.7e-33 145.6 97 69.1
HPP92_021315 Vanilla planifolia HOM05D002544 ORTHO05D007277 1.5e-31 139.8 97 68.0
AagrBONN_evm.TU.Sc2ySwM_228.346 Anthoceros agrestis HOM05D002544 ORTHO05D007277 4.3e-31 138.3 103 64.1
SHI30127 Sapria himalayana HOM05D002544 ORTHO05D007277 4.7e-30 134.8 106 63.2
ECA240G4132 Erigeron canadensis HOM05D002544 ORTHO05D004529 8.1e-30 134.0 87 72.4
SGA_v2.0_scaffold45G17141 Striga asiatica HOM05D002544 ORTHO05D007277 3.4e-28 128.6 90 68.9
SMO367G0951 Selaginella moellendorffii HOM05D002544 ORTHO05D007277 5.4e-26 121.3 97 57.7
Cc07_g13190 Coffea canephora HOM05D002544 ORTHO05D007277 2.1e-22 109.4 66 77.3
Peaxi162Scf00424g00516 Petunia axillaris HOM05D002544 ORTHO05D007277 2.1e-22 109.4 65 76.9
CBR_g12327 Chara braunii HOM05D002544 ORTHO05D007277 4.7e-22 108.2 97 54.6
Duzib138G1710 Durio zibethinus HOM05D002544 ORTHO05D007277 6.2e-22 107.8 140 45.0
Mapoly0047s0092 Marchantia polymorpha HOM05D002544 ORTHO05D007277 1.8e-21 106.3 98 49.0
Aqoxy3G04065 Aquilegia oxysepala HOM05D002544 ORTHO05D007277 1.5e-12 76.6 49 73.5
Pp3c14_20390 Physcomitrium patens HOM05D002544 ORTHO05D007277 2.0e-12 76.3 96 42.7
TPR.G13780 Trifolium pratense HOM05D002544 ORTHO05D007277 2.6e-12 75.9 45 73.3
DCAR_010067 Daucus carota HOM05D002544 ORTHO05D007277 4.4e-12 75.1 49 69.4
MCO01G178 Micromonas commoda HOM05D002544 ORTHO05D007277 3.5e-09 65.5 72 40.3
PRCOL_00003184 Prasinoderma coloniale HOM05D002544 ORTHO05D007277 1.3e-08 63.5 99 34.3
Cre03.g159400 Chlamydomonas reinhardtii HOM05D002544 ORTHO05D007277 5.1e-08 61.6 107 33.6


User provided reference genes

Program Settings